prot_H-elongata_contig122126.1693.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122126.1693.1
Unique Nameprot_H-elongata_contig122126.1693.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 9.070e-26
Identity = 52/72 (72.22%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    1 MSGMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRSGGV 72
            M+GMVGGARTALEVGRLLLS+DPLGDPMGCLLALDS+AL SR+G FL+ELHRS+LP+G S  R + + + G 
Sbjct:  377 MAGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSHALTSRQGGFLIELHRSKLPVGRSPSRAAEAFASGA 448          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 4.850e-25
Identity = 52/72 (72.22%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    1 MSGMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRSGGV 72
            M+GMVGGARTALEV RLLLS+DPLGDPMGCLLALDS+ALASR+G FL+ELHRS+LP+G S  R + + + G 
Sbjct:  175 MAGMVGGARTALEVCRLLLSLDPLGDPMGCLLALDSHALASRQGEFLIELHRSKLPVGRSPSRAAEAFASGA 246          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: A0A835ZGE8_9STRA (Transcriptional repressor TCF25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.470e-13
Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    4 MVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFS 60
            M+G  RTA+EV  LLLS+DP+GDPMG LL +D +ALA +EG F+L L  S LPIGFS
Sbjct:  382 MMGCRRTAMEVSHLLLSLDPIGDPMGALLCVDCHALACKEGRFVLSLAASGLPIGFS 438          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: G4YZT6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT6_PHYSP)

HSP 1 Score: 62.0 bits (149), Expect = 1.610e-9
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    3 GMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRS 69
            G  G  R+A E  +LLLS+DP GDPM  LLA+D YAL SR+  FL++L  S+ P   +V+RL+SS +
Sbjct:  807 GRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCRFLIDLFGSKTP---AVDRLASSEA 870          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: F0WU08_9STRA (Uncharacterized protein AlNc14C262G9831 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WU08_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.950e-9
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    2 SGMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRSGGV 72
            +G  G  ++A E+ R++ S+DP GDPM  +LA+D YALASR+  F+LEL  + +P   +++RLSS  S  +
Sbjct:  334 AGRRGCVKSAFELARMIFSLDPHGDPMSVVLAMDYYALASRQYTFILELMDANIP---AIDRLSSCESSSL 401          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: H3GG52_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG52_PHYRM)

HSP 1 Score: 60.8 bits (146), Expect = 4.100e-9
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    3 GMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRS 69
            G  G  R+A E  +LLLS+DP GDPM  +LA+D YAL SR+  FL++L  S+ P   +V+R +SS S
Sbjct:  614 GRRGCMRSAFETAKLLLSLDPQGDPMNVILAIDYYALTSRQCQFLIDLSNSKTP---AVDRFASSDS 677          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: M4BN88_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN88_HYAAE)

HSP 1 Score: 60.1 bits (144), Expect = 7.690e-9
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    3 GMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRSG 70
            G  G  R+A E  +LLLS+DP GDPM  LLA+D YAL SR+  FL++L  S+ P   +V+R +S   G
Sbjct:  453 GRRGCMRSAFETSKLLLSMDPQGDPMNVLLAIDYYALTSRQCQFLIDLVESKTP---AVDRFASGDKG 517          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: W2QZ72_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=W2QZ72_PHYPN)

HSP 1 Score: 59.7 bits (143), Expect = 1.030e-8
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    3 GMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRS 69
            G  G  R+A E  +LLLS+DP GDPM  LLA+D YAL SR+  FL++L  S+ P   +V+R +S  +
Sbjct:  328 GRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP---AVDRFASDEA 391          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: V9EAW3_PHYPR (EDR2_C domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EAW3_PHYPR)

HSP 1 Score: 59.7 bits (143), Expect = 1.040e-8
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    3 GMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRS 69
            G  G  R+A E  +LLLS+DP GDPM  LLA+D YAL SR+  FL++L  S+ P   +V+R +S  +
Sbjct:  581 GRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP---AVDRFASDEA 644          
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Match: A0A662WL33_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WL33_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.240e-8
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    3 GMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLELHRSRLPIGFSVERLSSSRSG 70
            G  G  R+A E  +LLLS+DP GDPM  LLA+D YAL SR+  FL++L  +++    +V+R ++S SG
Sbjct:  217 GRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLVDLFDAKIE---AVDRFATSESG 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122126.1693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK35_ECTSI9.070e-2672.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA68_9PHAE4.850e-2572.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGE8_9STRA3.470e-1363.16Transcriptional repressor TCF25-domain-containing ... [more]
G4YZT6_PHYSP1.610e-950.75Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
F0WU08_9STRA2.950e-943.66Uncharacterized protein AlNc14C262G9831 n=1 Tax=Al... [more]
H3GG52_PHYRM4.100e-949.25Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
M4BN88_HYAAE7.690e-948.53Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
W2QZ72_PHYPN1.030e-847.76Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
V9EAW3_PHYPR1.040e-847.76EDR2_C domain-containing protein n=6 Tax=Phytophth... [more]
A0A662WL33_9STRA1.240e-847.06Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006994TCF25/Rqc1PFAMPF04910Tcf25coord: 7..53
e-value: 1.1E-12
score: 47.7
IPR006994TCF25/Rqc1PANTHERPTHR22684NULP1-RELATEDcoord: 8..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122126contigH-elongata_contig122126:166..381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122126.1693.1mRNA_H-elongata_contig122126.1693.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122126 166..384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122126.1693.1 ID=prot_H-elongata_contig122126.1693.1|Name=mRNA_H-elongata_contig122126.1693.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MSGMVGGARTALEVGRLLLSVDPLGDPMGCLLALDSYALASREGAFLLEL
HRSRLPIGFSVERLSSSRSGGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006994TCF25/Rqc1