prot_H-elongata_contig97819.17123.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97819.17123.1
Unique Nameprot_H-elongata_contig97819.17123.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length340
Homology
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: A0A6H5KPE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE5_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 1.530e-117
Identity = 242/339 (71.39%), Postives = 253/339 (74.63%), Query Frame = 0
Query:    2 MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGGRDSSSSLSSDEDSEEDGVGXXXXXXXXXXXXNEDEGEVEDPSPGREEDDEAEGDLAAGGRRASSKSRMREARAERVRRRRGAVASRRPEADDKVESREGRKXXXXXXXXXXXXXXXXXXXXXXXXXGVDRGGVFIDSFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCG-KDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCG  D           E     XXXXXXXXXXXX                   + GD     +  SS  R+R          RGA  +    AD K+    G K     XXXXXXXXXXXXXXXXXXX G  RGGVFI+SFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCG KDFDGCIL DECHRAKNLY AGG  +TKAGAAVVELQ KLPNAR+VYCSATGASEPRNLGYMTRLGLWGA GSPFPGGFKDFLTAV+GRGVGAMELVAMHLKQ GSFVCRTLSF GC+FE+
Sbjct:    1 MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPD-----------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRSGGDAGRQRKVPSSSGRVR----------RGAAVA----ADAKL----GNKNSEEPXXXXXXXXXXXXXXXXXXXGG--RGGVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFEL 308          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: D8LL28_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL28_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 7.350e-109
Identity = 238/340 (70.00%), Postives = 256/340 (75.29%), Query Frame = 0
Query:    1 MMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGGRDSSSSLSSDEDSEEDGVGXXXXXXXXXXXXNEDEGEVEDPSPGREEDDEAEGDLAAGGRRASSKSRMREARAERVRRRRGAVASRRPEADDKVESREGRKXXXXXXXXXXXXXXXXXXXXXXXXXGVDRGGVFIDSFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCG-KDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            +MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCG              + DG  XXXXXXXXXXXX                                 + ++  + + RVRR  GA  +    AD K+ ++   KXXXXXXXXXXXXXXXXXXXXXXXXX      VFI+SFQQNKHAYGTIRDGDGVMFLTYSSL+AANRDGKSRLKQLLKWCG +DFDGCIL DECHRAKNLY AGG  +TKAGAAVVELQ KLPNAR+VYCSATGASEPRNLGYMTRLGLWGA GSPFPGGFKDFLT V+GRGVGAMELVAMHLKQRGSFVCRTLSF GC FE+
Sbjct:  218 IMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCG--------------KPDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQCKVPSSSSGRVRR--GAAVA----ADAKLGNKNSEKXXXXXXXXXXXXXXXXXXXXXXXXX------VFIESFQQNKHAYGTIRDGDGVMFLTYSSLIAANRDGKSRLKQLLKWCGGQDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTPVDGRGVGAMELVAMHLKQRGSFVCRTLSFSGCPFEL 531          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: A0A835ZH69_9STRA (P-loop containing NTP hydrolase pore-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH69_9STRA)

HSP 1 Score: 228 bits (580), Expect = 5.120e-67
Identity = 146/346 (42.20%), Postives = 169/346 (48.84%), Query Frame = 0
Query:    1 MMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGGRDSSSSLSSDEDSEEDGVGXXXXXXXXXXXXNEDEGEVEDPSPGREEDDEAEGDLAAGGRRASSKSRMREARAERVRRRRGAVASRRPEADDKVESREGRKXXXXXXXXXXXXXXXXXXXXXXXXXGVDRGGVFIDSFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGK-----SRLKQLLKWCG-KDFDGCILFDECHRAKNLYT-AGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            M+LEN L GR KH+WISVG DLA DARRDLDD+G G R                                                                             RR  V   R                                            G +I S+   K  YG +R G GVMFLTYS+LVA    G      SRL+QL+ W G   FDGC+L DECHRAKN Y+ AG   S+++G AVVELQ +LPNARVVYCSATGASEPRNLGYMTRLGLWG  G+PFP GF+  L  V+G GVGAME++AMHLKQ G+F+CRTLSF GC FE+
Sbjct:  127 MILENTLRGRNKHIWISVGADLALDARRDLDDIGAGPR-----------------------------------------------------------------------------RRRLVGPPRTR------------------------------------------GAYIPSYPLQKAPYGNLRFGHGVMFLTYSTLVAKRPGGARGRATSRLEQLIAWAGGAAFDGCLLLDECHRAKNFYSGAGNGPSSQSGRAVVELQARLPNARVVYCSATGASEPRNLGYMTRLGLWGQ-GTPFPSGFEQLLGTVDGHGVGAMEMMAMHLKQSGAFLCRTLSFAGCGFEL 352          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: A0A7J7L1U0_9MAGN (AAA_34 domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L1U0_9MAGN)

HSP 1 Score: 204 bits (518), Expect = 6.040e-58
Identity = 98/151 (64.90%), Postives = 124/151 (82.12%), Query Frame = 0
Query:  189 DGVMFLTYSSLVAANRDGKSRLKQLLKWCGKDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            +GV+FLTYSSL+A++  G +RL+QLLKWCG  +DG ++FDECH+AKNL    G++ T+ GAAV ELQ+KLP+ARV+YCSATGASEPRNLGYM RLGLWGA G+ F   F+DFL A++  GVGA+ELVAM +K RG +VCRTLS++G  FEV
Sbjct:  109 EGVIFLTYSSLIASSEKGLTRLQQLLKWCGSGYDGLVVFDECHKAKNLVPEAGSLPTRTGAAVKELQQKLPSARVIYCSATGASEPRNLGYMVRLGLWGA-GTCF-NEFRDFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGAEFEV 257          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: F0YNP5_AURAN (AAA_34 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP5_AURAN)

HSP 1 Score: 203 bits (516), Expect = 1.300e-57
Identity = 106/178 (59.55%), Postives = 128/178 (71.91%), Query Frame = 0
Query:  166 DRGGVFIDSFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKS--RLKQLLKWCGK-DFDGCILFDECHRAKNLYT-AGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            D G   I     NK  YGT+++  GV+F TYS+L+AA +  K   RL Q+L WCG+  F GC+LFDE H+AKNL+  +GG   TK G AV+ELQ  LP+ARVVYCSATGASEPR+LGYM RLGLWG    PF   F+ FLT V+ RGVG MELVAMHLKQRG+ VCR LSF+ C+FE+
Sbjct:  174 DLGCAHIPVIPLNKCDYGTLKEKKGVIFCTYSALIAARKGKKPQRRLDQILAWCGRASFGGCLLFDESHKAKNLFGGSGGGKPTKVGQAVMELQTSLPDARVVYCSATGASEPRHLGYMDRLGLWGGDACPFAS-FRSFLTEVDKRGVGMMELVAMHLKQRGALVCRALSFKNCTFEL 350          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: A0A8J9WME0_9CHLO (Protein strawberry notch homolog 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WME0_9CHLO)

HSP 1 Score: 208 bits (529), Expect = 1.720e-56
Identity = 109/180 (60.56%), Postives = 128/180 (71.11%), Query Frame = 0
Query:  166 DRGGVFIDSFQQNKHAYGTIRDGD------GVMFLTYSSLVAANRDGKSRLKQLLKWCGKDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            D G   I     NK  YG + D D      GV+ LTYSSL++A  +G SR++Q++ WCG DFDG ++FDECH+AKNL    G+  TK G  V++LQ  LPNARVVYCSATGASEPRNLGYM RLGLWG  G+P    F DFL AV GRGVGA+ELVAM +K RG FVCRTLSF+GC FEV
Sbjct:  343 DVGATDIPLHPLNKLPYGQL-DSDKVGVKEGVVLLTYSSLISAADNGASRIQQVVDWCGPDFDGLVVFDECHKAKNLVPDSGSKPTKVGEKVLQLQRMLPNARVVYCSATGASEPRNLGYMERLGLWGV-GTPSFATFPDFLEAVGGRGVGALELVAMDMKARGMFVCRTLSFKGCEFEV 520          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: A0A2I0B8G5_9ASPA (PHD-type domain-containing protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B8G5_9ASPA)

HSP 1 Score: 207 bits (526), Expect = 4.120e-56
Identity = 104/179 (58.10%), Postives = 132/179 (73.74%), Query Frame = 0
Query:  166 DRGGVFIDSFQQNKHAYGTIRDG-----DGVMFLTYSSLVAANRDGKSRLKQLLKWCGKDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            D G + I+    NK  Y  +        DGV+FLTY+SL+A++  G+SRL+QLL+WCG DFDG I+FDECH+AKNL    G   T+ G AV+E+Q++LP ARVVYCSATGASEPRN+GYM RLGLWG  G+ FP  F+DFL A++  GVGA+ELVAM +K RG +VCRTLS++G  FEV
Sbjct:  289 DVGAILIEVHALNKLPYSKLDSKAVGIKDGVIFLTYNSLIASSERGRSRLQQLLQWCGSDFDGLIVFDECHKAKNLIPEAGGQPTRTGEAVLEIQDRLPEARVVYCSATGASEPRNMGYMVRLGLWGV-GTCFPK-FQDFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGAEFEV 465          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: D8RKZ2_SELML (PHD-type domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RKZ2_SELML)

HSP 1 Score: 207 bits (526), Expect = 4.150e-56
Identity = 106/179 (59.22%), Postives = 131/179 (73.18%), Query Frame = 0
Query:  166 DRGGVFIDSFQQNKHAYGTIRDG-----DGVMFLTYSSLVAANRDGKSRLKQLLKWCGKDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            D G   I+    NK  YG +        +GV+FLTY+SL+A++  G+SRL+QL++WCG DFDG I FDECH+AKNL    G  +T+ G AVVE+Q++LP AR+VYCSATGASEPRNLGYM RLGLWG  G+ FP  F  FL A+E RGVGA+ELVAM +K RG +VCRTLSF+G  FEV
Sbjct:  313 DIGATSIEVHALNKLPYGKLDSKAIGVKEGVIFLTYNSLIASSEKGRSRLQQLIQWCGPDFDGLITFDECHKAKNLIPDSGTHATRTGEAVVEIQKRLPEARIVYCSATGASEPRNLGYMCRLGLWGK-GTDFPH-FHAFLAALEKRGVGALELVAMDMKARGMYVCRTLSFQGAEFEV 489          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: A0A7J6HG33_CANSA (PHD-type domain-containing protein n=4 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6HG33_CANSA)

HSP 1 Score: 207 bits (526), Expect = 4.200e-56
Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 0
Query:  189 DGVMFLTYSSLVAANRDGKSRLKQLLKWCGKDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            +GV+FLTYSSL+A++  G+SRL+QL++WCG DFDG I+FDECH+AKNL    G+  T+ G AVVE+Q++LP ARVVYCSATGASEPRN+GYM RLGLWGA G+ F   FKDFL A+E  GVGA+ELVAM +K RG +VCRTLS++G  FEV
Sbjct:  375 EGVIFLTYSSLIASSEKGRSRLQQLVQWCGPDFDGLIIFDECHKAKNLVPEAGSQPTRTGEAVVEIQDQLPEARVVYCSATGASEPRNMGYMVRLGLWGA-GTSFLD-FKDFLGALEKGGVGALELVAMDMKARGMYVCRTLSYKGAEFEV 523          
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Match: A0A251V8M3_HELAN (Putative RING/FYVE/PHD zinc finger superfamily protein n=4 Tax=Helianthus annuus TaxID=4232 RepID=A0A251V8M3_HELAN)

HSP 1 Score: 206 bits (525), Expect = 5.550e-56
Identity = 106/179 (59.22%), Postives = 132/179 (73.74%), Query Frame = 0
Query:  166 DRGGVFIDSFQQNKHAYGTIRDG-----DGVMFLTYSSLVAANRDGKSRLKQLLKWCGKDFDGCILFDECHRAKNLYTAGGAVSTKAGAAVVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDFLTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV 339
            D G   I+    NK +Y  +        +GV+FLTYSSL+A++  G+SRL+QL++WCG D+DG I+FDECH+AKNL    G   T+ G AV+ELQ KLP ARVVYCSATGASEPRNLGYM RLGLWGA G+ F G F+DFL A++  GVGA+ELVAM +K RG +VCRTLS++G  FEV
Sbjct:  274 DVGATCIEVHALNKLSYSKLDSKSVGIREGVVFLTYSSLIASSEKGRSRLQQLVQWCGLDYDGLIVFDECHKAKNLVPEAGGQPTRTGEAVLELQAKLPEARVVYCSATGASEPRNLGYMVRLGLWGA-GTSFEG-FRDFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGVEFEV 450          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97819.17123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPE5_9PHAE1.530e-11771.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL28_ECTSI7.350e-10970.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZH69_9STRA5.120e-6742.20P-loop containing NTP hydrolase pore-1-domain-cont... [more]
A0A7J7L1U0_9MAGN6.040e-5864.90AAA_34 domain-containing protein n=1 Tax=Kingdonia... [more]
F0YNP5_AURAN1.300e-5759.55AAA_34 domain-containing protein (Fragment) n=1 Ta... [more]
A0A8J9WME0_9CHLO1.720e-5660.56Protein strawberry notch homolog 1 n=1 Tax=Coccomy... [more]
A0A2I0B8G5_9ASPA4.120e-5658.10PHD-type domain-containing protein n=1 Tax=Apostas... [more]
D8RKZ2_SELML4.150e-5659.22PHD-type domain-containing protein n=3 Tax=Selagin... [more]
A0A7J6HG33_CANSA4.200e-5666.23PHD-type domain-containing protein n=4 Tax=Cannabi... [more]
A0A251V8M3_HELAN5.550e-5659.22Putative RING/FYVE/PHD zinc finger superfamily pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039187Strawberry notch, AAA domainPFAMPF13872AAA_34coord: 173..339
e-value: 1.9E-67
score: 227.3
coord: 2..38
e-value: 1.3E-9
score: 37.4
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 2..52
coord: 188..339
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 184..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97819contigH-elongata_contig97819:250..2320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97819.17123.1mRNA_H-elongata_contig97819.17123.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97819 250..2347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97819.17123.1 ID=prot_H-elongata_contig97819.17123.1|Name=mRNA_H-elongata_contig97819.17123.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=340bp
MMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGGRDSSSSLSSDEDS
EEDGVGDSEEDGVGESDENEDEGEVEDPSPGREEDDEAEGDLAAGGRRAS
SKSRMREARAERVRRRRGAVASRRPEADDKVESREGRKRKREQKEKVYIS
HKASAGAGRGAGLGVDRGGVFIDSFQQNKHAYGTIRDGDGVMFLTYSSLV
AANRDGKSRLKQLLKWCGKDFDGCILFDECHRAKNLYTAGGAVSTKAGAA
VVELQEKLPNARVVYCSATGASEPRNLGYMTRLGLWGATGSPFPGGFKDF
LTAVEGRGVGAMELVAMHLKQRGSFVCRTLSFRGCSFEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039187SNO_AAA
IPR026741SNO
IPR027417P-loop_NTPase