prot_H-elongata_contig9505.16915.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9505.16915.1
Unique Nameprot_H-elongata_contig9505.16915.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length165
Homology
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 3.600e-27
Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 0
Query:    7 KMLDLLSRCNHYLNDNPWECPPAPVVEKGIDAMKKYYDELGKTEPV-----FINLRKVVFIGHSGAGKTSLIKSI--KAGKGQLALEKELESVGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRFMNK 148
            ++  L S  N  L DNPW  PP  +V +G+ A++KY  ++ + E        +N+ KVV IG  GAGKTSL+ SI  + G   +   +E+ +VG+ ++ H   +GR     V+ YD AGQV+YYG+HQ FLT RALY+LVWD SR   K
Sbjct:  330 RLGQLASGQNLRLQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRI----VEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGK 474          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.660e-26
Identity = 66/153 (43.14%), Postives = 86/153 (56.21%), Query Frame = 0
Query:    3 EDARKMLDLLSRCNHYLNDNPWECPPAPVVEKGIDAMKKYYDELGKTEPV-----FINLRKVVFIGHSGAGKTSLIKSIKAGKG--QLALEKELESVGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRFMNK 148
            E A + L   S C   L  NPW  PP  VVEKG+ A++ Y  ++ K E        + L KVV +G S AGKTSL+ SI  G+G   +    E+ +VG+ +  H  +      T V+ YD AGQV+YYG+HQ FLT RALY+LVWD  R   K
Sbjct:  165 EHALRWLTRRSECLIVLGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQG-----TAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGK 312          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.060e-21
Identity = 58/150 (38.67%), Postives = 91/150 (60.67%), Query Frame = 0
Query:    3 EDARKMLDLLSRCNHYLNDNPWECPPAPVVEKGIDAMKKYYDELGKTEPV-----FINLRKVVFIGHSGAGKTSLIKSIKAGKGQLA--LEKELESVGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRF 145
            EDA ++++ L   + YL+ NPW  PP  VVE G+ A+K+Y  ++ + +        + L KVV +G + AGKTSL+ SI AG+G        +  +VG+ ++  + +     DT V+ +D AGQV+Y G+HQ FLT RALY+LV D +++
Sbjct:   13 EDALRLVERLGD-SLYLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQ-----DTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKY 156          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 2.160e-21
Identity = 62/145 (42.76%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    4 DARKMLDLLSRCNHY-LNDNPWECPPAPVVEKGIDAMKKYYDEL--GKTEPVFINLRKVVFIGHSGAGKTSLIKSIKAGKGQLALEKELES-VGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASR 144
            D  ++LD+        L+ NPWE PP  +V  G+ A++ YY+ +  G T  V   L KVV IG    GKTSL +SI  G   +     +ES V V V+DHK +        ++++D AGQV YYGL QLFLT RA+Y+LVWDA++
Sbjct:  394 DLARLLDVFDGLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPL-KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGH-----PIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAK 532          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.040e-21
Identity = 60/129 (46.51%), Postives = 79/129 (61.24%), Query Frame = 0
Query:   19 LNDNPWECPPAPVVEKGIDAMKKYYDEL--GKTEPVFINLRKVVFIGHSGAGKTSLIKSIKAGKGQLALEKELES-VGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASR 144
            L+ NPWE PP  +V  G+ A++ YYD +  G T  V   L KVV IG    GKTSL +SI  G   +     +ES V V V+DHK +        ++++D AGQV YYGL QLFLT RA+Y+LVWDA++
Sbjct:  503 LSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPL-KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGH-----PIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAK 625          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.330e-20
Identity = 65/162 (40.12%), Postives = 93/162 (57.41%), Query Frame = 0
Query:    8 MLDLLSRCNHY----LNDNPWECPPAPVVEKGIDAMKKYYDEL--GKTEPVFINLRKVVFIGHSGAGKTSLIKSIKAGKGQLALEKELES-VGVSVQDHKFE--SGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRF--MNKNKVRYLTLSP 158
            +LD   R +      L+ NPWE PP  +V  G+ A++ Y++ +  G T  V   L KVV +G    GKTSL  SIKAGK  +     ++S V V VQDH  +    + G   ++++D AGQ  YYGL QLFLT RA+Y+LVWDA +   M++  +  L ++P
Sbjct:   15 LLDSFDRLHSVGGLDLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTRPL-KVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLAIAP 175          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.370e-20
Identity = 62/141 (43.97%), Postives = 83/141 (58.87%), Query Frame = 0
Query:    8 MLDLLSRCNHY-LNDNPWECPPAPVVEKGIDAMKKYYDEL--GKTEPVFINLRKVVFIGHSGAGKTSLIKSIKAGKGQLALEKELES-VGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASR 144
            +LD L R     +  NPWE PP  +V  GI A++ Y++ +  G T  V   L KVV +G    GKTSL +SIK GK  +      ES V V V+DH  +        ++++D AGQV YYGL QLFLT RA+Y+LVWDA++
Sbjct:  326 LLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPL-KVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGH-----PIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAK 460          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.950e-18
Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 0
Query:    8 MLDLLSRCNHYLNDNPWECPPAPVVEKGIDAMKKYYDELGKT--EPVFINLRKVVFIGHSGAGKTSLIKSIKAGKGQLALEKELESVGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRF 145
            +L  LSR    +++NPW+ PP  VV KGI A+++Y+ +L      PV   + KVV +G  GAGKTSL +S++ G+       E  +V + V+             +++YD AGQV Y GL Q+FL+ RA+ +LV D   F
Sbjct:  234 LLATLSRLGFLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDVNG-----VTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAF 368          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: A0A6H5JQZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.600e-18
Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 0
Query:    8 MLDLLSRCNHY----LNDNPWECPPAPVVEKGIDAMKKYYDEL--GKTEPVFINLRKVVFIGHSGAGKTSLIKSIKAGKGQLALEKELES-VGVSVQDHKFE--SGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRF--MNKNKVRYLTLSP 158
            +LD   R +      L+ NPWE PP  +V  G+ A++ Y++ +  G T  V   L KVV +G    GKTS    IKAGK  +     ++S V V V+DH  +    + G   ++++D AGQ  YYGL QLFLT RA+Y+LVWDA +   M++  +  L ++P
Sbjct:  181 LLDSFDRLHSVGGLNLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTRPL-KVVIVGTETVGKTS----IKAGKPCMTRGGGVDSTVHVDVEDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLAIAP 337          
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.650e-17
Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 0
Query:   19 LNDNPWECPPAPVVEKGIDAMKKYYDELGKTEPVFI--NLRKVVFIGHSGAGKTSLIKSIKAGKGQLALE-KELESVGVSVQDHKFESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRF 145
            L  NPW  PP P+V KG  A++ Y+++L   EP  I  ++ KVV +G  GAGKTSL +S+KA +     E KE  +V   V+  + E      + V++YD AGQV Y GL Q+FLT RA+ VLV +A +F
Sbjct:  155 LGTNPWVEPPEPIVVKGPKAVRGYFEDL-YAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEG-----SSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKF 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9505.16915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVX5_ECTSI3.600e-2742.95LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JW02_9PHAE1.660e-2643.14Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K8T1_9PHAE2.060e-2138.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI2.160e-2142.76LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI4.040e-2146.51LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JRW5_9PHAE1.330e-2040.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJV1_ECTSI1.370e-2043.97LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL98_ECTSI1.950e-1837.86LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JQZ5_9PHAE4.600e-1838.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ8_9PHAE1.650e-1743.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 57..157
e-value: 1.5E-17
score: 65.6
NoneNo IPR availablePFAMPF08477Roccoord: 58..149
e-value: 3.0E-15
score: 56.5
IPR020859Roc domainPROSITEPS51424ROCcoord: 50..164
score: 20.355
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 55..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9505contigH-elongata_contig9505:1599..4920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9505.16915.1mRNA_H-elongata_contig9505.16915.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9505 1300..5310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9505.16915.1 ID=prot_H-elongata_contig9505.16915.1|Name=mRNA_H-elongata_contig9505.16915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
MGEDARKMLDLLSRCNHYLNDNPWECPPAPVVEKGIDAMKKYYDELGKTE
PVFINLRKVVFIGHSGAGKTSLIKSIKAGKGQLALEKELESVGVSVQDHK
FESGRKGDTDVKLYDLAGQVEYYGLHQLFLTERALYVLVWDASRFMNKNK
VRYLTLSPTNKFDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020859ROC_dom
IPR027417P-loop_NTPase