prot_H-elongata_contig9487.16902.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9487.16902.1
Unique Nameprot_H-elongata_contig9487.16902.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig9487.16902.1 vs. uniprot
Match: A0A6H5JK11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK11_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 2.830e-84
Identity = 128/177 (72.32%), Postives = 146/177 (82.49%), Query Frame = 0
Query:    1 MGERSLAMETYRHALDTDPKNKWLQEQVNLAKAEVVNGSKLEPVASLDAWITVFEAMEDSRQRLSTLAHMWNQCALPDRLQIFGAFLLLISG-----TGAHTEDFTEEMMVSLPMDNYEDLK---PVETWMAFFEALNREDKVEGFKRMWEVAEDLEKNVIVNDLRHFFLEPLVNAG 169
            MGER +A+ETYRHALD +PKNKWLQEQV  A+AEVV+ SK+EPV S+DAWI VFE+M DSR+RLSTLAH+WNQC  PDR +IFG FL LI+G     TG   EDFTE+MMVSLPMDNYEDLK   PV+TWMAFF  L R++KV+GFKRMWE  ED EKNVIVNDLRHFFLEPL+N G
Sbjct:   89 MGERGVALETYRHALDIEPKNKWLQEQVRRARAEVVSASKVEPVESVDAWIVVFESMSDSRERLSTLAHLWNQCETPDRHEIFGQFLSLIAGAGTQHTGVKPEDFTEDMMVSLPMDNYEDLKARIPVDTWMAFFRGLTRQEKVQGFKRMWESTEDKEKNVIVNDLRHFFLEPLINGG 265          
BLAST of mRNA_H-elongata_contig9487.16902.1 vs. uniprot
Match: A0A6V1NCR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NCR2_HETAK)

HSP 1 Score: 138 bits (347), Expect = 8.530e-37
Identity = 67/170 (39.41%), Postives = 100/170 (58.82%), Query Frame = 0
Query:    1 MGERSLAMETYRHALDTDPKNKWLQEQVNLAKAEVVNGSKLEPVASLDAWITVFEAMEDSRQRLSTLAHMWNQCALPDRLQIFGAFLLLISGTG----AHTEDFTEEMMVSLPMDNYEDLKPVETWMAFFEALNREDKVEGFKRMWEVAEDLEKNVIVNDLRHFFLEPLV 166
            MG      E YR A  TD  N W + Q   AK E     + EPV++++ W+ +F  +ED R+R+  LA  WN  +  +R  IF  FL +ISG         E+FTE+ MV LPMDNYED++  + W+ F+ + +   K++ F++ W+   D EKN+I+NDL+HFFL P++
Sbjct:   90 MGNLEGVYEAYRAAFQTDSSNDWAKTQYKQAKKEYTTFLREEPVSTIEQWVKLFGMLEDPRERMMQLALFWNASSPAERQSIFHRFLAIISGAAMTDAVAKEEFTEDKMVELPMDNYEDMQKTDAWVDFYTSQDSAAKLDVFEKTWDATTDQEKNIIINDLKHFFLVPVL 259          
BLAST of mRNA_H-elongata_contig9487.16902.1 vs. uniprot
Match: A0A7S2XUE6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUE6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.240e-28
Identity = 64/185 (34.59%), Postives = 106/185 (57.30%), Query Frame = 0
Query:    8 METYRHALDTDPKNKWLQEQVNLAKAEVVNGSKLEPVAS-LDAWITVFEAMEDSRQRLSTLAHMWNQCALPDRLQIFGAFLLLISGT------GAHTEDFTEEMMVSLPMDNYEDLKPVETWMAFFEALNREDKVEGFKRMWEVAEDLEKNVIVNDLRHFFLEPLVNAGLPQGDDENDLEEEGDG 185
            ++ Y+ AL  D K++W+ +Q+  A+  + +  +   +    + W  +F ++ + R+R+ TLA  WN  +  +RL IF  FL +I  +         +E++TE+ M  LPMDNY D +PV+ WM F+ +    +K+  F+ MWE+  D EK VI+NDL+HFFL P++       DD   +EE G+G
Sbjct:  104 VQAYQEALKADSKSQWVAKQLRQARDALNHHWRTNSITGGTEEWKEIFISLTEPRERMFTLACFWNCSSKQERLLIFRRFLDIIGNSPDDARIAPASEEYTEDHMQELPMDNYVDFEPVQPWMDFYTSQESTEKMNTFQLMWELTSDQEKTVIINDLKHFFLVPMLREKGLISDDM--IEENGNG 286          
BLAST of mRNA_H-elongata_contig9487.16902.1 vs. uniprot
Match: A0A7S2SEB7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SEB7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.280e-17
Identity = 44/118 (37.29%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   44 VASLDAWITVFEAMEDSRQRLSTLAHMWNQCALPDRLQIFGAFLLLISGTGAHTEDFTEEMMVSLPMDNYEDLKPVETWMAFFEALNREDKVEGFKRMWEVAEDLEKNVIVNDLRHFF 161
            V S++ +  +F+ M+  R RL+T+A  WN  +  DRL IF AF+ +++G    ++    E + +LPMDNY+D+   +TW  FF +L++ DKV+ F +++    D+E+N+I+ DL+ FF
Sbjct:  147 VESMEHFDEIFKHMKLERMRLATMATFWNASSNQDRLAIFAAFIQVLTG---ESKPIQVESLSALPMDNYKDVVIPQTWTDFFNSLDQGDKVKMFYQIYGHCTDIERNMIIRDLKEFF 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9487.16902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JK11_9PHAE2.830e-8472.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1NCR2_HETAK8.530e-3739.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XUE6_9STRA3.240e-2834.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SEB7_9STRA2.280e-1737.29Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..21
score: 9.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9487contigH-elongata_contig9487:2111..7862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9487.16902.1mRNA_H-elongata_contig9487.16902.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9487 153..8917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9487.16902.1 ID=prot_H-elongata_contig9487.16902.1|Name=mRNA_H-elongata_contig9487.16902.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
MGERSLAMETYRHALDTDPKNKWLQEQVNLAKAEVVNGSKLEPVASLDAW
ITVFEAMEDSRQRLSTLAHMWNQCALPDRLQIFGAFLLLISGTGAHTEDF
TEEMMVSLPMDNYEDLKPVETWMAFFEALNREDKVEGFKRMWEVAEDLEK
NVIVNDLRHFFLEPLVNAGLPQGDDENDLEEEGDGAKDPPSKREPAPAEI
TE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom