prot_H-elongata_contig95794.16978.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95794.16978.1
Unique Nameprot_H-elongata_contig95794.16978.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.280e-22
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNTWGVVE 83
            M  E + G  +Y DPL+WWR+    FP LA LARR+LAIPA+QA+SER+FS AG +VT+ RN L    VELLV L+++W +VE
Sbjct:  209 MYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.530e-21
Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    1 MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNTWGVVE 83
            M+      K ++ +PL+ WR   +++P LAALARR+LAIP+SQAQSERVFS+AG  VT TR+RL  +NVELLV L+N WGVV+
Sbjct:  469 MQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVD 551          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.550e-17
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    5 QQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNT 78
            ++ G+ +   PL WWR+   ++P LA+LARR+L IPA QAQSERVFSSAG +VT+TR R+  +NV L+V L+NT
Sbjct:  470 EEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI000C26C2C9 (zinc finger BED domain-containing protein 4-like n=3 Tax=Drosophila willistoni TaxID=7260 RepID=UPI000C26C2C9)

HSP 1 Score: 75.5 bits (184), Expect = 2.320e-15
Identity = 35/82 (42.68%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    2 EHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNTWGVVE 83
            ++ +QN      DPL++W++N ++F  LA  A+++L IP S  +SERVFS AG++V+Q R+RL  K V +L+ALK    ++E
Sbjct:   78 QYLEQNNATQDVDPLDYWKINEIQFGQLAKCAKKILCIPGSSVESERVFSKAGEIVSQKRSRLKPKAVNMLLALKQNQWILE 159          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI000EAB1B8F (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB1B8F)

HSP 1 Score: 74.3 bits (181), Expect = 7.940e-15
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    6 QNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELL 72
            QN  +I     +WW+ N V+FP LAA+AR LLAIPA+Q  SER+FS+AG +V + R+RL S+NVE+L
Sbjct:   99 QNTNVI-----SWWKANIVRFPLLAAVARNLLAIPATQVTSERLFSTAGNIVNEKRSRLCSENVEML 160          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI00109FC612 (zinc finger BED domain-containing protein 4-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI00109FC612)

HSP 1 Score: 73.2 bits (178), Expect = 1.020e-14
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALK 76
            + +E  +G  +  DPL WW+ N  K+P LA +AR  LA+P +   SERVFS+AG +VT  R+ L+ +NV++L+ LK
Sbjct:   53 VSYEAASGIPVDGDPLTWWKSNECKYPHLATMARHHLAVPGTSVPSERVFSTAGDIVTAKRSTLSPENVDILMFLK 128          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI0007B8209D (zinc finger BED domain-containing protein 1-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B8209D)

HSP 1 Score: 73.6 bits (179), Expect = 1.680e-14
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    1 MEHEQQNGKIIYPDPLN-----WWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVAL 75
            +E E QN     P PLN     WW++N ++FP LA LARR L IPA+   SERVFS+AG  VT+ R+RLT  +V +L+ L
Sbjct:   88 IEAELQNFLRETPPPLNCTPTDWWKVNGIRFPGLAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTPDHVNMLIFL 167          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A2G9RVU8_LITCT (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RVU8_LITCT)

HSP 1 Score: 74.3 bits (181), Expect = 2.070e-14
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    7 NGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALK 76
            N   +  DPL WW+ N  K+P +A +AR  LA+P S   SERVFS+AG +VT TR+ L+  NV++LV LK
Sbjct:  146 NSITVDSDPLTWWKSNECKYPHIATMARCYLAVPGSSVPSERVFSTAGDIVTATRSTLSPDNVDILVFLK 215          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A8C1EL35_CYPCA (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EL35_CYPCA)

HSP 1 Score: 75.5 bits (184), Expect = 4.280e-14
Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 MEHEQQNGKIIYPDPLN-----WWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVAL 75
            +E E QN     P PLN     WW++N ++FP LA LARR L IPA+   SERVFS+AG  VT+ R+RLTS +V +L+ L
Sbjct:  395 IEAELQNFLRETPPPLNCTPTDWWKVNGIRFPGLAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTSDHVNMLIFL 474          
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A6P7FJL1_DIAVI (zinc finger BED domain-containing protein 1-like n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FJL1_DIAVI)

HSP 1 Score: 70.1 bits (170), Expect = 6.090e-14
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 0
Query:   14 DPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVAL-KNTW 79
            DPL +W++NT  F P+  L+++ L IPAS  +SER FS+AGQ+V+  R+R+  KNV++LV + KN W
Sbjct:   22 DPLLFWKVNTNDFEPMLELSKKYLCIPASSVESERTFSTAGQIVSDRRSRIKPKNVDMLVFINKNQW 88          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE1.280e-2255.42Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI1.530e-2157.83Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE2.550e-1755.41Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
UPI000C26C2C92.320e-1542.68zinc finger BED domain-containing protein 4-like n... [more]
UPI000EAB1B8F7.940e-1555.22zinc finger BED domain-containing protein 1-like n... [more]
UPI00109FC6121.020e-1444.74zinc finger BED domain-containing protein 4-like n... [more]
UPI0007B8209D1.680e-1450.00zinc finger BED domain-containing protein 1-like n... [more]
A0A2G9RVU8_LITCT2.070e-1450.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Li... [more]
A0A8C1EL35_CYPCA4.280e-1451.25Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cy... [more]
A0A6P7FJL1_DIAVI6.090e-1449.25zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 14..77
e-value: 9.6E-21
score: 73.4
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 14..79
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 14..79
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 13..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95794contigH-elongata_contig95794:905..1153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95794.16978.1mRNA_H-elongata_contig95794.16978.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95794 905..1153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95794.16978.1 ID=prot_H-elongata_contig95794.16978.1|Name=mRNA_H-elongata_contig95794.16978.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVF
SSAGQMVTQTRNRLTSKNVELLVALKNTWGVVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf