prot_H-elongata_contig9590.16988.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9590.16988.1
Unique Nameprot_H-elongata_contig9590.16988.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: D7G1I1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G1I1_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 2.380e-65
Identity = 119/220 (54.09%), Postives = 141/220 (64.09%), Query Frame = 0
Query:   22 MMSVLTPDLSYLLTFNDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKIDHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLY--VSDKLEPDLS--GEAHTNAARSTERLGSHGTFAPGVKTFFGG 237
            M SV   DLS L TFN  GGR  ER GTRG+FT GVR MSGG  RDV  E ++DHG+VLF S   KPDLS EA TNA+R TERLG+ G F PG + ++GG PRDVPLE + DHGKVL+VS   +PDLS EA TN +R  ER GS G F  GV+ + GG PR VPL    D G VL+   S++  P +S  GE + +  R  ER G  G+F  GV    GG
Sbjct:    1 MTSVCKSDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHTRDVPREAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGTRGRFTPGGRRWVGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAIRPKERLGSRGRFTAGVRGWVGGKPRDVPLPRLRDPGTVLFESASERSRPSMSFSGETNVSGGREDERHGRLGSFEHGVVEARGG 220          
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: D7FZE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE3_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 3.020e-62
Identity = 136/281 (48.40%), Postives = 161/281 (57.30%), Query Frame = 0
Query:   21 SMMSVLTPDLSYLLTFNDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKIDHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLY--VSDKLEPDLS--GEAHTNAARSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDHGEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRHWLGGFP 297
            +M SV  PDLS L TFN  GGR  ER GTRG+FT GVR MSGG  RDV LE ++DHG+VLF S   KPDLS EA TNA+R  ERLG+ G F PG + + GG PRDVPLE + DHGKVL VS   +PDLS EA  N  R TER GS G F  GV+ + GG PR VPL    D G VL+   S++  P LS  GE + +  R  ER G  G+F  GV    GG     PL+      +  + S+  +    G  + N  R   R GP   F  GV    GG P
Sbjct:  289 AMTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSTEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLLVSAVHKPDLSAEARINATRPTERLGSRGRFTAGVRRWGGGEPRDVPLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGG-----PLQV-----QAAFASEVEQLWHEGGQKENKYR---RCGPSH-FVAGVSILSGGMP 555          
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A6H5KAW1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW1_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 8.720e-53
Identity = 99/202 (49.01%), Postives = 126/202 (62.38%), Query Frame = 0
Query:  126 VPLETKYDHGKVLYVSDKLEPDLSGEAHTNTV--RSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLYVSDKLEPDLSGEAHTNAARSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDHGEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRHWLGGFPHDSPVKTEADNGEVHF--VPFKRKPNLS 323
            VP+ T  ++  +  ++   +PDLSG    N    R  ER G+ G+F  GV I  GG  R VPLE + DHG+VL+VS   +PDLS EA TNA R  ERLG+ G F PG + + GG PRD+PLE + DHG+VL+VS   +PDLS EARTN +RP+ER G RG FT GVR W GG P D P+    D G V F     + +P+LS
Sbjct:    6 VPITT-INNDNIRAMTSVHKPDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSAEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLS 206          
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A6H5KBU2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU2_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 4.040e-28
Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
Query:  204 PDLSGEAHTNAA--RSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDHGEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRHWLGGFPHDSPVKTEADNGEVHF--VPFKRKPNLS 323
            PDLSG    N A  R  ER G+ G+F  GV    GG  RD+PLE + DHG+VL+VS   +PDLS EARTN +RP+ER G RG FT GVR W GG P D P+    D G V F     + +P+LS
Sbjct:    7 PDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLS 130          
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A836CPV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPV2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.530e-22
Identity = 77/200 (38.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query:   37 NDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKI-DHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTV--RSTERSGSHGTFAPGVKIFFGGMPRGVPLETKY-DHGEVLYVSDKLEPDLSGEAHTNAARST--ERLGSHGTFAPG 230
            N VGGR  ER G +G +THGV    GG   DV   K+  +HG VLFTS SL+P+L  E    +    ER G  G+ A            DV L+ + +HG +L     L PDLS E  TN    R+TER G+ G+F PG  I  GG  R VP+     + G VL+    L  D +  A       T  ER+G  G+F  G
Sbjct:   13 NAVGGRPDERHGFQGGWTHGVTVFCGGVPHDVRPPKETTNHGTVLFTSASLRPNLEDELRIKSCSDGEREGRSGSQAHWTHP----AHDDVQLD-ELNHGTILATFPHLRPDLSYEGRTNAAGGRATERLGARGSFTPGRAIRAGGPARDVPVPAPILNRGTVLFTLATLACDAAAAAAPALKPGTTDERVGRAGSFEHG 207          
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A6H5KZP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP0_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.280e-19
Identity = 67/162 (41.36%), Postives = 78/162 (48.15%), Query Frame = 0
Query:   22 MMSVLTPDLSYLLTFNDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKIDHGQV-------LFTSDSLK------PDLSGEAHTN-------------AMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLY--VSDKLEPDLSGEAHTN 155
            M SV  PDLS L TFN  GGR   R GTRG+FT GVR MSGG  R V  E ++DHG V       L     L+      P   G  H               A+R TERLGS G F  G++ + GG P DV L    D G VL+   S++  P LS    TN
Sbjct:    1 MTSVYKPDLSGLPTFNVAGGRPDGRFGTRGSFTLGVRIMSGGHARGVPREAEVDHGNVRRAQAGPLRRGPHLRHPPHGAPRNPGPLHAGRTSLGRISPPWPTAIRPTERLGSRGRFTSGIRGWAGGKPPDVTLPRVRDPGTVLFESASERSRPSLSFSGETN 162          
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A835YLE4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.770e-16
Identity = 76/209 (36.36%), Postives = 92/209 (44.02%), Query Frame = 0
Query:   26 LTPDLSYLLTFNDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKID-HGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTV--RSTERSGSHGTFAPGVKIFFGGMPRGVPLETK-YDHGEVLYVSDKLEPDLSGEAHTNAARSTERLGSHGTFAPG 230
            L PDLS L       G + ER      F    R+  G     V L +  + HG VLFTS +LKPDLS    T      ERLG    F    +  L  VP D+    + + G VL     L+P+++    TN    RSTER G  G F PGV    GG    VP+     + G VLY S  L PD S E       S ER G  G+F  G
Sbjct:   39 LKPDLSELPLTKP--GTAGERLARSALF----RSRVGPPIHYVPLSRNNENHGTVLFTSSTLKPDLSEVPLTKPGTDGERLGRSALFRSRARRPLRDVPVDL---AEPNRGTVLCTCPHLQPNMAYSYRTNVAGGRSTERLGVRGGFTPGVVTRAGGPACDVPVAAAPVNRGTVLYTSAALRPDESQELRLKQGTSDERQGRVGSFEHG 238          
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A836CJG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.840e-13
Identity = 69/210 (32.86%), Postives = 92/210 (43.81%), Query Frame = 0
Query:   48 GTRGTFTHGVRTMSGGDRRDVS--LEKKIDHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGT--------FAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTV--RSTERSGSHGTFAPGVKIFFGGMPRG-VPL------------ETKYDHGEVLYVSDKLEPDLSGEAHTN-AARSTERLGSHGTFAPGV 231
            GTRG++ HGV   +GG   D+    +  ++ G VLFTS++L+PDLS    T      ER+G  G+         +              P     D G VL     L+P  + +A  N V  R TER G+ G+F PG +I  GG  R  +PL                D G VL   ++L PDLSG A      R  ER G  G+F  G 
Sbjct:   34 GTRGSWQHGVTVFAGGAPHDMRPPFDTVVNSGTVLFTSETLRPDLSSVPLTKPGWPGERVGRSGSQPHRHARSHSADXXXXXXXXXXXAP-----DRGTVLGEWPHLQP-AAADAGMNVVGGRPTERRGARGSFTPGSRILAGGPARASLPLLPPPEGDXXXXXXDVPDRGRVLSSCERLTPDLSGAARCKPGTRGEERWGRVGSFEGGA 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G1I1_ECTSI2.380e-6554.09Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FZE3_ECTSI3.020e-6248.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAW1_9PHAE8.720e-5349.01Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KBU2_9PHAE4.040e-2850.81Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A836CPV2_9STRA3.530e-2238.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KZP0_9PHAE1.280e-1941.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLE4_9STRA4.770e-1636.36Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CJG1_9STRA3.840e-1332.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9590contigH-elongata_contig9590:540..2189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9590.16988.1mRNA_H-elongata_contig9590.16988.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9590 2..3423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9590.16988.1 ID=prot_H-elongata_contig9590.16988.1|Name=mRNA_H-elongata_contig9590.16988.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MEIIPNSNNRALAGEVLPVISMMSVLTPDLSYLLTFNDVGGRSSERRGTR
GTFTHGVRTMSGGDRRDVSLEKKIDHGQVLFTSDSLKPDLSGEAHTNAMR
STERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSG
EAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLYVSD
KLEPDLSGEAHTNAARSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDH
GEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRHWLGGFPHDS
PVKTEADNGEVHFVPFKRKPNLS*
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