mRNA_H-elongata_contig1222.1699.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A6H5JI21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI21_9PHAE) HSP 1 Score: 254 bits (649), Expect = 3.100e-82 Identity = 118/150 (78.67%), Postives = 134/150 (89.33%), Query Frame = 1
Query: 4 QEIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPGEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFIYKV 453
+EIAKKESTL EKR MQGWLKK+FVGQA+ITTILGGLMA D VPFFP VDISI+VLGFWFVWLFTVPSLRARKPG +EKVAL+IAFLATPVVSFAMPF+TK+PVPIYWAN+ L ACYGYGFT+G+PD+G+ + +QP WLKFI+KV
Sbjct: 165 EEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKV 314
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: D8LL49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL49_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.600e-81 Identity = 118/149 (79.19%), Postives = 133/149 (89.26%), Query Frame = 1
Query: 4 QEIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPGEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFIYK 450
+EIAKKESTL EKR MQGWLKK+FVGQA+ITTILGGLMA D VPFFP VDISI+VLGFWFVWLFTVPSLRARKPG +EKVAL+IAFLATPVVSFAMPFITK+PVPIYWAN+ L ACYGYGFT+G+PD+G+ + +QP WLKFI+K
Sbjct: 161 EEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFITKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFK 309
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A835YV04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV04_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.510e-54 Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 1
Query: 1 RQEIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKP-GEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFIYKV 453
R+ I KE+ LA EKR+VMQ WLK+IFVGQA ++ I+ G M YD VP F VD+SIRVLGFW +WLF +PSLRARKP AEK ALNIAF+A+P+VS A+P ITKDPV IYWANL + +A Y YGF G E A QP W++FI+K
Sbjct: 120 RKTIDGKEAKLATEKRAVMQDWLKQIFVGQAALSVIIAGAMVYDRVPGFEHVDLSIRVLGFWVIWLFAIPSLRARKPTNPAEKTALNIAFVASPLVSLALPAITKDPVSIYWANLAVCAASYVYGFASGGQSEEDE---AKQPQWVRFIFKA 268
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A6S9FX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FX91_HETAK) HSP 1 Score: 176 bits (447), Expect = 2.130e-52 Identity = 80/150 (53.33%), Postives = 105/150 (70.00%), Query Frame = 1
Query: 4 QEIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPGEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFIYKV 453
+EIA K++ EKR +QGWLK +FVGQ++++ ++ G ++Y VPF DVDIS+RVLGFWF+WLFT+PSLRARKP EK ALN AF TP+ + PF+TKDPV IYWANLV+ +ACYGYG + +P + PGW+K K
Sbjct: 123 EEIATKQTKANGEKRMYVQGWLKTLFVGQSVLSVVVAGFLSYGIVPFVEDVDISVRVLGFWFIWLFTIPSLRARKPAAGEKEALNWAFGLTPLTNLLAPFVTKDPVLIYWANLVVTAACYGYGLLLWKPSDAP-AEADTTPGWVKDALKA 271
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A7S2UZ01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ01_9STRA) HSP 1 Score: 175 bits (444), Expect = 8.620e-52 Identity = 84/153 (54.90%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 7 EIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPGEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSG----ANQPGWLKFIYKV 453
E+ +K L +EKR V+QGWLK +FVGQA+I+T GLM YDAVPF +D+S+RVLGFW +WLFTVPSLRARKP EK ALNIAF ATP+ + A+PF TKDPV IYWAN+ +L Y YGFT+G +N P +LK +
Sbjct: 132 EMEQKTKKLNVEKRMVVQGWLKNLFVGQAVISTFAAGLMVYDAVPFVDHLDLSVRVLGFWVIWLFTVPSLRARKPAADEKTALNIAFGATPLTNLALPFFTKDPVTIYWANMAVLGLSYAYGFTLGSXXXXXXXXXXXXXSNLPDFLKAAIRA 284
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A7S2FLN3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLN3_9STRA) HSP 1 Score: 163 bits (413), Expect = 7.740e-47 Identity = 75/152 (49.34%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 7 EIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPG------EAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFI 444
+IAKKE + E R VM+ WLK +FVGQ++++ + GL++YDA+PF P++D+++RVLGFW +WLFT+PSLR+RKPG AEK AL+IAFL TP+ + PF TK+P I+W N+V+LSACY Y FT+ + + A+ P +KF+
Sbjct: 128 QIAKKEFKKSNEMRGVMRDWLKAVFVGQSVLSVAICGLVSYDALPFLPNLDLAVRVLGFWGIWLFTIPSLRSRKPGGVWGMSNAEKNALDIAFLVTPLANLLAPFATKNPPDIFWLNMVVLSACYAYSFTVSPQESSGASADASLPKPIKFV 279
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: W7TZ94_9STRA (Resistance to phytophthora 1 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ94_9STRA) HSP 1 Score: 157 bits (397), Expect = 9.790e-45 Identity = 75/155 (48.39%), Postives = 102/155 (65.81%), Query Frame = 1
Query: 7 EIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPGEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTI-GRPDEGQNVSGANQ-----PGWLKFIYKV 453
+I KKE+ LA EKR VM+GWLK +F+GQ+++ +L G++AYDA+P F + + IR FW W+FT+PSLRAR+PG EK AL++AFL TPVVS MPF+T+D I+WAN V YGY F G+ + G+ G ++ PG LK K
Sbjct: 129 QIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKA 283
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A7S1GGE3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGE3_CYCTE) HSP 1 Score: 150 bits (379), Expect = 1.510e-42 Identity = 76/158 (48.10%), Postives = 108/158 (68.35%), Query Frame = 1
Query: 1 RQEIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFP--------DVDISIRVLGFWFVWLFTVPSLRARKPGEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFIYK 450
RQ+IAKKE +A+E+RSV +GWLK +F+ QA+++ +L +MA + F ++D+SI+VLGFW LF VPSLR+R+P AEK AL+IAFL TP++S P +TKD I+ ANL++++A Y + F D+ + SG+NQP WLKFIYK
Sbjct: 81 RQKIAKKEKDVALERRSVFRGWLKNVFLAQAVLSFVLSWIMASNPAQLFGGFDWFYSYNMDVSIKVLGFWXXXLFVVPSLRSRRPKGAEKKALDIAFLGTPLISIVAPALTKDTELIWGANLLVVAASYAFAFLTDGEDDDDD-SGSNQPEWLKFIYK 237
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A448Z3P0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3P0_9STRA) HSP 1 Score: 148 bits (374), Expect = 7.940e-41 Identity = 77/155 (49.68%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 10 IAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFP--------DVDISIRVLGFWFVWLFTVPSLRARKPGEAEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFIYK 450
I KKE LAIE+RSV +GWLK IFVGQA+I+ + +MA + F +DISI+VLG+WF WLF VPSLR+R+P EK AL+IAFL TP+VS A P +TKD I++AN V+++ YG+ + D+ + S +N+P WLKF+YK
Sbjct: 174 IEKKEGKLAIERRSVFRGWLKNIFVGQAVISFGISYVMATNPSSLFGGFDWYYYNSMDISIQVLGYWFWWLFIVPSLRSRRPRGFEKEALDIAFLGTPLVSLAAPVLTKDTGLIWFANFVIVAGAYGFAYLTDGDDDSDD-SDSNKPAWLKFVYK 327
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Match: A0A7S2FEW9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEW9_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.540e-40 Identity = 68/128 (53.12%), Postives = 90/128 (70.31%), Query Frame = 1
Query: 88 QAIITTILGGLMAYDAVPFFPDVDISIRVLGFWFVWLFTVPSLRARKPGE------AEKVALNIAFLATPVVSFAMPFITKDPVPIYWANLVMLSACYGYGFTIGRPDEGQNVSGANQPGWLKFIYKV 453
Q++++ ++ G +AYDA+PFFP +D+S+RVLGFW +WLFT+PSLR+RKPG AEK AL+I+FL TPVV+ AMP +TK+P I+WANLV L ACYGYGF D + S P +KF K
Sbjct: 1 QSVLSVVVCGAVAYDAMPFFPHLDLSVRVLGFWGIWLFTIPSLRSRKPGGVWGMNGAEKKALDISFLLTPVVNLAMPIVTKNPPDIFWANLVALGACYGYGFLAPDSDGDDDAS---LPAPIKFALKA 125 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1222.1699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1222.1699.1 >prot_H-elongata_contig1222.1699.1 ID=prot_H-elongata_contig1222.1699.1|Name=mRNA_H-elongata_contig1222.1699.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp RQEIAKKESTLAIEKRSVMQGWLKKIFVGQAIITTILGGLMAYDAVPFFPback to top mRNA from alignment at H-elongata_contig1222:7902..9885- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1222.1699.1 ID=mRNA_H-elongata_contig1222.1699.1|Name=mRNA_H-elongata_contig1222.1699.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1984bp|location=Sequence derived from alignment at H-elongata_contig1222:7902..9885- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1222:7902..9885- >mRNA_H-elongata_contig1222.1699.1 ID=mRNA_H-elongata_contig1222.1699.1|Name=mRNA_H-elongata_contig1222.1699.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig1222:7902..9885- (Himanthalia elongata Himel1 dioecious)back to top |