prot_H-elongata_contig9772.17115.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9772.17115.1
Unique Nameprot_H-elongata_contig9772.17115.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length143
Homology
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BLAST of mRNA_H-elongata_contig9772.17115.1 vs. uniprot
Match: A0A6H5KRR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 5.460e-27
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0 
Query:    1 MEGAMEAVNSFVKTAPTFIAKVQAGNRGGVTQTVHCPVHLLPSIQRLSRKIQLESGTNYVFANSKMSTF 69
            +EGAME VN+FVKTAPTFIAK Q+ + GGVTQTV CPVHLLPSIQRLSRKIQ ESG N VFAN K+  F
Sbjct:   59 LEGAMETVNNFVKTAPTFIAKAQSTSGGGVTQTVQCPVHLLPSIQRLSRKIQAESGANCVFANCKVRPF 127
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BLAST of mRNA_H-elongata_contig9772.17115.1 vs. uniprot
Match: D7FXX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX3_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 2.230e-25
Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 0 
Query:    1 MEGAMEAVNSFVKTAPTFIAKVQAGNRGGVTQTVHCPVHLLPSIQRLSRKIQLESGTNYVFANSKMSTFCVT 72
            +EGAME VN FVKTAPTFIAK Q+ + GGVTQTV CPV+LLPSIQRLSRKIQ ESG N VFAN K+  F  T
Sbjct:  140 VEGAMETVNDFVKTAPTFIAKAQSTSGGGVTQTVQCPVNLLPSIQRLSRKIQAESGANCVFANCKVRPFSTT 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9772.17115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRR8_9PHAE5.460e-2776.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXX3_ECTSI2.230e-2573.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9772contigH-elongata_contig9772:2367..4102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9772.17115.1mRNA_H-elongata_contig9772.17115.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9772 2367..4118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9772.17115.1 ID=prot_H-elongata_contig9772.17115.1|Name=mRNA_H-elongata_contig9772.17115.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
MEGAMEAVNSFVKTAPTFIAKVQAGNRGGVTQTVHCPVHLLPSIQRLSRK
IQLESGTNYVFANSKMSTFCVTGDRQNVDEAVRILKRLIAEGNSEMLAAS
FNANGAVGDGDARGERRGPGSGSSSNSSRGWRETAHRLFREGS
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