prot_H-elongata_contig9486.16900.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9486.16900.1
Unique Nameprot_H-elongata_contig9486.16900.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length396
Homology
BLAST of mRNA_H-elongata_contig9486.16900.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 8.400e-62
Identity = 195/469 (41.58%), Postives = 247/469 (52.67%), Query Frame = 0
Query:    2 KPLVRSKSALSIWASRGGVPPDLDLLPSQEFVE--GLASLGEGSGDEGFKDDGA---------VTGSSAGGGCESRRSRSISGETDLSRSGSQGD----------CDVTPT---------------ETSVGHNHEREKVGSGRWDKELDAITRAAWLGSKQASRRTGFKSNTSSLASTAGSHADS---------------------------PRGSSASRHLQQQQSSPRTVGLHGFSGGRRSPPLQQTLQSHPPPPGAISGDSEADGEEGPNTRRERKAGAGEDEDGSVGRGGELGES---HRVAGNRFLYRVVFDGLNVLVTLAVRDSLLLLVQSGMDIALAALPGISNPSKALLAEEAGGDLLREGNTKRRTSLDLQQFIAKP---PGRRHDSGSL---TPFSKAERQSQDSVESLTGRGRSNSGG--VASGRCAAAAISGGKGGVEEAVMHQLFSIELRRTQIQV 396
            KPLVR +SA   WASRGGVPP L+LLPS        LA + E S DEG    G           +G ++  G E R     SG+   S +   G            D+T                 E +    H   +VGSGRWD+ L A+TRAAWLGSKQAS R GF SN SS+++ + S+  +                           PRG   S H  +   S R +G +    G  +  L  +    PPP  A S D++  G+    +R     G+   E G  GR   +  +    RVAG+ FLYRVVFDGLNVL+TL +RDS+LLLVQSG+++ALA LPG+  PSKALLA+E  G++L  G  +RRTSLDL+QF  KP   PGR+ DSGSL   TPFSKAERQS+DS  SLT           V +G  A+ +I GG+GG     MH+LFSIELRRTQIQ+
Sbjct: 2793 KPLVRGRSARRFWASRGGVPPRLELLPSHSHGHDGALADVDESSADEGTAAAGRHDSPSVRRRKSGDASSPGVEERAGTRASGDCTASEAPEAGAVAAAAEPGVAADITXXXXXXXXXXXXXXDGDENASAAAH--RQVGSGRWDEHLQAVTRAAWLGSKQASSR-GFNSNASSVSAASTSNDPTTRIAXXXXXGAAQLSARGAGGANERFFPRGGRDSCHSAR---SSRDLGDNDRREGAPAGALPTSPPRSPPPAAAASPDTDLGGDGV--SRAGTPGGSSRPEGGRDGRTTRVAAAAADERVAGSGFLYRVVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLAKEREGEVL-PGELRRRTSLDLKQFTDKPLALPGRKRDSGSLGSATPFSKAERQSEDSAYSLTAGAXXXXXXTRVGAGAPASPSIRGGEGGP---AMHKLFSIELRRTQIQL 3249          
BLAST of mRNA_H-elongata_contig9486.16900.1 vs. uniprot
Match: A0A6H5KJB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB8_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 4.800e-15
Identity = 110/346 (31.79%), Postives = 135/346 (39.02%), Query Frame = 0
Query:    2 KPLVRSKSALSIWASRGGVPPDLDLLPSQEFVE--GLASLGEGSGDEGF----KDDGAVTGSSAGG-----GCESRRSRSISGETDLSRSGSQGDC----------DVTPTETSVGHNH-------------EREKVGSGRWDKELDAITRAAWLGSKQASRRTGFKSNTSSLASTA--------------------------------------------GSHADSPRGSSASRHLQQQQSSPRTVGLHGFSGGRRSPPLQQTLQSHPPPPGAISGDSEADGEEGPN--TRRERKAGAGEDEDGSVGRGGELGES----HRVAGNRFLYRVVFDGLNVLVTLAVR 263
            KPLVR +SA   WASRGGVPP L+LLPS        LA + E S DEG     + D        GG     G E   S   SG+   S +   G            D+T    + G +                 +VGSGRWD+ L A+TRAAWLGSKQAS R GF SN SS+                                                    DS   + +SR L             G   GR   P      S PP P   +  +  D + G +  T      G+   E GS GR      +     RVAG+ FLYRVVFDGLN+L+TL +R
Sbjct:  344 KPLVRGRSARRFWASRGGVPPRLELLPSHSHGHDGALADVDESSADEGTAAAGRHDSPSVRKRKGGYASSRGMEEPASTRASGDGTASEAPKAGAAVAAAEPGVAADITTAAATAGVDGGGDEDGDENASAAAHRQVGSGRWDEHLQAVTRAAWLGSKQASSR-GFNSNASSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRFFPPHKSGGGDSCYSARSSRDL-------------GDVDGREGAPAGALPISSPPSPLPAAAAALPDADVGGDGVTGAGTPGGSSRPEGGSDGRKTRATAAATADERVAGSGFLYRVVFDGLNLLITLKLR 675          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9486.16900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7K0_ECTSI8.400e-6241.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJB8_9PHAE4.800e-1531.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9486contigH-elongata_contig9486:176..3724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9486.16900.1mRNA_H-elongata_contig9486.16900.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9486 176..8837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9486.16900.1 ID=prot_H-elongata_contig9486.16900.1|Name=mRNA_H-elongata_contig9486.16900.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=396bp
MKPLVRSKSALSIWASRGGVPPDLDLLPSQEFVEGLASLGEGSGDEGFKD
DGAVTGSSAGGGCESRRSRSISGETDLSRSGSQGDCDVTPTETSVGHNHE
REKVGSGRWDKELDAITRAAWLGSKQASRRTGFKSNTSSLASTAGSHADS
PRGSSASRHLQQQQSSPRTVGLHGFSGGRRSPPLQQTLQSHPPPPGAISG
DSEADGEEGPNTRRERKAGAGEDEDGSVGRGGELGESHRVAGNRFLYRVV
FDGLNVLVTLAVRDSLLLLVQSGMDIALAALPGISNPSKALLAEEAGGDL
LREGNTKRRTSLDLQQFIAKPPGRRHDSGSLTPFSKAERQSQDSVESLTG
RGRSNSGGVASGRCAAAAISGGKGGVEEAVMHQLFSIELRRTQIQV
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