prot_H-elongata_contig95843.16982.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95843.16982.1
Unique Nameprot_H-elongata_contig95843.16982.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length49
Homology
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BLAST of mRNA_H-elongata_contig95843.16982.1 vs. uniprot
Match: D8LKI3_ECTSI (Calpain 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI3_ECTSI)

HSP 1 Score: 47.4 bits (111), Expect = 8.800e-5
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 0 
Query:   17 HSLFDFGSEGDLNLAEVTVLLRTVLLASAK 46
            HSLFDFG +GDL+L EVT+L+RT L+A AK
Sbjct:    2 HSLFDFGLDGDLHLPEVTILVRTALIACAK 31
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95843.16982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKI3_ECTSI8.800e-570.00Calpain 8 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95843contigH-elongata_contig95843:175..321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95843.16982.1mRNA_H-elongata_contig95843.16982.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95843 175..324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95843.16982.1 ID=prot_H-elongata_contig95843.16982.1|Name=mRNA_H-elongata_contig95843.16982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
MALICSASIAEKVDFAHSLFDFGSEGDLNLAEVTVLLRTVLLASAKVK*
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