mRNA_H-elongata_contig9485.16898.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: D7FQR0_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQR0_ECTSI) HSP 1 Score: 207 bits (526), Expect = 2.970e-59 Identity = 102/139 (73.38%), Postives = 114/139 (82.01%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVRPQ 417
PQLYV+GEL+GGLDIVK+MK G LAPQLGVT K RLK L++SS +MLFMKGNP SPQCGFSR A+ LLRE+ VEFGTFDIL DDEVRQGLK S WPTYPQLY GGELVGGLDIMKE+ Q+GEL+ A+RPQ
Sbjct: 317 PQLYVQGELVGGLDIVKEMKLEGPLAPQLGVTPKEN---LESRLKRLMTSSPIMLFMKGNPDSPQCGFSRTAVGLLREEGVEFGTFDILADDEVRQGLKKLSEWPTYPQLYCGGELVGGLDIMKEMKQAGELEAALRPQ 452
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: B7ZGM9_9PHAE (Glutaredoxin (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM9_9PHAE) HSP 1 Score: 197 bits (501), Expect = 1.930e-57 Identity = 96/139 (69.06%), Postives = 113/139 (81.29%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVRPQ 417
PQLYVKGEL+GGLDI+K+MK+ G LAPQLG+ K RLK L+SS S++LFMKG P +PQCGFSR AI LLR++ V+FGTFDIL D EVRQGLK FSNWPTYPQLYA GEL+GGLDIMKE+ ++GEL A+RPQ
Sbjct: 151 PQLYVKGELVGGLDILKEMKNDGPLAPQLGIKPKE---SLDSRLKGLISSRSIVLFMKGTPDAPQCGFSRTAIGLLRDEGVDFGTFDILEDQEVRQGLKKFSNWPTYPQLYAQGELLGGLDIMKEMNEAGELGSALRPQ 286
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: A0A1B6ISW9_9HEMI (Thioredoxin domain-containing protein n=2 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6ISW9_9HEMI) HSP 1 Score: 175 bits (444), Expect = 1.440e-48 Identity = 84/140 (60.00%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVRPQS 420
PQLY+ GEL+GGLDIVK++ +SG L L P RLK L++ +VMLFMKG+P SP+CGFS++ +ALL E V+FGTFDIL D+EVRQGLK+FS WPTYPQLY GELVGGLDI+KEL +GEL + ++P S
Sbjct: 189 PQLYISGELVGGLDIVKELVASGELKEML-------PKSLEDRLKKLINQDNVMLFMKGSPNSPKCGFSKQIVALLNETNVKFGTFDILEDEEVRQGLKEFSQWPTYPQLYVRGELVGGLDIVKELQATGELMNTLQPSS 321
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: A0A1B6FH87_9HEMI (Thioredoxin domain-containing protein n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6FH87_9HEMI) HSP 1 Score: 174 bits (442), Expect = 3.150e-47 Identity = 84/140 (60.00%), Postives = 104/140 (74.29%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVRPQS 420
PQLY+ GEL+GGLDIVK++ +SG L L P RLK L++ +VMLFMKG+P SP+CGFS++ +ALL E V+FGTFDIL D+EVRQGLK+FS WPTYPQLY GELVGGLDI+KEL +GEL ++P S
Sbjct: 289 PQLYISGELVGGLDIVKELVASGELKEML-------PKSLEDRLKKLINQDNVMLFMKGSPSSPKCGFSKQIVALLNETNVKFGTFDILEDEEVRQGLKEFSQWPTYPQLYVRGELVGGLDIVKELQATGELMKTLQPSS 421
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: C1BND4_CALRO (Glutaredoxin-3 n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=C1BND4_CALRO) HSP 1 Score: 171 bits (432), Expect = 9.730e-47 Identity = 80/139 (57.55%), Postives = 106/139 (76.26%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVRPQ 417
PQLYV+G LIGGLDI+K+M SG L+ K RLK L + SS+M+FMKG+P+ P+CGFSR+ + +L E+++EFGTFDILGD+EVRQGLK +SNWPTYPQ+Y GELVGGLDI+KEL ++ EL+ ++P+
Sbjct: 192 PQLYVQGNLIGGLDIIKEMHESGELSSVFPKKEK----DLNERLKELTNKSSLMIFMKGSPQEPRCGFSRQLMNILSEEKLEFGTFDILGDEEVRQGLKTYSNWPTYPQVYVKGELVGGLDIIKELKENDELRSTLKPE 326
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: UPI001E1DFED4 (glutaredoxin 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFED4) HSP 1 Score: 170 bits (431), Expect = 1.480e-46 Identity = 81/137 (59.12%), Postives = 107/137 (78.10%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVR 411
PQLY KGEL+GGLDIVK++ SG L QL T + RLK L++SSSVMLFMKG+ ++P+CGFS++ +A++++ V++ TFDIL D+EVRQGLK +SNWPTYPQLY GELVGGLDI+KEL +SGEL+ ++
Sbjct: 195 PQLYAKGELLGGLDIVKELAESGELESQLPKQTSLED-----RLKELINSSSVMLFMKGDREAPRCGFSKQTVAIMKDTGVDYKTFDILSDEEVRQGLKKYSNWPTYPQLYVKGELVGGLDIIKELQESGELETILK 326
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: A0A482SB63_9ARCH (Grx4 family monothiol glutaredoxin n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB63_9ARCH) HSP 1 Score: 165 bits (417), Expect = 4.340e-46 Identity = 79/136 (58.09%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRP---RLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELK 399
PQLYV G L+GGLDIVK+MK G L QLGVT V P+ +P RLK L++ VMLFMKG P P+CGFS + LL + F +F+IL D+EVRQGLK+FS+WPTYPQLY G+LVGGLDI+ E+ + G+LK
Sbjct: 57 PQLYVNGSLVGGLDIVKEMKEQGDLKQQLGVTDPVPPVPPKPLEERLKELINQDVVMLFMKGTPSHPRCGFSSKITDLLTSHHIPFSSFNILSDEEVRQGLKEFSDWPTYPQLYVKGQLVGGLDIVTEMLEGGDLK 192
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: A0A2H4D133_HALDI (Glutaredoxin-3 n=1 Tax=Haliotis discus discus TaxID=91233 RepID=A0A2H4D133_HALDI) HSP 1 Score: 168 bits (425), Expect = 1.130e-45 Identity = 81/137 (59.12%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVR 411
PQLY GEL+GGLDIVK++ +G L QL V K+ RLK LV+ + VMLFMKG P +P+CGFS+ +A+L E V++ TFDIL D+EVRQGLK FSNWPTYPQLY GEL+GGLDI+KEL +SGEL+ ++
Sbjct: 195 PQLYANGELLGGLDIVKELVETGELESQLPVQIKLED-----RLKQLVNKAPVMLFMKGQPDAPRCGFSKTTVAILGETGVKYDTFDILSDNEVRQGLKTFSNWPTYPQLYVNGELIGGLDIIKELKESGELESTLK 326
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: A0A813EM51_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EM51_POLGL) HSP 1 Score: 166 bits (421), Expect = 1.390e-45 Identity = 79/142 (55.63%), Postives = 106/142 (74.65%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRP---RLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVRPQ 417
PQLYV GEL+GG+D++K+M G + T P G +P RLK L+SS+ VMLFMKGNP +P+CGFS + + LL E +++F TFDIL DDEVRQGLK++SNWPTYPQ+YA G+L+GGLDI+KELA G L++ ++ +
Sbjct: 146 PQLYVGGELMGGVDVMKEMDEDGTFMEAMPGGT---PGGEKPLQERLKDLISSNDVMLFMKGNPDTPKCGFSGKIVGLLTEHDIKFSTFDILEDDEVRQGLKEYSNWPTYPQVYAKGKLIGGLDIIKELADEGSLREELQAE 284
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Match: UPI000D7295C5 (glutaredoxin-3-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D7295C5) HSP 1 Score: 167 bits (423), Expect = 2.230e-45 Identity = 81/137 (59.12%), Postives = 104/137 (75.91%), Query Frame = 1
Query: 1 PQLYVKGELIGGLDIVKDMKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFSREAIALLREQEVEFGTFDILGDDEVRQGLKDFSNWPTYPQLYAGGELVGGLDIMKELAQSGELKDAVR 411
PQLYV GELIGGLDIVK+M SG L L + + RLK L + +SVMLFMKG+P++P+CGFS+ + +L E V++ TFDIL D+EVRQGLK FSNWPTYPQLY GEL+GGLDI+KE+ ++GEL+DA++
Sbjct: 197 PQLYVNGELIGGLDIVKEMVESGELKSILPASVDLNA-----RLKDLTNRASVMLFMKGSPENPRCGFSKTMVGILNETGVKYDTFDILADEEVRQGLKAFSNWPTYPQLYVKGELLGGLDIIKEMKENGELQDALK 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9485.16898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9485.16898.1 >prot_H-elongata_contig9485.16898.1 ID=prot_H-elongata_contig9485.16898.1|Name=mRNA_H-elongata_contig9485.16898.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp MKSSGLLAPQLGVTTKVRPLGTRPRLKSLVSSSSVMLFMKGNPKSPQCGFback to top mRNA from alignment at H-elongata_contig9485:3158..4947+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9485.16898.1 ID=mRNA_H-elongata_contig9485.16898.1|Name=mRNA_H-elongata_contig9485.16898.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1790bp|location=Sequence derived from alignment at H-elongata_contig9485:3158..4947+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9485:3158..4947+ >mRNA_H-elongata_contig9485.16898.1 ID=mRNA_H-elongata_contig9485.16898.1|Name=mRNA_H-elongata_contig9485.16898.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig9485:3158..4947+ (Himanthalia elongata Himel1 dioecious)back to top |