prot_H-elongata_contig122333.1708.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122333.1708.1
Unique Nameprot_H-elongata_contig122333.1708.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122333.1708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 3..32
e-value: 4.1E-4
score: 29.7
coord: 36..60
e-value: 2.2
score: 17.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 3..35
score: 12.369
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 36..60
score: 11.728
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 5..59
e-value: 4.9E-15
score: 55.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..60
score: 23.047
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..60
e-value: 1.4E-23
score: 85.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..60
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 6..60
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 6..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122333contigH-elongata_contig122333:832..1262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122333.1708.1mRNA_H-elongata_contig122333.1708.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122333 832..1262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122333.1708.1 ID=prot_H-elongata_contig122333.1708.1|Name=mRNA_H-elongata_contig122333.1708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
DGVEHTPLVWACRRGHTEMVNLLLSKGAHIDVQDKNERTPLHEAARHGHK
DICALLLKRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf