mRNA_H-elongata_contig94751.16888.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: A0A6H5KWC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWC9_9PHAE) HSP 1 Score: 115 bits (288), Expect = 4.860e-31 Identity = 51/67 (76.12%), Postives = 58/67 (86.57%), Query Frame = 1
Query: 4 YYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGR 204
Y+ DGSS R++A+VRCPLLCINAEDDP+CQ LFP + A RNP+VIFV T AGGHIGFGEGFNPWGR
Sbjct: 47 YHGDGSSSRYLADVRCPLLCINAEDDPMCQTALFPLEEASRNPWVIFVITKAGGHIGFGEGFNPWGR 113
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: D7FVU4_ECTSI (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU4_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.110e-30 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1
Query: 4 YYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGR 204
Y+RDGSS R++A+VRCPLLCINAEDDPICQ LFP + ARRNP+V+FV T AGGHIGFGEGFNPWGR
Sbjct: 328 YHRDGSSSRYLADVRCPLLCINAEDDPICQTALFPLEEARRNPWVMFVITKAGGHIGFGEGFNPWGR 394
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: A0A397UTY6_9GLOM (Alpha/Beta hydrolase protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UTY6_9GLOM) HSP 1 Score: 76.6 bits (187), Expect = 8.060e-15 Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 4 YYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGRW 207
YYRD SS +V VR PLLC+NAEDDPI PFD + NP+ I TT GGH+G+ GF RW
Sbjct: 298 YYRDASSYFYVTKVRVPLLCLNAEDDPIVSAECLPFDESIYNPYCILATTYCGGHLGWFTGFRSPTRW 365
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: A0A1Y1WZN8_9FUNG (AB-hydrolase YheT n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1WZN8_9FUNG) HSP 1 Score: 75.9 bits (185), Expect = 1.570e-14 Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1 DYYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGRW 207
DYYRD S R + +VR PLLC+NA DDP+ P++A R NP VI TT GGHIG+ G RW
Sbjct: 315 DYYRDASCARFIPDVRVPLLCLNAIDDPVAYHECIPYEACRNNPNVILATTETGGHIGWFTGSTNVTRW 383
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: A0A4P9XWS5_9FUNG (Alpha/Beta hydrolase protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XWS5_9FUNG) HSP 1 Score: 75.9 bits (185), Expect = 1.660e-14 Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 1 DYYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGRW 207
DYYRD SS R + VR PLLC+NA DDP+ + PF+ + NPFVI T GGHIG+ EG RW
Sbjct: 324 DYYRDASSSRWMTRVRVPLLCLNAHDDPVTDVEGAPFEEVKFNPFVIMALTGCGGHIGWFEGTLRPRRW 392
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: A0A485K8V6_9STRA (Aste57867_2374 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8V6_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.660e-13 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 DYYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGF--GEGFNPW 198
+Y+RD S +++ NVR PLLCI+A DDP C + P R+NP +I V TA+GGH+GF G G W
Sbjct: 249 EYFRDASCVKYMHNVRVPLLCISALDDPFCPPGIIPGKLCRQNPKIILVKTASGGHLGFLQGNGMTMW 316
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: UPI001CB8F6A5 (embryogenesis-associated protein EMB8-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8F6A5) HSP 1 Score: 72.0 bits (175), Expect = 4.000e-13 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 4 YYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGRW 207
++R SS R V NV+ PLLCINA DDP+C PFD R+N ++ TT GGH+GF EG + W
Sbjct: 335 FHRWASSVRLVMNVKVPLLCINAIDDPVCTEEAIPFDECRKNKNIVLATTQHGGHLGFFEGMSGKNLW 402
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: A0A8H7UCD0_MORIS (AB hydrolase-1 domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UCD0_MORIS) HSP 1 Score: 71.2 bits (173), Expect = 7.390e-13 Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1 DYYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGRW 207
DYYRD SS + NV+ PLLC NA DDPI + P+D + NP V+ TT GGH+G+ EG RW
Sbjct: 317 DYYRDASSSVVIKNVKIPLLCFNALDDPISPLESIPYDEIKINPNVVLATTQHGGHLGWFEGIWSPTRW 385
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: UPI001CB8F521 (embryogenesis-associated protein EMB8-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8F521) HSP 1 Score: 71.2 bits (173), Expect = 7.410e-13 Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 4 YYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGRW 207
Y+R SS R V NV+ PLLCINA DDP+C PFD R+N ++ TT GGHI F EG W
Sbjct: 332 YHRWASSARLVMNVKVPLLCINAMDDPVCTNEAIPFDECRKNKNIVLATTQHGGHIAFFEGMAGKDLW 399
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Match: A0A397TBR9_9GLOM (Alpha/Beta hydrolase protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TBR9_9GLOM) HSP 1 Score: 70.9 bits (172), Expect = 9.330e-13 Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 4 YYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTTAAGGHIGFGEGFNPWGRW 207
YYRD SS ++ V+ PLLC+NAEDDP+ P+D NP +I TT GGH+G+ G+ RW
Sbjct: 298 YYRDASSSPYITKVKIPLLCLNAEDDPVASQECIPYDECIYNPNIILATTYYGGHLGWFTGWRNPTRW 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94751.16888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94751.16888.1 >prot_H-elongata_contig94751.16888.1 ID=prot_H-elongata_contig94751.16888.1|Name=mRNA_H-elongata_contig94751.16888.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp DYYRDGSSCRHVANVRCPLLCINAEDDPICQMNLFPFDAARRNPFVIFVTback to top mRNA from alignment at H-elongata_contig94751:250..456+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94751.16888.1 ID=mRNA_H-elongata_contig94751.16888.1|Name=mRNA_H-elongata_contig94751.16888.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=207bp|location=Sequence derived from alignment at H-elongata_contig94751:250..456+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94751:250..456+ >mRNA_H-elongata_contig94751.16888.1 ID=mRNA_H-elongata_contig94751.16888.1|Name=mRNA_H-elongata_contig94751.16888.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=414bp|location=Sequence derived from alignment at H-elongata_contig94751:250..456+ (Himanthalia elongata Himel1 dioecious)back to top |