mRNA_H-elongata_contig94745.16887.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: D7G4R4_ECTSI (CAAX prenyl protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R4_ECTSI) HSP 1 Score: 386 bits (992), Expect = 7.290e-131 Identity = 195/230 (84.78%), Postives = 209/230 (90.87%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFSTTAPLITLYLFFAVMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P L CVLKIIELGG+ FYVYVW FMF FS++MLTI P +IMP+FN Y+PLEDGELKS IE LA RV FPL LF VDGSKRSAHSNAYFYGFFKNKRIVL+DTLI QADT EIVSILGHELGHW+MSHTLQGFVI+QTYLLASF AF LATELGE+LRLSFG+ST+A LITLYLFFAVMWAPVDHLLGV MNVLSR+NEF+ADAYAVKLGYSKGLQSGLVKLQLENLGNM
Sbjct: 213 PVLSCVLKIIELGGKHFYVYVWAFMFCFSILMLTIVPTVIMPMFNTYSPLEDGELKSSIENLAKRVSFPLTNLFSVDGSKRSAHSNAYFYGFFKNKRIVLYDTLIKQADTNEIVSILGHELGHWKMSHTLQGFVISQTYLLASFCAFGLATELGESLRLSFGYSTSATLITLYLFFAVMWAPVDHLLGVFMNVLSRKNEFEADAYAVKLGYSKGLQSGLVKLQLENLGNM 442
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: A0A3F2RNA5_9STRA (CAAX prenyl protease n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNA5_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.740e-87 Identity = 140/233 (60.09%), Postives = 180/233 (77.25%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFS--TTAPLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F+FSV+M+T+ PVLIMPLFNK+TPLE+GEL++ IEALAA + FPL KLFV DGSKRS+HSNAYF+GFFK+KRIVLFDTL+ QA EIV++LGHELGHW++ HT QGFVI Q Y+LASF F L E L +SFGF+ + P+I +L F+ MWAPV+H+L L+ + +R+NEFQADA+AV LG+ L+SGL KL +ENL NM
Sbjct: 202 PVTAALIYVIRWGGEYFYMYVWAFLFVFSVIMMTLYPVLIMPLFNKFTPLEEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGFFKSKRIVLFDTLLEQATHDEIVAVLGHELGHWKLWHTAQGFVIQQAYILASFYVFGLCMNDAE-LFVSFGFAGDSAKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDIALKSGLTKLAIENLSNM 433
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: M4BVP2_HYAAE (CAAX prenyl protease n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVP2_HYAAE) HSP 1 Score: 275 bits (703), Expect = 3.830e-87 Identity = 142/233 (60.94%), Postives = 179/233 (76.82%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFS--TTAPLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F+FSVVM+T+ PVLIMPLFNK+TPLE+GEL++ IEALAA ++FPL KLFV DGSKRS+HSNAYF+G FK+KRIVLFDTL+ QA EIV+ILGHELGHWQ+ HT+QGFVI Q Y LASF F L E L SFGF+ + P+I +L F+ MWAPV+H+L L+ + +R+NEFQADA+AV LG+ L+SGL KL +ENL NM
Sbjct: 218 PVTAVLIYMIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPLEEGELRTRIEALAASLKFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWQLWHTVQGFVIQQVYTLASFYMFGLCMNNAE-LFASFGFAGDSAKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGFDAALKSGLTKLAIENLSNM 449
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: A0A3M6VKJ5_9STRA (CAAX prenyl protease n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKJ5_9STRA) HSP 1 Score: 273 bits (699), Expect = 5.420e-87 Identity = 141/233 (60.52%), Postives = 177/233 (75.97%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGF--STTAPLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F+FSV+M+T+ PVLIMPLFNK+TPLE+GEL++ IEALAA + FPL KLFV DGSKRS+HSNAYF+G FK+KRIVLFDTL+ QA EIV+ILGHELGHWQ+SHT Q FVI Q Y+LASF F L E L SFGF + P+I +L F+ MWAP++H+L L+ + +RRNEFQADA+AV LG+ L+SGL KL +ENL NM
Sbjct: 181 PVTAVLIYVIRWGGEYFYMYVWFFLFVFSVIMMTLYPVLIMPLFNKFTPLEEGELRTRIEALAASLHFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLKQATYDEIVAILGHELGHWQLSHTAQSFVIQQVYILASFYMFGLCMNDAE-LFASFGFVGDSAKPVIIGFLLFSQTMWAPIEHVLSFLITLNTRRNEFQADAFAVDLGHDVALKSGLTKLAIENLSNM 412
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: W2QFZ3_PHYPN (CAAX prenyl protease n=16 Tax=Phytophthora TaxID=4783 RepID=W2QFZ3_PHYPN) HSP 1 Score: 274 bits (700), Expect = 1.210e-86 Identity = 141/233 (60.52%), Postives = 179/233 (76.82%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFS--TTAPLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F+FSVVM+T+ PVLIMPLFNK+TPLE+GEL++ IEALAA + FPL KLFV DGSKRS+HSNAYF+G FK+KRIVLFDTL+ QA EIV+ILGHELGHW++ HT QGFVI Q Y+LASF F L E L SFGF+ ++ P+I +L F+ MWAPV+H+L L+ + +R+NEFQADA+AV LG+ L+SGL KL +ENL NM
Sbjct: 222 PVTAALIYVIRWGGEYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPLEEGELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAE-LFASFGFAGDSSKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVDLGHDVALKSGLTKLAIENLSNM 453
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: A0A7S2RC14_9STRA (CAAX prenyl protease n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC14_9STRA) HSP 1 Score: 273 bits (698), Expect = 3.530e-86 Identity = 140/231 (60.61%), Postives = 170/231 (73.59%), Query Frame = 1
Query: 1 APALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFSTTAPLITLYLFFAVMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
AP L +LKII+ GG +FY+YVW FMF FS+ LTI PV I PLFNKYTPL+DGELK I +LAA+ +FPL KLFVVDGSKRS+HSNAYFYGFFKNKRIVLFDTLI Q T+E+ ++LGHE+GHW H +QGFVITQ Y+LA+F+AF L SFGF++ L+ L LFF +WAPVD L ++ V +RRNEF AD Y+V L Y LQ GLVK+ +ENL +
Sbjct: 238 APVLFALLKIIDWGGPYFYLYVWAFMFGFSLFFLTIFPVYIQPLFNKYTPLDDGELKDRIFSLAAKCKFPLTKLFVVDGSKRSSHSNAYFYGFFKNKRIVLFDTLIKQMSTSELEAVLGHEIGHWAHGHVIQGFVITQLYILAAFTAFGYFLH-DPQLYASFGFTSQPTLVGLLLFFQTIWAPVDKFLNFVLTVNTRRNEFMADRYSVALDYGALLQRGLVKMFIENLSGL 467
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: D0NKQ3_PHYIT (CAAX prenyl protease n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NKQ3_PHYIT) HSP 1 Score: 272 bits (695), Expect = 7.000e-86 Identity = 139/233 (59.66%), Postives = 178/233 (76.39%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFS--TTAPLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F FSV+M+T+ PVLIMPLFNK+TPLE+G+L++ IEALAA + FPL KLFV DGSKRS+HSNAYF+G FK+KRIVLFDTL+ QA EIV++LGHELGHW++ HT QGFVI Q Y+LASF F L E L SFGF+ + P+I +L F+ MWAPV+H+L LM + +R+NEFQADA+AV LG++ L+SGL KL +ENL NM
Sbjct: 223 PVTAALIYVIRWGGEYFYMYVWAFLFAFSVIMMTLYPVLIMPLFNKFTPLEEGDLRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAVLGHELGHWKLWHTAQGFVIQQVYILASFYVFGLCMNDAE-LFASFGFAGDSAKPVIIGFLLFSQTMWAPVEHVLSFLMTLNTRKNEFQADAFAVDLGHAVALKSGLTKLAIENLSNM 454
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: A0A225VQY6_9STRA (CAAX prenyl protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY6_9STRA) HSP 1 Score: 271 bits (694), Expect = 7.310e-86 Identity = 140/233 (60.09%), Postives = 178/233 (76.39%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFS--TTAPLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F FSVVM+T+ PV IMPLFNK+TPLE+GEL++ IEALAA++ FPL KLFV DGSKRS+HSNAYF+G FK+KRIVLFDTL+ QA EIV+ILGHELGHW++ HT+QGFVI Q Y+LASF F L E L SFGF+ + P+I +L F+ MWAPV+H+L L+ + +R+NEFQADA+AV LG+ L+SGL KL +ENL NM
Sbjct: 212 PVTAVLIYVIRWGGEYFYMYVWAFLFTFSVVMMTLYPVFIMPLFNKFTPLEEGELRTRIEALAAKLHFPLAKLFVTDGSKRSSHSNAYFFGLFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTMQGFVIQQVYVLASFYVFGLCMNDAE-LFTSFGFAGDSAKPVIIGFLLFSQTMWAPVEHVLSFLITLNTRKNEFQADAFAVGLGHDVALKSGLTKLAIENLSNM 443
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: A0A0P1ABC5_PLAHL (CAAX prenyl protease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABC5_PLAHL) HSP 1 Score: 268 bits (685), Expect = 1.060e-84 Identity = 139/233 (59.66%), Postives = 175/233 (75.11%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFSTTA--PLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F+FSV+M+T+ PVLIMPLFNK+TPLE+G L++ IEALA+ + FPL KLFV DGSKRS+HSNAYF+G F +KRIVLFDTL+ QA EIV+ILGHELGHW++ HT Q FVI Q Y+LASF F E L SFGF+ A P+I +L F+ MWAPV+H+L LM + +R+NEFQADA+AV LGYS L+SGL KL +ENL NM
Sbjct: 196 PVTSALIYVIRWGGEYFYMYVWAFLFVFSVIMMTLYPVLIMPLFNKFTPLEEGVLRTRIEALASSLNFPLTKLFVTDGSKRSSHSNAYFFGLFNSKRIVLFDTLLEQATNDEIVAILGHELGHWKLWHTAQSFVIQQLYILASFYVFGRCMNDAE-LFASFGFADDAAKPVIIGFLLFSQTMWAPVEHVLSFLMTLNTRKNEFQADAFAVDLGYSVSLKSGLTKLAIENLSNM 427
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Match: A0A484EA69_BRELC (CAAX prenyl protease n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA69_BRELC) HSP 1 Score: 267 bits (683), Expect = 5.350e-84 Identity = 138/233 (59.23%), Postives = 177/233 (75.97%), Query Frame = 1
Query: 4 PALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPLEDGELKSGIEALAARVRFPLMKLFVVDGSKRSAHSNAYFYGFFKNKRIVLFDTLINQADTTEIVSILGHELGHWQMSHTLQGFVITQTYLLASFSAFALATELGEALRLSFGFS--TTAPLITLYLFFA-VMWAPVDHLLGVLMNVLSRRNEFQADAYAVKLGYSKGLQSGLVKLQLENLGNM 693
P ++ +I GG +FY+YVW F+F+FSVVM+T+ PVLIMPLFNK+TPL+ EL++ IEALAA + FPL KLFV DGSKRS+HSNAYF+GFFK+KRIVLFDTL+ QA EIV+ILGHELGHW++ HT QGFVI Q Y+LASF F L E L SFGF+ + P+I +L F+ +WAPV+H+L L+ + +R+NEF+ADA+AV LG+ L+SGL KL +ENL NM
Sbjct: 230 PVTAALIYVIRWGGAYFYMYVWAFLFVFSVVMMTLYPVLIMPLFNKFTPLDQSELRTRIEALAASLNFPLTKLFVTDGSKRSSHSNAYFFGFFKSKRIVLFDTLLEQATHDEIVAILGHELGHWKLWHTAQGFVIQQMYILASFYVFGLCMNDAE-LFASFGFAGDSAKPIIIGFLLFSQTVWAPVEHVLSFLITLNTRKNEFEADAFAVDLGHDIPLKSGLTKLAIENLSNM 461 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94745.16887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94745.16887.1 >prot_H-elongata_contig94745.16887.1 ID=prot_H-elongata_contig94745.16887.1|Name=mRNA_H-elongata_contig94745.16887.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp APALVCVLKIIELGGRFFYVYVWGFMFIFSVVMLTIAPVLIMPLFNKYTPback to top mRNA from alignment at H-elongata_contig94745:263..2515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94745.16887.1 ID=mRNA_H-elongata_contig94745.16887.1|Name=mRNA_H-elongata_contig94745.16887.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2253bp|location=Sequence derived from alignment at H-elongata_contig94745:263..2515- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94745:263..2515- >mRNA_H-elongata_contig94745.16887.1 ID=mRNA_H-elongata_contig94745.16887.1|Name=mRNA_H-elongata_contig94745.16887.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1428bp|location=Sequence derived from alignment at H-elongata_contig94745:263..2515- (Himanthalia elongata Himel1 dioecious)back to top |