prot_H-elongata_contig95961.16992.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95961.16992.1
Unique Nameprot_H-elongata_contig95961.16992.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length212
Homology
BLAST of mRNA_H-elongata_contig95961.16992.1 vs. uniprot
Match: A0A4Q3DGA8_9RICK (DUF4371 domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DGA8_9RICK)

HSP 1 Score: 72.0 bits (175), Expect = 4.290e-11
Identity = 55/206 (26.70%), Postives = 91/206 (44.17%), Query Frame = 0
Query:    1 VDESTDVSDSNNCMIFLHYDDNFKPNVVIFALASMHEVNKDTQ-----KVESATGRRISDVISAKIQARKGVTAKKILGFSSDGDAAMVGVRRRAATLLMEDQPYRINTHCIAHRQSLGASAVCLEVPLSKEVDAVVMDMNGYLSHSSTRKGNLKIMQLADTMGGSKLPALEGIFKVRFLCRGTAVSVATKNFHVILSFLAEEAGQ 201
            +D STD S   +C+I++ Y D             M+ +   T+     K+ S TG  +   I    +    +   K+ G  +DGD+AM+G R     LL +  PY ++ HC AH+ +L  S V    PL ++VD+V+ D + + S S  +    K    A  +   K P        R+  R   +    KN   ++ FL++ + Q
Sbjct:  151 LDNSTDKSTEEHCLIYIRYLD-------------MNSLQAKTEYLCTVKLFSKTGLSMFKTIQLVFKVLD-IPLSKLAGLCTDGDSAMIGNRNGVRGLLRQVCPYLLSAHCAAHKSALVMSDVEKNHPLVQQVDSVLKDTHNFFSRSPKKAAAWKRYAKAHGITAFKFPMFN---TTRWFSRMVCIKTLLKNLPQLIVFLSKPSIQ 339          
BLAST of mRNA_H-elongata_contig95961.16992.1 vs. uniprot
Match: UPI001939B116 (E3 SUMO-protein ligase KIAA1586-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939B116)

HSP 1 Score: 67.8 bits (164), Expect = 1.180e-9
Identity = 48/199 (24.12%), Postives = 95/199 (47.74%), Query Frame = 0
Query:    1 VDESTDVSDSNNCMIFLHYDDNFKPNVVIFALASMHEVNKDTQKVESATGRRISDVISA--KIQARKGVTAKKILGFSSDGDAAMVGVRRRAATLLMEDQPYRINTHCIAHRQSLGASAVCLEVPLSKEVDAVVMDMNGYLSHSSTRKGNLKIMQLADTMGGSKLPALEGIFKVRFLCRGTAVSVATKNFHVILSFLAE 197
            VDESTD+S+S   ++++ Y  +F+       +  +   +              S +++A  +   +  +   K++ F+SDG A M+G R   A  L E  P+ +  HC+AHR+ LG +    EV L ++++ ++  +    S S+  +   K   +A       + A + + +VR+L R  A+    KN+  ++++  E
Sbjct:  202 VDESTDISESECLILYVKYRVSFEYKTRFGGIIQLKSCDA-------------SSIVTAIEEFYKKYRLELDKMVMFTSDGAAVMLGRRNGVAAKLKERIPHLVQQHCVAHREDLGIADTWKEVKLLQDIETLMRTIYSMFSRSTINR--CKFQDIAAACENEAI-AFKPLNEVRWLSRHFALQAIIKNYDSLIAYFEE 384          
BLAST of mRNA_H-elongata_contig95961.16992.1 vs. uniprot
Match: UPI001AE456DC (protein FAM200A-like n=4 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE456DC)

HSP 1 Score: 60.5 bits (145), Expect = 3.700e-7
Identity = 52/201 (25.87%), Postives = 94/201 (46.77%), Query Frame = 0
Query:    1 VDESTDVSDSNNCMIFLHYDDNFKPNVVIFALASMHEVNKDTQKVESATGRRISDVISAKIQARKGVTAKKILGFSSDGDAAMVGVRRRAATLLMEDQPYRINTHCIAHRQSLGASAVCLEVPLSKEVDAVVMDMNGYLSHSSTRKGNLKIMQLADTMGGSKLPALEGIFKVRFLCRGTAVSVATKNFHVILSFLAEEAGQ 201
            +DESTD+S+S   ++F+ Y  + K N  +   + +           + TG  I + + +K++  +G+  +  +   +DG  AM+G ++     +++  P+   THC+ HR+SL +    LE  L   +D  V  +N    +  TR  N+++        GS+   L    +VR+L RG  +S   K    +  FL E   Q
Sbjct:  266 LDESTDISNSAQLLVFVRYSFDGKLNEDMLFCSPLEG---------TCTGEDIFEKLDSKLK-EEGLFWENCISVCTDGAGAMLGKKKGLKARVLQVAPHINFTHCMIHRESLASKT--LEPDLKHVLDTAVKMVN----YIKTRPLNVRLFASLCNELGSEHEGLLFHTEVRWLSRGNVLSRLYKLRDEVRLFLMEHGSQ 450          
BLAST of mRNA_H-elongata_contig95961.16992.1 vs. uniprot
Match: UPI001AE79588 (SCAN domain-containing protein 3-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE79588)

HSP 1 Score: 60.1 bits (144), Expect = 4.670e-7
Identity = 51/201 (25.37%), Postives = 92/201 (45.77%), Query Frame = 0
Query:    1 VDESTDVSDSNNCMIFLHYDDNFKPNVVIFALASMHEVNKDTQKVESATGRRISDVISAKIQARKGVTAKKILGFSSDGDAAMVGVRRRAATLLMEDQPYRINTHCIAHRQSLGASAVCLEVPLSKEVDAVVMDMNGYLSHSSTRKGNLKIMQLADTMGGSKLPALEGIFKVRFLCRGTAVSVATKNFHVILSFLAEEAGQ 201
            +DESTD+S+S   ++F+ Y  + K             +N+D        G    + + +K++  +G+  +  +G  +DG   M+G ++     +++  P+   THC+ HR+SL +    LE  L   ++  V  +N    +  TR  N+++        GS+   L+   KVR+L RG  +S   K    +  FL E   Q
Sbjct:  127 LDESTDISNSAQLLVFVRYSFDGK-------------LNEDMLFCSPLEGMCTGEKLDSKLK-EEGLFWENCIGVCADGAGTMLGKKKGLKARVLQVAPHINFTHCMIHRESLASKM--LEPDLKHVLETAVKMVN----YIKTRPLNVRLFASLCNELGSEHEGLQFHTKVRWLSRGNVLSRLYKLRDEVRLFLMEHGSQ 307          
BLAST of mRNA_H-elongata_contig95961.16992.1 vs. uniprot
Match: A0A2I4D8T9_9TELE (SCAN domain-containing protein 3-like n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4D8T9_9TELE)

HSP 1 Score: 55.1 bits (131), Expect = 1.910e-5
Identity = 37/116 (31.90%), Postives = 57/116 (49.14%), Query Frame = 0
Query:    1 VDESTDVSDSNNCMIFLHYDDNFKPNVVIFALASMHEVNKDTQKVESATGRRISDVISAKIQARKGVTAKKILGFSSDGDAAMVGVRRRAATLLMEDQPYRINTHCIAHRQSLGAS 116
            VDESTDV DS   +I++ +   +  +   F      ++   T    S TG  I   I   +  ++G+  KK++  ++DG  AM+G  + A T L  D P  +  HCI H+  L AS
Sbjct:  189 VDESTDVCDSAQLLIYVRF---YNADQKSFC----EDLLGITPLQTSTTGEYIYLAIKGMLD-KRGIEPKKVIXITTDGAPAMIGKEKGAVTRLQNDNPDLLTYHCIVHQSVLCAS 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95961.16992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4Q3DGA8_9RICK4.290e-1126.70DUF4371 domain-containing protein n=1 Tax=Ricketts... [more]
UPI001939B1161.180e-924.12E3 SUMO-protein ligase KIAA1586-like n=1 Tax=Styel... [more]
UPI001AE456DC3.700e-725.87protein FAM200A-like n=4 Tax=Lepeophtheirus salmon... [more]
UPI001AE795884.670e-725.37SCAN domain-containing protein 3-like n=1 Tax=Lepe... [more]
A0A2I4D8T9_9TELE1.910e-531.90SCAN domain-containing protein 3-like n=1 Tax=Aust... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46880FAMILY NOT NAMEDcoord: 1..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95961contigH-elongata_contig95961:1608..2243 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95961.16992.1mRNA_H-elongata_contig95961.16992.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95961 1608..2243 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95961.16992.1 ID=prot_H-elongata_contig95961.16992.1|Name=mRNA_H-elongata_contig95961.16992.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
VDESTDVSDSNNCMIFLHYDDNFKPNVVIFALASMHEVNKDTQKVESATG
RRISDVISAKIQARKGVTAKKILGFSSDGDAAMVGVRRRAATLLMEDQPY
RINTHCIAHRQSLGASAVCLEVPLSKEVDAVVMDMNGYLSHSSTRKGNLK
IMQLADTMGGSKLPALEGIFKVRFLCRGTAVSVATKNFHVILSFLAEEAG
QFLVRVQAWWG*
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