prot_H-elongata_contig97570.17109.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97570.17109.1
Unique Nameprot_H-elongata_contig97570.17109.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length279
Homology
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: A0A6H5JIJ1_9PHAE (DUF4205 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ1_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 2.690e-74
Identity = 151/311 (48.55%), Postives = 185/311 (59.49%), Query Frame = 0
Query:    4 IWTA----SAFLAIPDGNSTLQRSSRYRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKV---------HGVVLLVYSCMLSRGLDTVRDDMDNNFGEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVI-DSGGDKTEGPGHGVVFRENN-----------------DRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSADVSITLMPSKDVIKGAAEKISKNESPGTAGGENASEPVQEGGVSGDRQG---------C--VVEDPQSFELEYYDGLARQDKV 272
            IW A    +A LA+ +G +T+Q SSRYRPDG TERLKL R  S +A+E ++  N HH+ + KV          GV+LLVYSC+ SRG+D VR DMDN+F EP  L+  HGYASQELVNLLL+GRA SNVFDG RV+ D GG    G G    + +                   DR+VL G   RGRVGFLTLFEAY HVEVG+ LK PE P+WVVCSESHYSVLFS D +I   P   +   A  + S+ +  G +GG  A   V   G SG   G         C    +  ++F+LEYYDGL RQD+ 
Sbjct:  397 IWRAGDGNTAVLAVSEGGATVQPSSRYRPDGFTERLKLIRVGSRSALEGVLRDNLHHYTNYKVTWGPCMKKGQGVILLVYSCVFSRGVDAVRGDMDNSFDEPPPLMASHGYASQELVNLLLVGRARSNVFDGCRVMGDEGGGSKAGAGGKKGYEDRKRGQKQGHQKEEGEGGGGDRVVLTGVSERGRVGFLTLFEAYKHVEVGDRLKNPETPIWVVCSESHYSVLFSVDSAIVPAPQPTI---ATREDSERQLAGGSGGATAKS-VPAAGRSGRGNGGSAASGHGSCGRETDGAEAFDLEYYDGLGRQDET 703          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: D8LK40_ECTSI (DUF4205 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK40_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 3.980e-72
Identity = 148/305 (48.52%), Postives = 180/305 (59.02%), Query Frame = 0
Query:    4 IWTA----SAFLAIPDGNSTLQRSSRYRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNFGEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVI--DSGGDKT-----EG---------PGHGVVFREN--NDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSADVSIT--------------LMPSKDVIKGAAEKISKNESPGTAGGENASEPVQEGGVSGDRQGCVVEDPQSFELEYYDGLARQDKV 272
            IW+A    +A LA+ +G +T+QRSSRYRPDG TER+KL    S +A+E +V  N HH+ ++K  GV+LLVYSC+ SRG+D VR DMDN+F EP  L+  HGYASQELVNLLL+GRA SNVFDG RV+  + GG K      EG          GH     E   +DR+VL G   RGRVGFLTLFEAY HVEVG+ LK PE P+WVVCSESHYSVLF  D SI                          A+      S G   G +A+     GG   D         ++F+LEYYDGL RQD+ 
Sbjct:  425 IWSAGDGNTAVLAVSEGGATVQRSSRYRPDGFTERVKLIHVGSRSALEGVVRDNLHHYTNRKGQGVILLVYSCVFSRGVDAVRGDMDNSFDEPSPLMASHGYASQELVNLLLVGRARSNVFDGCRVMGGEGGGAKAGAGGKEGCEDGERGQKQGHQKEEDEGGGDDRVVLRGVSERGRVGFLTLFEAYKHVEVGDRLKNPETPIWVVCSESHYSVLFGVDSSIVPXXXXXXXXXXXXXXXXXXXXXXATAKSAPAAGSSGRGNGGSAASGYGSGGRETDGA-------EAFDLEYYDGLGRQDET 722          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: A0A7S3UTT5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTT5_HETAK)

HSP 1 Score: 160 bits (404), Expect = 1.430e-44
Identity = 84/177 (47.46%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   26 YRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNN-FGEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSAD 201
            Y+PDG+TER   +   S  A+ A +  +   F   +  G V LVY   LSRGL     DMD    GEP  L+ RHGYASQE+VNLLL+G A+SNVFDG++ ++                E +D + L G P +  +GFLTLFEAY++V VG N KTPE P+WV+CSESHYS +FS D
Sbjct:    5 YKPDGLTERCHCYEFASRGALGAFLRAHLAEFASPRGPGAVCLVYGACLSRGLAAAAGDMDGGPLGEPPLLMSRHGYASQEMVNLLLIGNAYSNVFDGEQTMEG---------------EGSDVIRLRGNPGKSEIGFLTLFEAYDYVLVGQNYKTPEHPIWVICSESHYSTIFSTD 166          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: A0A7S2E179_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E179_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.790e-43
Identity = 94/204 (46.08%), Postives = 128/204 (62.75%), Query Frame = 0
Query:   11 LAIPDGNSTLQRSSRYRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNFG-EPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVI--DSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSADVSITLMPSKD 211
            L IP     + RSS + PDGVTERL++  A S + + +LV  +   FM  + +GVVLL+YS +L+RG+  VR DMD  FG E  +LI  HGY SQE VNL+L GR  SNVFDG+R +  D GG              ++D + L G  ++G VGFLTL EAYN++EVG   K P+ P+WV+ SESHYSV+F+ +  ++ + S D
Sbjct:   27 LCIPRKMPHISRSSAFTPDGVTERLEVLSASSRDELLSLVHQHLTTFMHPEGYGVVLLLYSIILTRGVGQVRSDMDKGFGGEKRSLIDNHGYLSQEGVNLILSGRGVSNVFDGERTLEDDIGG--------------SDDVIRLGGVTSQGPVGFLTLQEAYNYLEVGECYKYPKRPIWVIYSESHYSVMFATEPQLSQLRSID 216          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: A0A7S2RM61_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM61_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.620e-39
Identity = 89/196 (45.41%), Postives = 115/196 (58.67%), Query Frame = 0
Query:    8 SAFLAIPDGNSTLQRSSRYRPDGVTERLKLHRALSWNA-MEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNF-GEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSAD 201
            +A L +P G+S   R   Y+PDGVT+RL+L + L+    + A +  +       K  G + L+ + + SRG+D VR DMD  F GE  +L+  HGY SQE VNLLL+G A SNVFDG R +    D+ +G           D + L G P R  VGFLTL EAYN+ +VG N K P  P WVV SESHYSV+FS D
Sbjct:  338 TACLCVPWGSSGTDRGPGYQPDGVTDRLRLIQGLTCEEEVRAAIEDHLDALTASKGRGAIALLAAAIYSRGIDRVRTDMDEGFAGETRSLLDHHGYLSQEGVNLLLVGTASSNVFDGHRTLH---DEVQG---------TQDTVTLGGVPERSEVGFLTLHEAYNYFQVGKNFKEPHRPAWVVYSESHYSVMFSED 521          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: A0A8J4Y5A3_CHIOP (Ubiquitin carboxyl-terminal hydrolase MINDY n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4Y5A3_CHIOP)

HSP 1 Score: 142 bits (358), Expect = 1.460e-37
Identity = 82/208 (39.42%), Postives = 118/208 (56.73%), Query Frame = 0
Query:    4 IWTAS----AFLAIPDG--NSTLQRSSRYRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNFGEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSADVSIT 205
            +W A     A LA+P    + T     RY  DG+TE L LH  +    +   V  + + F  +   G V+L+YS +L+RG++ ++ DMD   G    LI  HGY+SQE+VNLLL GRA +N F+G+  + +  ++T               +VL G   +G +G L+LFE Y+  +VG +LKTP+ P+WVVC ESHYS LFS D S+T
Sbjct:   39 LWKAGQGEKAILAMPGSFAHFTEHGVGRYSQDGMTENLTLHEFVEQRVLYEAVTRHINAFTSEASSGCVVLLYSLVLTRGVENIQGDMDPGGGH---LINSHGYSSQEIVNLLLTGRAFTNTFNGEHRLGNTPEQT---------------MVLRGITQKGEIGLLSLFEHYDCYKVGTHLKTPQYPLWVVCCESHYSCLFSRDTSVT 228          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: UPI001EB0133C (probable ubiquitin carboxyl-terminal hydrolase MINDY-4 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0133C)

HSP 1 Score: 143 bits (360), Expect = 7.620e-37
Identity = 79/200 (39.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query:    4 IWTASAF----LAIPDGNSTLQRSSRYRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNFGEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFS 199
            +W A  F    +++P G   +  S++++ D +TE L L+    +  + + +  +   F     +GV+L++YS +LSRGLD VR D+D   G+   L+  HGY +QE+VNLLL GRA +NVF+    +DSG D+                 +L G  AR  +GFL+LFE Y   +VG   KTP+ P+WVVCSESH+SVLFS
Sbjct:   95 LWRAGDFKKSVVSMPSGRPHVLASAKFKHDNLTETLTLYTFTKYEELLSFMKQSISQFELDGNNGVILVLYSALLSRGLDRVRGDLDETDGK---LMAAHGYCTQEMVNLLLTGRAVANVFNDVMELDSGNDQV---------------TILKGVHARSDIGFLSLFEHYKSCQVGTYYKTPKFPIWVVCSESHFSVLFS 276          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: A0A8B8A5I2_CRAVI (Ubiquitin carboxyl-terminal hydrolase MINDY n=4 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8A5I2_CRAVI)

HSP 1 Score: 147 bits (371), Expect = 1.790e-36
Identity = 83/194 (42.78%), Postives = 116/194 (59.79%), Query Frame = 0
Query:    8 SAFLAIPDGNSTLQR-SSRYRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNFGEP-GTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFS 199
            +A +AI  G +  Q  +++YR D +TE L L+   S++ +   +  N HHFM     GV+L +YS + SR +D VR+DMD    EP G L+  HGY +Q++VNL L G+A+SNVF+ K  +DSG                +D  +L G   R  +G L+LFE Y   +VG  LKTP+ P+WVVCSESH+SVLFS
Sbjct:  468 TAVVAIGSGKAVFQGGATKYRADDITETLMLNHFKSYDDLLNFLRQNVHHFMTDGTGGVILTLYSVIFSRYIDQVREDMD----EPTGKLMGAHGYCTQDMVNLYLTGKANSNVFNDKIELDSG--------------TGSDVTILKGVSGRSNIGLLSLFEHYKSCQVGTYLKTPKYPIWVVCSESHFSVLFS 643          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: A0A7S2R941_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R941_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.920e-36
Identity = 86/194 (44.33%), Postives = 115/194 (59.28%), Query Frame = 0
Query:    7 ASAFLAIPDGNSTLQRSSR-YRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNF-GEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLF 198
            A   + +PD       SSR YR DGV +++ ++   S   + +LV  +   FM K   G V+L+ S +LSRG   +++D D+   G+  +LI  H YA QELVNL+L+G A SNVFDG R +                 E++D +VL G   +G+VGFLTLFE Y HV+VG  LKTP  P+WVVCSESHYSVLF
Sbjct:  249 ARLCIHVPDLTGPASCSSRDYRADGVIDKMLVYATTSKAQLSSLVEEHIGLFMQKSGPGTVMLLTSLILSRGGVNIKNDFDSAILGDGISLIGNHNYAGQELVNLMLVGYACSNVFDGTRSLS----------------EDDDSVVLRGIQGQGKVGFLTLFEHYEHVQVGAFLKTPVFPIWVVCSESHYSVLF 426          
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Match: UPI00201F2B4D (probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X3 n=4 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F2B4D)

HSP 1 Score: 147 bits (370), Expect = 1.940e-36
Identity = 80/205 (39.02%), Postives = 121/205 (59.02%), Query Frame = 0
Query:    4 IWTASAF----LAIPDGNSTLQRSSRYRPDGVTERLKLHRALSWNAMEALVCHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNFGEPGTLIVRHGYASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLVLMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSADVSI 204
            +W A  F    +++P G   +  S++++ D +TE L L+  + +  + + +  +   F     +GV+L++YS +LSRGLD VR D+D   G+   L+  HGY +QE+VNLLL GRA +NVF+    +DSG D+                 +L G  AR  +GFL+LFE Y   +VG   KTP+ P+WVVCSESH+SVLF+A +S+
Sbjct:  485 LWRAGDFKKSVVSMPSGRPHVLASAKFKHDNLTETLTLYTFMKYEELLSFMKQSISQFELDGNNGVILVLYSALLSRGLDRVRGDLDETDGK---LMAAHGYCTQEMVNLLLTGRAVANVFNDVMELDSGNDQV---------------TILKGVHARSDIGFLSLFEHYKSCQVGTYYKTPKFPIWVVCSESHFSVLFTASLSM 671          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97570.17109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIJ1_9PHAE2.690e-7448.55DUF4205 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LK40_ECTSI3.980e-7248.52DUF4205 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3UTT5_HETAK1.430e-4447.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2E179_9STRA1.790e-4346.08Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2RM61_9STRA1.620e-3945.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J4Y5A3_CHIOP1.460e-3739.42Ubiquitin carboxyl-terminal hydrolase MINDY n=1 Ta... [more]
UPI001EB0133C7.620e-3739.50probable ubiquitin carboxyl-terminal hydrolase MIN... [more]
A0A8B8A5I2_CRAVI1.790e-3642.78Ubiquitin carboxyl-terminal hydrolase MINDY n=4 Ta... [more]
A0A7S2R941_9STRA1.920e-3644.33Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
UPI00201F2B4D1.940e-3639.02probable ubiquitin carboxyl-terminal hydrolase MIN... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025257Domain of unknown function DUF4205SMARTSM01174DUF4205_3coord: 2..249
e-value: 3.6E-22
score: 89.6
IPR025257Domain of unknown function DUF4205PFAMPF13898DUF4205coord: 8..202
e-value: 3.4E-52
score: 177.5
IPR039785Ubiquitin carboxyl-terminal hydrolase MINDY-3/4PANTHERPTHR12473UNCHARACTERIZEDcoord: 16..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97570contigH-elongata_contig97570:534..2022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97570.17109.1mRNA_H-elongata_contig97570.17109.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97570 534..2022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97570.17109.1 ID=prot_H-elongata_contig97570.17109.1|Name=mRNA_H-elongata_contig97570.17109.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=279bp
MGDIWTASAFLAIPDGNSTLQRSSRYRPDGVTERLKLHRALSWNAMEALV
CHNFHHFMDKKVHGVVLLVYSCMLSRGLDTVRDDMDNNFGEPGTLIVRHG
YASQELVNLLLLGRAHSNVFDGKRVIDSGGDKTEGPGHGVVFRENNDRLV
LMGAPARGRVGFLTLFEAYNHVEVGNNLKTPEAPVWVVCSESHYSVLFSA
DVSITLMPSKDVIKGAAEKISKNESPGTAGGENASEPVQEGGVSGDRQGC
VVEDPQSFELEYYDGLARQDKVRSVGPW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025257DUF4205
IPR039785MINY3/4