prot_H-elongata_contig95064.16917.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95064.16917.1
Unique Nameprot_H-elongata_contig95064.16917.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length289
Homology
BLAST of mRNA_H-elongata_contig95064.16917.1 vs. uniprot
Match: A0A6H5L0B8_9PHAE (Nfu_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0B8_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 4.650e-83
Identity = 169/305 (55.41%), Postives = 199/305 (65.25%), Query Frame = 0
Query:   10 VPAAVEALGGPADSLDPALLMISALGEDGSSLSKKHSEMDGITVRLQVSNGIPIQVEACPPGGTPVRRKLSPRFVDAMNDFVRSSGDEMAFFKGRRWLPRGVRYPED-----------------SNCGAAASAEEALLAVVDEVELAYHESRLRGVVADAV-------QRAPGGGAGSGMAGETGAQAEIKEIQAAAAGLRASTNED---IVAAVDRLCDLAGDAPPPSATNSVDRECSTTARDALDALIGFVSSGTGPVAARRAAVAFVGGVGEAAGATGLDAVASVFRGDRSPGVRRTAGDAL 287
            VPAAV+ALGG A SLDP  L++++ GE GS+   K SEMDGI +RLQVSNGIPIQVEACPPGGTP+RRKLS RFV+AM +FV  SGDEMAFFKGR WLPRGVRYP +                 S   AA  AEEAL A VDEVELAYHESRLRG V  A+       + A            T  ++   E++AA   L+ S   D   +VAAVD LC LAGD                 ++DALDAL+GF +SG GPV ARRAAVA++GG G+AAG+ GL AV++VFRGD + GVRRTAGDAL
Sbjct:  132 VPAAVKALGGAASSLDPLTLLMASGGEGGSAW--KRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDEDGHGEELTGATSKKTAAEFAEEALAAAVDEVELAYHESRLRGAVHAALNLLQKNAEAAEASXXXXXXXXXTSGESTA-EVRAATTVLQRSPAADKGEVVAAVDTLCALAGDG----------------SKDALDALVGFAASGEGPVPARRAAVAYIGGAGDAAGSAGLKAVSAVFRGDNNAGVRRTAGDAL 417          
BLAST of mRNA_H-elongata_contig95064.16917.1 vs. uniprot
Match: A0A7S2XB48_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XB48_9EUKA)

HSP 1 Score: 97.1 bits (240), Expect = 1.080e-19
Identity = 83/251 (33.07%), Postives = 120/251 (47.81%), Query Frame = 0
Query:   39 SSLSKKHSEMDGITVRLQVSNGIPIQVEACPPGGTPVRRKLSPRFVDAMNDFVRSSGDEMAFFKGRRWLPRGVRYPEDSNCGAAASAEEALLAVVDEVELAYHESRLRGVVADAVQRAPGGGAGSGMAGETGAQAEIKEIQAAAAGLRASTNEDIVAAVDRLCDLAGDAPPPSATNSVDRECSTTARDALDALIGFVSSGTGPVAARRAAVAFVGGVGEAAGATG--LDAVASVFRGDRSPGVRRTAGDAL 287
            SS S   SEM GI +RLQVSNGIPIQ+EA    GT  RRKLS RF +++  F+ + G++  FF GR+WL +G+RY         AS  EAL  + DE+E  Y   RL  + ++   +A                  + ++Q     L        +A+VD + ++A     PSA  +        A DAL   +   S          A++  +G   E  G  G  +D ++  F  + +P +RRTAGDAL
Sbjct:    2 SSSSSSSSEMQGIQMRLQVSNGIPIQIEAKSTDGTSDRRKLSGRFEESIMAFLSTPGNDQLFFDGRKWLNKGLRYGH-------ASLSEALDTLADEIETMYPPERLNALASEDSNQA------------------LADLQPLLKDLHD------LASVDTVAEIAQKHEDPSARKA--------AIDALVRFVQRGSGNMATRRHAVASLGIMGDAIEELGVAGAVVDCLSFCFENEPAPFLRRTAGDAL 213          
BLAST of mRNA_H-elongata_contig95064.16917.1 vs. uniprot
Match: A0A7S3YPQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPQ0_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 1.480e-17
Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 0
Query:   14 VEALGGPADSLDPALLMISALGEDGSSLSKKHSEMDGITVRLQVSNGIPIQVEACPPGGTPVRRKLSPRFVDAMNDFVRSSGDEMAFFKGRRWLPRGVRYPEDSNCGAAASAEEALLAVVDEVELAYHESRLRGVVAD 151
            ++ALGG + SL     ++              S+M+GI +RLQVSNGIPIQ+EA    G   RRKLS RF ++++ F+   G++ AFF GR+WL +G+RY          S  EAL  + DE+E  Y   RL+ + A+
Sbjct:   48 IDALGGASPSLSLPTNLLLTEXXXXXXXXXXXSDMEGIQMRLQVSNGIPIQIEAKAMDGMSERRKLSGRFEESISTFLSIPGNDQAFFDGRKWLNKGLRYGH-------VSLSEALDTLADEIETMYPPQRLKALAAE 178          
BLAST of mRNA_H-elongata_contig95064.16917.1 vs. uniprot
Match: A0A7S0H0H6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H0H6_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 1.320e-15
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 0
Query:   50 GITVRLQVSNGIPIQVEA-CPPGGTPVRRKLSPRFVDAMNDFVRSSGDEMAFFKGRRWLPRGVRYPEDSNCGAAASAEEALLAVVDEVELAYHESRLRGVVAD 151
            GI +RLQVSNGIPIQVEA C   GT  R KLS RF +A+ DF++  G+E +FF+GR+WL +G+RY            ++++  +  EVE  Y   RLR +V D
Sbjct:  173 GIKMRLQVSNGIPIQVEATCISDGTSKRYKLSGRFEEAIADFLKIPGNEQSFFQGRKWLNKGIRYE-------TTDIDDSITQMASEVEEMYPAYRLRALVED 268          
BLAST of mRNA_H-elongata_contig95064.16917.1 vs. uniprot
Match: A0A7S3VDY6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDY6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.420e-15
Identity = 100/322 (31.06%), Postives = 137/322 (42.55%), Query Frame = 0
Query:   22 DSLDPALLMISALGEDGSSLSKKHSEMDGITVRLQVSNGIPIQVEACPPGGTPVRRKLSPRFVDAMNDFVR----------SSGDEMAFFKGRRWLPRGVRY-PE----------DSNCGAAASA----------EEALLAVVDEVELAYHESRLRGVVADAVQRAPGGGAGSGMAGETGAQAEIKEIQAAAAGLRASTNEDIV-------------AAVDRLCDLA--GDAPPPSATNSVDRECSTTARDALDALIGFVSSGTGPVAARRAAVAFVGGVGEAAGATG----------LDAVASVFRGDRSPGVRRTAGDAL 287
            D L   LL +++    GS  S   S    + +R+Q SN IPIQVE     GT  RRKLSP+F ++M   ++          ++ +++ FF GR+W+ RG+RY PE          DS    A+S           E  L    DE++ AY   RL G+VA++   +P           T    E +  +        S N   V              AVDR CDLA  GD                    AL  L  FVSS  G + ARR A+AF+GG G+    T             A+ S  + ++SP +RRTAGDAL
Sbjct:  168 DILLQGLLALTSAANAGSPQSASASAGQ-VRMRMQFSNKIPIQVEGTGYLGTVQRRKLSPKFQESMESMMQMQEGDSNSNSATSNKLDFFGGRKWVDRGIRYLPESHDDDGDGSRDSASATASSITPEEQELLELEAVLQTESDEIDAAYSTRRLAGIVANSNDGSP----------LTLTPLEDRNPE------NPSNNXXXVDVEHQNQILILDLEAVDRSCDLAEKGD------------------EQALQVLATFVSSRQGSLPARRNALAFLGGTGDIGLTTEHMNVNSSDLVFMAIVSALQHEKSPIMRRTAGDAL 454          
BLAST of mRNA_H-elongata_contig95064.16917.1 vs. uniprot
Match: A0A1E7EQX7_9STRA (Nfu_N domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQX7_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.750e-12
Identity = 98/342 (28.65%), Postives = 154/342 (45.03%), Query Frame = 0
Query:    5 RFRTQVPAAVEAL--GGPADSLDPA--LLMISALGEDGSSLSKKHSE----MDGITVRLQVSNGIPIQVEACPPGGTPVRRKLSPRFVDAMNDFVRSSGDEMAFFKGRRWLPRGVRY--PED----------------SNC------GAAASAEEALLAV-------VDEVELAYHESRLRGVVADAVQRAPGGGAGSGMAGETGAQAEIKEIQAAAAGLRASTNEDIVAA-VDRLCDLA-GDAPPPSATNSVDRECSTTARDALDALIGFVSSGT-GPVAARRAAVAFVGGVGEAAGATGLD-----------------AVASVFRGDRSPGVRRTAGDAL 287
            ++ + +P  +E+L  G   DS      LL+   L    SS +   ++    M  + +R+Q+SN IPIQ+E     GT  R KL P+F + M +  +   D + FF GR+W+ RG+RY  PED                SN        ++   E+ LL +         EV+ AY   RL  +V+++         G G + +     ++  +          +  D+    VDR C+LA GD        + D    +T  +AL+ L+ FVSS   G +AARR A+A++GG   AA   G+D                 AV+  F+ +++P +RRTAGDA 
Sbjct:  144 KWESVLPLVLESLLEGDDGDSAQQVQELLLPGLLQASSSSSNLNQNDQTTTMGQVRMRIQLSNKIPIQIEGTGSLGTVQRLKLVPKFQEYMEELQQD--DTIDFFAGRKWMDRGIRYYLPEDDGNDKGDDSHETFGNGSNSIDSFTYSSSTEEEKELLGLQFILQTEAKEVDDAYPPQRLARIVSESRLD------GKGRSKDVHPTKKVTPLSVEVESCSPQSPFDLTLEDVDRYCNLADGD------YGNGDINQDSTHLEALNVLVEFVSSSNQGLLAARRNAIAYLGGT--AAAGPGIDNTQTDSTANVMNDRVFHAVSLAFQNEKNPMMRRTAGDAF 469          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95064.16917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L0B8_9PHAE4.650e-8355.41Nfu_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2XB48_9EUKA1.080e-1933.07Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3YPQ0_9EUKA1.480e-1739.13Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S0H0H6_9EUKA1.320e-1546.60Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S3VDY6_9STRA9.420e-1531.06Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A1E7EQX7_9STRA2.750e-1228.65Nfu_N domain-containing protein n=1 Tax=Fragilario... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95064contigH-elongata_contig95064:1160..2394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95064.16917.1mRNA_H-elongata_contig95064.16917.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95064 1160..2394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95064.16917.1 ID=prot_H-elongata_contig95064.16917.1|Name=mRNA_H-elongata_contig95064.16917.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=289bp
MRPLRFRTQVPAAVEALGGPADSLDPALLMISALGEDGSSLSKKHSEMDG
ITVRLQVSNGIPIQVEACPPGGTPVRRKLSPRFVDAMNDFVRSSGDEMAF
FKGRRWLPRGVRYPEDSNCGAAASAEEALLAVVDEVELAYHESRLRGVVA
DAVQRAPGGGAGSGMAGETGAQAEIKEIQAAAAGLRASTNEDIVAAVDRL
CDLAGDAPPPSATNSVDRECSTTARDALDALIGFVSSGTGPVAARRAAVA
FVGGVGEAAGATGLDAVASVFRGDRSPGVRRTAGDALR*
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