prot_H-elongata_contig96993.17072.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96993.17072.1
Unique Nameprot_H-elongata_contig96993.17072.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length182
Homology
BLAST of mRNA_H-elongata_contig96993.17072.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 4.600e-47
Identity = 84/201 (41.79%), Postives = 115/201 (57.21%), Query Frame = 0
Query:    4 PPICAMAAARRARALQKCRKLRTWVRHLVEEPFKHKCKTWITGTNTWMNTYEHRLAFLSIAESPEGIKEAGGWVNIPPKAFSRCLA-----------------DY-----EKSRLTRTKTGGYPEFSIGIALIIKCRLGGFWGAKRMVFVGLIPGEWARKCPCCEGRHSETLQHALLECPRWADGRGALLAPLIEEAKTLI 182
            PPICA AAARRAR +QK  KL+TW+  ++ +P+KH+  TW TGT  WMN Y HRLA  +  + P  ++  GGW+ + P+  SRC+                  DY     E + L   +  G+     G+ALII+CR+GGFWGA R+   G+I   + R CPCC+ R  E L H L +CP W++ R  LLAPLI  A  ++
Sbjct:  930 PPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRPGGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEARNGLLAPLIAAANAIV 1130          
BLAST of mRNA_H-elongata_contig96993.17072.1 vs. uniprot
Match: A0A2T9Y524_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9Y524_9FUNG)

HSP 1 Score: 100 bits (248), Expect = 2.460e-22
Identity = 59/178 (33.15%), Postives = 86/178 (48.31%), Query Frame = 0
Query:    5 PICAMAAARRARALQKCRKLRTWVRHLVEEPFKHKCKTWITGTNTWMNTYEHRLAFLSIAESPEGIKEAGGWVNIPPKAFSRCLADYEKSRLTRTKTGGYPEFSIGIALIIKCRLGGFWGAKRMVFVGLIPGEWARKCPCCEGRHSETLQHALLECPRWADGRGALLAPLIEEAKTLI 182
            P+   A+A R RA  K   L TW+  L++ PFK++  TWITGT       E +L  + + E  +   +   W++     FSR L D E           YPE S GI  IIK R+G F  A ++     +  E+  KCP C     ET+ H L +C +WAD R ++L   I +   ++
Sbjct:   37 PVNTRASALRERAYYKWLTLNTWIADLIDNPFKNRLSTWITGTKNGTADLE-QLEVMGVLEKAKDKSKISEWISNNDIGFSRNLTDLELL---------YPEHSSGIQKIIKIRIGCFNTALKLAKSKTLAEEYLNKCPFCNKFEPETMGHYLFKCSKWADQRQSILGEYISQPNLIV 204          
BLAST of mRNA_H-elongata_contig96993.17072.1 vs. uniprot
Match: A0A2T9YW11_9FUNG (Uncharacterized protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YW11_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 1.060e-19
Identity = 56/167 (33.53%), Postives = 79/167 (47.31%), Query Frame = 0
Query:    5 PICAMAAARRARALQKCRKLRTWVRHLVEEPFKHKCKTWITGTNTWMN------TYEHRLAFLSIAESPEGIKEAGGWVNIPPKAFSRCLADYEKSRLTRTKTGGYPEFSIGIALIIKCRLGGFWGAKRMVFVGLIPGEWARKCPCCEGRHSETLQHALLECPRWAD 165
            P+   A+A R RA  K   L TW+  L++ PFK++  TWITGT  W++      +Y      L I    +   +   W++     FSR L D E           YPE S GI  IIK R+G F  A ++     +  E+  KCP C     ET++H L +C +W D
Sbjct:   40 PVNTRASALRERAYYKWPTLNTWIADLIDNPFKNRLSTWITGTKKWISRFGTAGSYGSARKVLEIRARAKDKSKISEWISNNDIGFSRNLTDLELL---------YPEHSSGIQKIIKIRIGCFNTALKLAKSKTLAEEYLNKCPFCNKFEPETVEHYLYKCSKWTD 197          
BLAST of mRNA_H-elongata_contig96993.17072.1 vs. uniprot
Match: A0A2T9YLY9_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YLY9_9FUNG)

HSP 1 Score: 86.3 bits (212), Expect = 3.910e-18
Identity = 48/148 (32.43%), Postives = 70/148 (47.30%), Query Frame = 0
Query:   24 LRTWVRHLVEEPFKHKCKTWITGTNTWMN------TYEHRLAFLSIAESPEGIKEAGGWVNIPPKAFSRCLADYEKSRLTRTKTGGYPEFSIGIALIIKCRLGGFWGAKRMVFVGLIPGEWARKCPCCEGRHSETLQHALLECPRWAD 165
            L TW+  L++ PFK++  TWITGT  W++      +Y      L I    +   +   W++     FSR L D E           YPE S GI  IIK R+G F  A ++     +  ++  KCP C     ET++H L +C +W D
Sbjct:   19 LNTWIADLIDNPFKNRLSTWITGTKKWISRFGTARSYGSARKVLEIRARAKDKSKISEWISNNDIGFSRNLTDLELL---------YPEHSSGIQKIIKIRIGCFNTALKLAKSKTLAEDYLNKCPFCNKFEPETVEHYLFKCSKWTD 157          
BLAST of mRNA_H-elongata_contig96993.17072.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 1.150e-13
Identity = 53/187 (28.34%), Postives = 84/187 (44.92%), Query Frame = 0
Query:    1 MGTPPICAMAAARRARALQKCRKLRTWVRHLVEEPFKHKCKTWITGTNTWMNTYEHRLAFLSIAESPEGIKEAGGWVNIPPKAFSRCL-----ADYEKSRLTRTKTGGY-----------PEFSIGIA--------LIIKCRLGGFWGAKRMVFVGLIPGEWARKCPCCEGRHSETLQHALLECPRW 163
            +G  PI AMAAA R RA  K   L T +  LV +P + +  TW +GT  W++ +    A L+     + ++    W ++ P+  S  +       +E S    T T              P++  GI         ++I+ R   F  A+R+  +  +P  +   CP C G   E+++H LLECPRW
Sbjct:  833 LGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASAELA-----QNVRVPPAWRSLQPRVASNLVKAAVWGRFETSSSACTNTWSIYSQASYVGNPLPQYGTGIPAGAVAGLHIMIQLRTRVFPTARRLARIHAMPERFLHHCPACGGDVIESIEHILLECPRW 1014          
BLAST of mRNA_H-elongata_contig96993.17072.1 vs. uniprot
Match: A0A2T9YWB9_9FUNG (Uncharacterized protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YWB9_9FUNG)

HSP 1 Score: 73.6 bits (179), Expect = 5.790e-12
Identity = 47/184 (25.54%), Postives = 75/184 (40.76%), Query Frame = 0
Query:    5 PICAMAAARRARALQKCRKLRTWVRHLVEEPFKHKCKTWITGTNTWMN------TYEHRLAFLSIAESPEGIKEAGGWVNIPPKAFSRCLADYEKSRLTRTKTGGYPEFSIGIALIIKCRLGGFWGAKRMVFVGLIPGEWARKCPCCEGRHSETLQHALLECPRWADGRGALLAPLIEEAKTLI 182
            P+   A+  R RA  +   L TW+  L++ PFK++  TWITGT  W++      +Y      L I    +   +   W++     FSR L D +           YPE S                            ++  KCP C     ET++H L++C +WAD R ++L   I +   ++
Sbjct:  355 PVNTRASVLRERAYYRWPTLNTWIADLIDNPFKNRISTWITGTKKWVSRFGTTGSYGSARKVLEIRARAKDKSKISEWISKNAIGFSRNLTDLKLL---------YPEHSTD--------------------------KYLNKCPFCNKFEPETVEHYLIKCSKWADQRQSILGEYISQPNLIV 503          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96993.17072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE4.600e-4741.79Reverse transcriptase domain-containing protein n=... [more]
A0A2T9Y524_9FUNG2.460e-2233.15Uncharacterized protein (Fragment) n=1 Tax=Smittiu... [more]
A0A2T9YW11_9FUNG1.060e-1933.53Uncharacterized protein n=1 Tax=Smittium simulii T... [more]
A0A2T9YLY9_9FUNG3.910e-1832.43Uncharacterized protein (Fragment) n=1 Tax=Smittiu... [more]
A0A7S1SJ55_9CHLO1.150e-1328.34Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A2T9YWB9_9FUNG5.790e-1225.54Uncharacterized protein n=1 Tax=Smittium simulii T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96993contigH-elongata_contig96993:1405..2016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96993.17072.1mRNA_H-elongata_contig96993.17072.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96993 1405..2016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96993.17072.1 ID=prot_H-elongata_contig96993.17072.1|Name=mRNA_H-elongata_contig96993.17072.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=182bp
MGTPPICAMAAARRARALQKCRKLRTWVRHLVEEPFKHKCKTWITGTNTW
MNTYEHRLAFLSIAESPEGIKEAGGWVNIPPKAFSRCLADYEKSRLTRTK
TGGYPEFSIGIALIIKCRLGGFWGAKRMVFVGLIPGEWARKCPCCEGRHS
ETLQHALLECPRWADGRGALLAPLIEEAKTLI
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