prot_H-elongata_contig96999.17073.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96999.17073.1
Unique Nameprot_H-elongata_contig96999.17073.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length169
Homology
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: D7FW56_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW56_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 7.650e-112
Identity = 152/168 (90.48%), Postives = 166/168 (98.81%), Query Frame = 0
Query:    1 QVGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            +VGELVGACR+++FTDM+VVQETRGEPDGLIVCHLPLGPTA+FTLSNCVLRHDIADRGTVSEVYPHLIFDKF+TPLGQRVADVLKYLFPVPK DS+RVMTFSNEED++YFRHHMYEK+GGKE++LHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRP+MNSSK RRFL
Sbjct:  119 KVGELVGACRSSEFTDMIVVQETRGEPDGLIVCHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIFDKFSTPLGQRVADVLKYLFPVPKADSRRVMTFSNEEDVLYFRHHMYEKRGGKEMVLHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPYMNSSKKRRFL 286          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: A0A835ZEG9_9STRA (Anticodon-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG9_9STRA)

HSP 1 Score: 263 bits (671), Expect = 5.880e-86
Identity = 121/169 (71.60%), Postives = 147/169 (86.98%), Query Frame = 0
Query:    1 QVGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGG-KEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            +V  L+ A R NDFTD+VVVQETRGEPDGL+VCHLPLGPTAYFTLSNCVLRHDI +RGT+SE YPH+I   F+T LG R AD+LKYLFPVPK +S+R +TF+N+ D I FRHH++E+KGG KEV L EVGPRFEMQLYQ++LGT+DQ+EA+NEWV+RP+MNS+K RR+L
Sbjct:  121 KVSGLIDAARQNDFTDVVVVQETRGEPDGLLVCHLPLGPTAYFTLSNCVLRHDIPNRGTMSEAYPHMILHGFSTALGARTADILKYLFPVPKPESKRAITFANDSDFISFRHHVWERKGGSKEVTLKEVGPRFEMQLYQIKLGTVDQLEADNEWVLRPYMNSAKRRRYL 289          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: A0A0P1AMH6_PLAHL (U3 small nucleolar ribonucleoprotein protein imp4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMH6_PLAHL)

HSP 1 Score: 249 bits (635), Expect = 1.600e-80
Identity = 115/167 (68.86%), Postives = 144/167 (86.23%), Query Frame = 0
Query:    2 VGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            VG+LV + RANDFTD+++V ETRGEPDGL+VCHLP GP+AYF+LSN VLRHDI DR TVSE YPHLI ++F TPLGQRVA++LK+LFPVPK D++RV+TFSN+ D + FRHH++ K  G++V L E GPRFE+QLYQ++LGTL+Q EAENEWV+RP+MNS+K RR L
Sbjct:  122 VGDLVESARANDFTDLLLVTETRGEPDGLVVCHLPYGPSAYFSLSNTVLRHDIEDRATVSEAYPHLIINQFATPLGQRVANILKHLFPVPKPDAKRVITFSNDNDFVSFRHHVF-KVTGRDVELQECGPRFELQLYQVKLGTLEQKEAENEWVLRPYMNSAKKRRVL 287          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: A0A067BWM8_SAPPC (Brix domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BWM8_SAPPC)

HSP 1 Score: 249 bits (635), Expect = 1.600e-80
Identity = 112/167 (67.07%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    2 VGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            +G+LV + RAN+FTD+V++ ETRGEPDGL+VCHLP GPTAYF+L N V+RHDI DR TVSE YPH+I DKF T +GQRV ++LKYLFPVPK DS+RV+TFSN +D + FRHH++ KK G+EV L E GPRFE+QLYQ++LGTL+Q EAENEWV+RP+MN++K RR +
Sbjct:  122 IGDLVESARANEFTDLVMITETRGEPDGLVVCHLPYGPTAYFSLQNVVMRHDIEDRATVSEAYPHIILDKFNTSMGQRVGNILKYLFPVPKPDSKRVITFSNTDDFLSFRHHVF-KKTGREVELQECGPRFELQLYQIKLGTLEQKEAENEWVLRPYMNTAKKRRVI 287          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: A0A024U1X5_9STRA (Brix domain-containing protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024U1X5_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.300e-77
Identity = 110/169 (65.09%), Postives = 143/169 (84.62%), Query Frame = 0
Query:    2 VGELVGACRANDFTDMVVVQETRGEP--DGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            VG+LV + RAN+FTD+V++ ETRGEP  DGL+VCHLP GPTAYF+L N V+RHDI DR T+SE YPH+I ++F TPLGQRV ++LK+LFPVPK DS+RV+TFSN++D + FRHH++ KK G+EV L E GPRFE+QLYQ++LGT DQ EAENEWV+RP+MN++K R+ +
Sbjct:  122 VGDLVESARANEFTDLVIITETRGEPATDGLVVCHLPYGPTAYFSLQNVVMRHDIEDRATISEAYPHIILNQFETPLGQRVGNILKHLFPVPKPDSKRVITFSNQDDFLSFRHHVF-KKTGREVDLLECGPRFELQLYQIKLGTFDQKEAENEWVLRPYMNTAKKRKVI 289          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: K3WK67_GLOUD (Brix domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3WK67_GLOUD)

HSP 1 Score: 241 bits (616), Expect = 1.470e-77
Identity = 112/167 (67.07%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    2 VGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            VG+LV + R++D+TD+V+V ETRGEPDGL+V HLP GPTAYF+LSN VLRHDI DR T+SE YPH+I ++F T LG+RV+++LK+LFPVPK DS+RV+TFSN+ D I FRHH++ KK G++V L E GPRFE+QLYQL+LGT DQ EAENEWV+RP+MNS+K RR L
Sbjct:  128 VGDLVESARSHDYTDLVIVTETRGEPDGLVVSHLPYGPTAYFSLSNTVLRHDIEDRATISEAYPHIILNQFETVLGKRVSNILKHLFPVPKPDSKRVITFSNDNDFISFRHHVF-KKTGRDVELQECGPRFELQLYQLKLGTCDQKEAENEWVLRPYMNSAKKRRVL 293          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: A0A024FYN4_9STRA (Brix domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYN4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.830e-76
Identity = 109/164 (66.46%), Postives = 137/164 (83.54%), Query Frame = 0
Query:    5 LVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            LV + R+N+F+D+++V ETRGEPDGL+VCHLP GPTAYF+LSN VLRHDI DR T+SE YPHLI ++F T LG+RVA +LK+LFPVPK DS+RV+TF+N+ D I FRHH + K+G K+V L E GPRFE+QLYQ++LGT DQ EAENEWV+RP+MNS+K R  L
Sbjct:  125 LVESARSNEFSDLILVTETRGEPDGLVVCHLPFGPTAYFSLSNTVLRHDIEDRATISEAYPHLILNQFETALGRRVASILKHLFPVPKTDSKRVITFANDHDFISFRHHTFRKQG-KQVELSECGPRFELQLYQIKLGTCDQKEAENEWVLRPYMNSAKNRNHL 287          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: D8T4Y1_SELML (Brix domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T4Y1_SELML)

HSP 1 Score: 238 bits (606), Expect = 4.540e-76
Identity = 110/171 (64.33%), Postives = 141/171 (82.46%), Query Frame = 0
Query:    2 VGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADR---GTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGG-KEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            + E+V +CRA+DFTD+++V E RGEPDGLIVCHLP GPTAYF L N V RHDI D+   GT+SE YPHLI + F T LG R +++LKYLFPVPK DS+R++TF+N++D I FRHH+YEK+GG K + L EVGPRFE++LYQ++LGT+DQVEA+NEWV+RP+MNSS+ R  L
Sbjct:  121 IAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMNVVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFPVPKPDSKRLITFANQQDYISFRHHVYEKQGGVKSIELKEVGPRFELRLYQIKLGTVDQVEAQNEWVIRPYMNSSRKRAAL 291          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: UPI00106B72CA (U3 small nucleolar ribonucleoprotein protein IMP4-like n=2 Tax=Alcyoniina TaxID=723662 RepID=UPI00106B72CA)

HSP 1 Score: 237 bits (604), Expect = 8.060e-76
Identity = 106/167 (63.47%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    2 VGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPFMNSSKTRRFL 168
            + +LV ACRAND TD+++  E RGEPDGL+VCHLP GPTAYFTLSN V+RHDI + GT+SEV+PHLIFDKF++ LG+RV ++LKYLFPVPK +S+RV+TF+N++D I FRHH Y+K  GK + L E+GPRFEM++Y++RLGT+DQ EA+ EW ++P+MN++K R+FL
Sbjct:  121 MSQLVQACRANDVTDLIIAHEHRGEPDGLVVCHLPYGPTAYFTLSNTVMRHDIPNIGTMSEVFPHLIFDKFSSKLGERVKNILKYLFPVPKDESKRVITFANQDDYISFRHHSYKKVEGK-IELSEIGPRFEMKVYEIRLGTVDQTEADVEWRLKPYMNTAKKRKFL 286          
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Match: UPI001E1D855B (U3 small nucleolar ribonucleoprotein protein IMP4-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D855B)

HSP 1 Score: 237 bits (604), Expect = 9.420e-76
Identity = 108/170 (63.53%), Postives = 140/170 (82.35%), Query Frame = 0
Query:    1 QVGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVLRHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMTFSNEEDIIYFRHHMYEK-KGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAEN-EWVMRPFMNSSKTRRFL 168
            ++ +LV ACRAND TD+++VQE RG PDGL++CHLP GPTAYF LSN V+RHDI D GT+SE YPHLIF+ F++ LG RV  +LKYL+PVPK DS+R+MTFSN++D I FRHH+Y+K  GGK++ L EVGPRFEM++YQ+ LGTLD V + + EWV RP+MN++K R+FL
Sbjct:  120 EIKQLVDACRANDVTDLILVQEHRGVPDGLVICHLPYGPTAYFNLSNVVMRHDIPDTGTMSEAYPHLIFNNFSSKLGNRVKSILKYLYPVPKEDSRRIMTFSNDDDFISFRHHVYKKVDGGKDIELEEVGPRFEMKVYQIILGTLDTVSSSDVEWVYRPYMNTAKKRKFL 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96999.17073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW56_ECTSI7.650e-11290.48Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZEG9_9STRA5.880e-8671.60Anticodon-binding protein n=1 Tax=Tribonema minus ... [more]
A0A0P1AMH6_PLAHL1.600e-8068.86U3 small nucleolar ribonucleoprotein protein imp4 ... [more]
A0A067BWM8_SAPPC1.600e-8067.07Brix domain-containing protein n=3 Tax=Saprolegnia... [more]
A0A024U1X5_9STRA1.300e-7765.09Brix domain-containing protein n=8 Tax=Aphanomyces... [more]
K3WK67_GLOUD1.470e-7767.07Brix domain-containing protein n=21 Tax=Oomycota T... [more]
A0A024FYN4_9STRA2.830e-7666.46Brix domain-containing protein n=1 Tax=Albugo cand... [more]
D8T4Y1_SELML4.540e-7664.33Brix domain-containing protein n=3 Tax=Selaginella... [more]
UPI00106B72CA8.060e-7663.47U3 small nucleolar ribonucleoprotein protein IMP4-... [more]
UPI001E1D855B9.420e-7663.53U3 small nucleolar ribonucleoprotein protein IMP4-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainSMARTSM00879Brix_2coord: 2..139
e-value: 7.5E-22
score: 88.6
IPR007109Brix domainPFAMPF04427Brixcoord: 10..137
e-value: 5.1E-24
score: 85.4
IPR007109Brix domainPROSITEPS50833BRIXcoord: 1..145
score: 33.7
NoneNo IPR availableGENE3D3.40.50.10480coord: 1..134
e-value: 2.9E-5
score: 25.8
NoneNo IPR availablePANTHERPTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4coord: 2..167
NoneNo IPR availablePANTHERPTHR22734:SF2U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4coord: 2..167
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 2..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96999contigH-elongata_contig96999:444..2431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96999.17073.1mRNA_H-elongata_contig96999.17073.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96999 444..2431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96999.17073.1 ID=prot_H-elongata_contig96999.17073.1|Name=mRNA_H-elongata_contig96999.17073.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
QVGELVGACRANDFTDMVVVQETRGEPDGLIVCHLPLGPTAYFTLSNCVL
RHDIADRGTVSEVYPHLIFDKFTTPLGQRVADVLKYLFPVPKMDSQRVMT
FSNEEDIIYFRHHMYEKKGGKEVILHEVGPRFEMQLYQLRLGTLDQVEAE
NEWVMRPFMNSSKTRRFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix