prot_H-elongata_contig95777.16975.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95777.16975.1
Unique Nameprot_H-elongata_contig95777.16975.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
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BLAST of mRNA_H-elongata_contig95777.16975.1 vs. uniprot
Match: A0A6H5JUT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.990e-13
Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 0 
Query:    1 LQETKWDGASEIAASGYRIYFIGNRSG-----GQHGVGLAIKKEIVNKAGKDVIAIQCISARLMKARISV-KSNFVTIVVAHAPTE--KATEG----KKIKYIAVLNSNVSSVPAQEYIFILTDAN 114
            LQET+ +G   IA  GY I + G R+G     G HGVG+AIK+ +    G++   ++CIS RLMKAR+ + ++  VT VV +APTE  + T G     K  +   L++ +  V +++++ +L DAN
Sbjct:   17 LQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKARLQIGRTCRVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVYSRDHLVVLMDAN 142
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BLAST of mRNA_H-elongata_contig95777.16975.1 vs. uniprot
Match: H3AI42_LATCH (Uncharacterized protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AI42_LATCH)

HSP 1 Score: 50.1 bits (118), Expect = 7.360e-5
Identity = 33/109 (30.28%), Postives = 59/109 (54.13%), Query Frame = 0 
Query:    7 DGASEIAASGYRIYFIGNRSGGQHGVGLAIKKEIVNKAGKDVIAIQCISARLMKARISVKSN-FVTIVVAHAPTEKATEGKKIKYIAVLNSNVSSVPAQEYIFILTDAN 114
            +G  +    GY  ++ G +    HGVG AIK E++N+  +  I I   + RLM  R+++  N + TI+  +APT  A +  K ++ + L+  +S +P  + + +L D N
Sbjct:   10 EGQLKEQGGGYTFFWKGKQL---HGVGFAIKNELINQLNEFPIGI---NERLMTLRLNLVGNRYATIISVYAPTLDADDEIKEEFYSNLDQVLSGIPEGDRLILLGDFN 112
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95777.16975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUT2_9PHAE2.990e-1338.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3AI42_LATCH7.360e-530.28Uncharacterized protein n=1 Tax=Latimeria chalumna... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..114
e-value: 1.2E-8
score: 37.1
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95777contigH-elongata_contig95777:1936..2292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95777.16975.1mRNA_H-elongata_contig95777.16975.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95777 1936..2292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95777.16975.1 ID=prot_H-elongata_contig95777.16975.1|Name=mRNA_H-elongata_contig95777.16975.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
LQETKWDGASEIAASGYRIYFIGNRSGGQHGVGLAIKKEIVNKAGKDVIA
IQCISARLMKARISVKSNFVTIVVAHAPTEKATEGKKIKYIAVLNSNVSS
VPAQEYIFILTDAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf