mRNA_H-elongata_contig122263.1702.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig122263.1702.1
Unique NamemRNA_H-elongata_contig122263.1702.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A6H5KTV8_9PHAE (ATPase ASNA1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV8_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 5.290e-139
Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 1 
Query:    1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
            + MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALS+LMDLKNKFSG+FSQFG+MFG GGA+EDD+FGKLLQLKE+INKVN QFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIG+LQKWY+ EE TL  EAKSIICKTLARKRMQ   DKYIGQI+DLYEDFHVVLMPLLDHE R
Sbjct:  112 KGMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSKLMDLKNKFSGLFSQFGNMFGAGGATEDDMFGKLLQLKEIINKVNDQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGDLQKWYSTEEGTLSTEAKSIICKTLARKRMQ---DKYIGQIYDLYEDFHVVLMPLLDHEVR 329
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A835ZI69_9STRA (ATPase ASNA1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI69_9STRA)

HSP 1 Score: 366 bits (940), Expect = 7.250e-125
Identity = 180/221 (81.45%), Postives = 199/221 (90.05%), Query Frame = 1 
Query:    1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
            ++MF+DMS SIPGVDEAMSFAELMKMVQ MNFSCI+FDTAPTGHTLRLLSFPTIMDKAL+++M LK+KF+G   QFG+MFG GGAS DDL GKL Q++++INKVN QFKDP++TTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFP KDIG+LQKWY  EE TL  EAKSIICKT++RKRMQ   DKYIGQI DLYEDFHVVLMPLLDHE R
Sbjct:  118 KNMFADMSTSIPGVDEAMSFAELMKMVQVMNFSCIIFDTAPTGHTLRLLSFPTIMDKALTKIMALKDKFAGALGQFGAMFGAGGASPDDLMGKLEQMRDIINKVNDQFKDPERTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPNKDIGDLQKWYESEEATLSGEAKSIICKTMSRKRMQ---DKYIGQILDLYEDFHVVLMPLLDHEVR 335
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S2SEK5_9STRA (ATPase ASNA1 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEK5_9STRA)

HSP 1 Score: 298 bits (763), Expect = 4.760e-98
Identity = 148/219 (67.58%), Postives = 174/219 (79.45%), Query Frame = 1 
Query:    7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
            +  D++ +IPG+DEAMSFAELMK VQ M++  IVFDTAPTGHTLRLLSFPT++ KA  ++M LKN F G+ SQF SM G+   SE+ L G+L Q +EVI +VN  FKDP KTTFVCVCIPEFLSLYETERLVQELTKF+IDTHN+VVNQVLFP KD  EL +WY  EE  L  EA+ ++ K LARKRMQ   DKY+ QI+DLYEDFHVVLMPLL+HE R
Sbjct:  122 LMQDLTQAIPGIDEAMSFAELMKQVQTMDYDVIVFDTAPTGHTLRLLSFPTMLGKAFDKIMALKNSFGGLLSQFSSMMGSQMPSEEMLLGRLEQTREVIERVNLTFKDPTKTTFVCVCIPEFLSLYETERLVQELTKFDIDTHNVVVNQVLFPDKDAQELSEWYTTEEPKLSPEARELLGKLLARKRMQ---DKYVNQIWDLYEDFHVVLMPLLNHEVR 337
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S2AZ07_9STRA (ATPase ASNA1 homolog n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZ07_9STRA)

HSP 1 Score: 291 bits (746), Expect = 1.630e-95
Identity = 145/221 (65.61%), Postives = 175/221 (79.19%), Query Frame = 1 
Query:    1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
            +S+  D++ +IPG+DEAMSFAELMK VQ M++  IVFDTAPTGHTLRLLSFP+++ KA  ++M LKN+FSG+F+Q   M G    SED L GKL Q +EVI +VN  FKDP KTTFVCVCIPEFLSLYETERLVQELTK + DTHNIVVNQVLFP KD  +L +WY +E+  L E ++ ++ K LARKRMQ   DKY+ QI+DLYEDFHVVLMPLL+HE R
Sbjct:  116 QSLMQDLTKAIPGIDEAMSFAELMKQVQAMDYDVIVFDTAPTGHTLRLLSFPSMLGKAFDKIMALKNRFSGLFTQMQGMMGPDMPSEDMLLGKLEQTREVIERVNLTFKDPTKTTFVCVCIPEFLSLYETERLVQELTKLDFDTHNIVVNQVLFPDKDATQLTEWYEEEKPKLSETSQDLLSKLLARKRMQ---DKYVNQIWDLYEDFHVVLMPLLNHEVR 333
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: W7U3J2_9STRA (ATPase ASNA1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3J2_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.780e-95
Identity = 146/221 (66.06%), Postives = 172/221 (77.83%), Query Frame = 1 
Query:    1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLYEDFHVVLMPLLDHEAR 663
            +SM  ++++SIPG+DE +SFAELMK V+ M++S +VFDTAPTGHTLRLLSFP+ ++ A  ++M  KNKFSG+ SQFG M G    +ED L GKL Q ++ I KVN QF+DP  TTFVCVCI EFLS+YETERLVQEL KFEIDTHNIVVNQVLFP KD  E+  W+ K + TL  EA  II K LARKRMQ   DKYI Q+FDLYEDFHVVLMPLLDHE R
Sbjct:  134 QSMLQELTSSIPGIDEIISFAELMKQVEQMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKIMAFKNKFSGLMSQFGGMMGQPPGAEDALLGKLDQTRDTIEKVNKQFRDPQATTFVCVCIAEFLSIYETERLVQELAKFEIDTHNIVVNQVLFPDKDATEMSAWHEKTKATLPGEANEIISKFLARKRMQ---DKYINQVFDLYEDFHVVLMPLLDHEVR 351
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S1DYB8_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DYB8_9STRA)

HSP 1 Score: 280 bits (717), Expect = 3.850e-92
Identity = 145/226 (64.16%), Postives = 180/226 (79.65%), Query Frame = 1 
Query:    1 RSMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGAS----EDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
            +S+ S++++SIPG+DEAMSF+ELMK VQN++F  +VFDTAPTGHTLRLLSFPTI++KAL ++MDLK++F G+  Q  +MFG GGA+    +D L G+L + + VINKVN  F+DP  TTFVCVCIPEFLS+YETERLVQEL+KF ID+HNIVVNQVLFP KD  EL  W+   +  L +EA+ I  K +ARKRMQ   DKYIGQ FDLY +DFHVVLMPLLD+E R
Sbjct:   42 QSLMSELTSSIPGIDEAMSFSELMKQVQNLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMDLKDRFGGLIGQASAMFG-GGANPTQVQDQLVGRLEETRAVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDSHNIVVNQVLFPEKDAEELGDWFEDNKDALPKEAQEICGKMMARKRMQ---DKYIGQCFDLYGDDFHVVLMPLLDYEVR 263
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A1E7FED7_9STRA (ATPase ASNA1 homolog n=5 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FED7_9STRA)

HSP 1 Score: 283 bits (724), Expect = 4.220e-92
Identity = 146/224 (65.18%), Postives = 178/224 (79.46%), Query Frame = 1 
Query:    4 SMFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTG---GASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
            SM S+++NSIPG+DEAMSF+ELMK VQ+++F  +VFDTAPTGHTLRLLSFPTI++KAL ++M+LK++F G+  Q  +M G G   GA++D + G+L + + VINKVN  F+DP  TTFVCVCIPEFLS+YETERLVQEL+KF IDTHNIVVNQVLFP KD  EL +WY   + TL  EA+ I  K L+RKRMQ   DKYIGQ FDLY EDFHV LMPLLD+E R
Sbjct:  122 SMMSELTNSIPGIDEAMSFSELMKQVQSLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQATAMMGGGNNPGATQDAIVGRLEETRVVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDTHNIVVNQVLFPEKDAEELSEWYEGNKDTLPTEAREICGKMLSRKRMQ---DKYIGQCFDLYGEDFHVSLMPLLDYEVR 342
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7S0CCI9_9STRA (ATPase ASNA1 homolog n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCI9_9STRA)

HSP 1 Score: 283 bits (724), Expect = 7.830e-92
Identity = 143/221 (64.71%), Postives = 177/221 (80.09%), Query Frame = 1 
Query:    7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGAS-EDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
            + +++++SIPG+DEAMSF+ELMK VQ++++  +VFDTAPTGHTLRLLSFPTIM+KAL ++M+LK+KF G+  Q  SMFG  GA  +D L GKL + + +INKVN  F+DPD TTFVCVCIPEFLS+YETERLVQEL+KF ID+HNIVVNQVLFP KD  E+ +W  +    L +EA+ I  K +ARKRMQ   DKYIGQ FDLY +DFHVVLMPLLDHE R
Sbjct:  145 LMAELTSSIPGIDEAMSFSELMKQVQSLDYDIVVFDTAPTGHTLRLLSFPTIMEKALGKVMELKDKFGGILGQAASMFGGNGAQMQDMLTGKLEETRAIINKVNDAFQDPDTTTFVCVCIPEFLSIYETERLVQELSKFGIDSHNIVVNQVLFPEKDAEEMGEWLKENNDKLPKEAQDICGKMMARKRMQ---DKYIGQCFDLYGDDFHVVLMPLLDHEVR 362
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BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: B7G933_PHATC (ATPase ASNA1 homolog n=5 Tax=Naviculales TaxID=38748 RepID=B7G933_PHATC)

HSP 1 Score: 279 bits (714), Expect = 9.170e-91
Identity = 142/223 (63.68%), Postives = 174/223 (78.03%), Query Frame = 1 
Query:    7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGG---ASEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
            MF+D+ NSIPG+DEAMSF+ELMK VQ ++F  +VFDTAPTGHTLRLLSFPTI++KA +++ +LK++F G+  Q  ++   G    A+++ L GKL + + VINKVN  F+DP KTTFVCVCIPEFLS+YETERLVQEL+K+ ID+HNIVVNQVLFP KD  EL  WY     TL +EA+ I  K LARKRMQ   DKYIGQ FDLY +DFHVVLMPLLD+E R
Sbjct:  110 MFNDLQNSIPGIDEAMSFSELMKQVQQLDFDVVVFDTAPTGHTLRLLSFPTILEKAFAKVWELKDRFGGLIGQATALMSGGNNPAAAQEQLLGKLEETRAVINKVNQAFQDPTKTTFVCVCIPEFLSIYETERLVQELSKYGIDSHNIVVNQVLFPEKDAEELSAWYEANGATLPKEAREICSKLLARKRMQ---DKYIGQCFDLYGDDFHVVLMPLLDYEVR 329
[Close]
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Match: A0A7R9ZQE1_9STRA (ATPase ASNA1 homolog n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQE1_9STRA)

HSP 1 Score: 275 bits (704), Expect = 4.080e-89
Identity = 140/223 (62.78%), Postives = 174/223 (78.03%), Query Frame = 1 
Query:    7 MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFPTIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGA---SEDDLFGKLLQLKEVINKVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQVLFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIFDLY-EDFHVVLMPLLDHEAR 663
            M S++++SIPG+DEAMSF+ELMK VQ ++F  +VFDTAPTGHTLRLLSFPTI++KAL ++M+LK++F G+  Q  +M G+G     ++D + G+L   + VINKVN  F+DP  TTFVCVCIPEFLS+YETERLVQEL+KF ID HNIVVNQV+FP KD  EL +WY K + +L  EA+ I  K +ARKRMQ   DKYIGQ FDLY EDFHV LMPLLD+E R
Sbjct:  120 MMSELTSSIPGIDEAMSFSELMKQVQGLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQATAMLGSGSNPANAQDAILGRLEDTRAVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDAHNIVVNQVIFPEKDAEELAEWYDKTKASLPSEAQEICSKMMARKRMQ---DKYIGQCFDLYGEDFHVTLMPLLDYEVR 339
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122263.1702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTV8_9PHAE5.290e-13990.50ATPase ASNA1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A835ZI69_9STRA7.250e-12581.45ATPase ASNA1 homolog n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2SEK5_9STRA4.760e-9867.58ATPase ASNA1 homolog n=1 Tax=Rhizochromulina marin... [more]
A0A7S2AZ07_9STRA1.630e-9565.61ATPase ASNA1 homolog n=1 Tax=Florenciella parvula ... [more]
W7U3J2_9STRA1.780e-9566.06ATPase ASNA1 homolog n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S1DYB8_9STRA3.850e-9264.16Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A1E7FED7_9STRA4.220e-9265.18ATPase ASNA1 homolog n=5 Tax=Bacillariaceae TaxID=... [more]
A0A7S0CCI9_9STRA7.830e-9264.71ATPase ASNA1 homolog n=1 Tax=Proboscia inermis Tax... [more]
B7G933_PHATC9.170e-9163.68ATPase ASNA1 homolog n=5 Tax=Naviculales TaxID=387... [more]
A0A7R9ZQE1_9STRA4.080e-8962.78ATPase ASNA1 homolog n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122263contigH-elongata_contig122263:495..1857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.4
Seed ortholog evalue7.1e-73
Seed eggNOG ortholog2850.Phatr22896
Preferred nameGET3
KEGG koko:K01551
KEGG TC3.A.19.1,3.A.21.1,3.A.4.1
GOsGO:0000166,GO:0000749,GO:0000750,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0005085,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006457,GO:0006605,GO:0006612,GO:0006620,GO:0006810,GO:0006811,GO:0006820,GO:0006886,GO:0006890,GO:0006950,GO:0006986,GO:0006996,GO:0007029,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0007399,GO:0007416,GO:0008104,GO:0008144,GO:0008150,GO:0008509,GO:0009266,GO:0009408,GO:0009628,GO:0009636,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010256,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0015031,GO:0015075,GO:0015103,GO:0015105,GO:0015318,GO:0015698,GO:0015700,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019236,GO:0019898,GO:0019899,GO:0022607,GO:0022857,GO:0023051,GO:0023052,GO:0023056,GO:0030424,GO:0030554,GO:0030968,GO:0031136,GO:0031137,GO:0031139,GO:0031974,GO:0031981,GO:0031984,GO:0032005,GO:0032024,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034220,GO:0034613,GO:0034620,GO:0034976,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0036477,GO:0036498,GO:0042175,GO:0042221,GO:0042802,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043529,GO:0043900,GO:0043902,GO:0044085,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045048,GO:0045184,GO:0046685,GO:0046883,GO:0046887,GO:0046907,GO:0046999,GO:0048193,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0050796,GO:0050808,GO:0050896,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051082,GO:0051179,GO:0051205,GO:0051222,GO:0051223,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070727,GO:0070887,GO:0070972,GO:0071310,GO:0071444,GO:0071702,GO:0071705,GO:0071722,GO:0071816,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090087,GO:0090150,GO:0090276,GO:0090277,GO:0097159,GO:0097367,GO:0097458,GO:0098656,GO:0098754,GO:0098772,GO:0098827,GO:0120025,GO:1901265,GO:1901363,GO:1903530,GO:1903532,GO:1904951,GO:1990507,GO:2000241,GO:2000243
EggNOG free text desc.ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting
EggNOG OGs2XE47@2836,COG0003@1,KOG2825@2759
EC3.6.3.16
COG Functional cat.P
BiGG ReactioniMM904.YDL100C,iND750.YDL100C
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons4
Model size663
Cds size657
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122263.1702.1prot_H-elongata_contig122263.1702.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig122263 495..1851 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929719.6421227-CDS-H-elongata_contig122263:494..5751622929719.6421227-CDS-H-elongata_contig122263:494..575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 495..575 -
1691679131.623472-CDS-H-elongata_contig122263:494..5751691679131.623472-CDS-H-elongata_contig122263:494..575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 495..575 -
1622929719.659625-CDS-H-elongata_contig122263:771..9001622929719.659625-CDS-H-elongata_contig122263:771..900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 772..900 -
1691679131.6368508-CDS-H-elongata_contig122263:771..9001691679131.6368508-CDS-H-elongata_contig122263:771..900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 772..900 -
1622929719.677525-CDS-H-elongata_contig122263:1201..14021622929719.677525-CDS-H-elongata_contig122263:1201..1402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 1202..1402 -
1691679131.6452382-CDS-H-elongata_contig122263:1201..14021691679131.6452382-CDS-H-elongata_contig122263:1201..1402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 1202..1402 -
1622929719.6885512-CDS-H-elongata_contig122263:1605..18511622929719.6885512-CDS-H-elongata_contig122263:1605..1851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 1606..1851 -
1691679131.6532025-CDS-H-elongata_contig122263:1605..18511691679131.6532025-CDS-H-elongata_contig122263:1605..1851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122263 1606..1851 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929719.7084005-UTR-H-elongata_contig122263:1851..18571622929719.7084005-UTR-H-elongata_contig122263:1851..1857Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig122263 1852..1857 -
1691679131.661838-UTR-H-elongata_contig122263:1851..18571691679131.661838-UTR-H-elongata_contig122263:1851..1857Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig122263 1852..1857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig122263.1702.1

>prot_H-elongata_contig122263.1702.1 ID=prot_H-elongata_contig122263.1702.1|Name=mRNA_H-elongata_contig122263.1702.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
MFSDMSNSIPGVDEAMSFAELMKMVQNMNFSCIVFDTAPTGHTLRLLSFP
TIMDKALSRLMDLKNKFSGVFSQFGSMFGTGGASEDDLFGKLLQLKEVIN
KVNTQFKDPDKTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIVVNQV
LFPTKDIGELQKWYAKEEKTLGEEAKSIICKTLARKRMQARRDKYIGQIF
DLYEDFHVVLMPLLDHEAR
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mRNA from alignment at H-elongata_contig122263:495..1857-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig122263.1702.1 ID=mRNA_H-elongata_contig122263.1702.1|Name=mRNA_H-elongata_contig122263.1702.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1363bp|location=Sequence derived from alignment at H-elongata_contig122263:495..1857- (Himanthalia elongata Himel1 dioecious)
CGCAGCATGTTTTCGGACATGTCGAACTCCATTCCCGGGGTGGACGAAGC
GATGTCATTCGCGGAGCTCATGAAGATGGTGCAGAACATGAACTTCAGCT
GCATTGTGTTCGACACGGCCCCGACCGGGCACACCCTGCGCCTCCTGTCT
TTCCCCACCATCATGGACAAGGCACTGTCGAGGCTCATGGACTTGAAGAA
CAAGTTTTCCGGCGTGTTCTCGCAGTTCGGCAGCATGTTCGGGACGGGAG
GGGTGAGAGAACGTAAAGTCGTCGGTTGTCGGGTGTCTCAAAAGACTGAC
AACTTTTGTTGCGATCGGTCCTATTTATCTCCGCCTAGGTTTGATTTGAA
ACTGTATCTTTGCTCTGTTGGCGACACAACCTCAAATAGCCGGTAATTGC
CCTGTCTGGTTCTATCGGTCAAAGCGATTTGCGATATCCCTCGTGCCTGG
TGCAGGCCAGCGAGGATGACTTGTTCGGCAAGCTGCTCCAGCTGAAGGAG
GTCATCAACAAGGTTAACACTCAGTTTAAAGACCCGGACAAGACCACGTT
TGTGTGTGTCTGCATTCCGGAGTTTCTGTCCCTGTACGAGACGGAGAGGT
TGGTGCAGGAGCTCACCAAGTTCGAGATCGATACGCACAACATCGTCGTC
AATCAGGTGGGCGCCATCCGGGAGGATGTCGAGATGCATCGTGTTAGCGG
ACGAGGTAGGGATCGGGTGCTTCGGCTGGTTTGGTCGCAGTTCCACGCAC
CGGGAGGGACCCAGAGAGCAGCAAGGCGTTGGCTACTAAATGGGAACAAC
TTTTTGACCCAAGTATTTCGAGGACTATCTTGATGGTCCCTGGAGCTGCC
TCGCAACATGCACGATGCACGTGTTCTAGGTCGCTCTTCCGGCACCATAT
TCATGACCTTGCGGAGTCGCTTTTGCGGTATCGCTTTCCCCTGCCCCACG
GTCGCAGGTCCTCTTCCCCACCAAAGACATCGGGGAGCTGCAGAAGTGGT
ACGCAAAGGAGGAGAAAACCCTGGGCGAAGAAGCTAAGAGCATTATCTGC
AAGACTTTGGCGCGCAAACGCATGCAGGCGAGACGCGTCTTCCACTCCGC
CCCCCCCCCCAACTTTCGTATGGATCCTTGTGAAACTAACTGTCTAGCAC
GGAAGTTCTCACGCGGAAAACGAAAATGTTTAGATTTTGATCGGTCCGCG
ATGAAAGCCCGCCCGCCTGCCGTCATCGCTCTCGTTGCTTCGCTTCGCTT
TCCCGACCGATTGATTGCGTGGCGCTTCACAGGACAAGTACATTGGGCAG
ATCTTCGACTTGTACGAGGACTTCCACGTCGTTCTCATGCCGCTATTGGA
CCATGAGGCGAGA
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Coding sequence (CDS) from alignment at H-elongata_contig122263:495..1857-

>mRNA_H-elongata_contig122263.1702.1 ID=mRNA_H-elongata_contig122263.1702.1|Name=mRNA_H-elongata_contig122263.1702.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at H-elongata_contig122263:495..1857- (Himanthalia elongata Himel1 dioecious)
ATGTTTTCGGACATGTCGAACTCCATTCCCGGGGTGGACGAAGCGATGTC
ATTCGCGGAGCTCATGAAGATGGTGCAGAACATGAACTTCAGCTGCATTG
TGTTCGACACGGCCCCGACCGGGCACACCCTGCGCCTCCTGTCTTTCCCC
ACCATCATGGACAAGGCACTGTCGAGGCTCATGGACTTGAAGAACAAGTT
TTCCGGCGTGTTCTCGCAGTTCGGCAGCATGTTCGGGACGGGAGGGATGT
TTTCGGACATGTCGAACTCCATTCCCGGGGTGGACGAAGCGATGTCATTC
GCGGAGCTCATGAAGATGGTGCAGAACATGAACTTCAGCTGCATTGTGTT
CGACACGGCCCCGACCGGGCACACCCTGCGCCTCCTGTCTTTCCCCACCA
TCATGGACAAGGCACTGTCGAGGCTCATGGACTTGAAGAACAAGTTTTCC
GGCGTGTTCTCGCAGTTCGGCAGCATGTTCGGGACGGGAGGGGCCAGCGA
GGATGACTTGTTCGGCAAGCTGCTCCAGCTGAAGGAGGTCATCAACAAGG
TTAACACTCAGTTTAAAGACCCGGACAAGACCACGTTTGTGTGTGTCTGC
ATTCCGGAGTTTCTGTCCCTGTACGAGACGGAGAGGTTGGTGCAGGAGCT
CACCAAGTTCGAGATCGATACGCACAACATCGTCGTCAATCAGGCCAGCG
AGGATGACTTGTTCGGCAAGCTGCTCCAGCTGAAGGAGGTCATCAACAAG
GTTAACACTCAGTTTAAAGACCCGGACAAGACCACGTTTGTGTGTGTCTG
CATTCCGGAGTTTCTGTCCCTGTACGAGACGGAGAGGTTGGTGCAGGAGC
TCACCAAGTTCGAGATCGATACGCACAACATCGTCGTCAATCAGGTCCTC
TTCCCCACCAAAGACATCGGGGAGCTGCAGAAGTGGTACGCAAAGGAGGA
GAAAACCCTGGGCGAAGAAGCTAAGAGCATTATCTGCAAGACTTTGGCGC
GCAAACGCATGCAGGCGAGACGCGTCCTCTTCCCCACCAAAGACATCGGG
GAGCTGCAGAAGTGGTACGCAAAGGAGGAGAAAACCCTGGGCGAAGAAGC
TAAGAGCATTATCTGCAAGACTTTGGCGCGCAAACGCATGCAGGCGAGAC
GCGACAAGTACATTGGGCAGATCTTCGACTTGTACGAGGACTTCCACGTC
GTTCTCATGCCGCTATTGGACCATGAGGCGAGAGACAAGTACATTGGGCA
GATCTTCGACTTGTACGAGGACTTCCACGTCGTTCTCATGCCGCTATTGG
ACCATGAGGCGAGA
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