prot_H-elongata_contig122083.1688.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig122083.1688.1
Unique Name	prot_H-elongata_contig122083.1688.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	199

Homology

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: D7FNX4_ECTSI (Putative anion:sodium symporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNX4_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 1.250e-102
Identity = 168/196 (85.71%), Postives = 182/196 (92.86%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVA---PTIISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPVRAPTFDRKVKERFEKV 193
            MMTTITTLGAIVMTPLLCK++LGTVVPVDA+GIA ST+QVVLAPI+VGMMTNKFFP  V AVLPVTPVVGVLSTCFLVASAVA   PTIIS+G+ALQIPI+LLHL+GGLIGY LP+ MGFSEVS+RTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSM+AI+WRYIPV  P FDR VK RFEK+
Sbjct:  190 MMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIVVGMMTNKFFPSVVKAVLPVTPVVGVLSTCFLVASAVAQVAPTIISAGLALQIPIILLHLLGGLIGYFLPKAMGFSEVSSRTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMMAIIWRYIPVETPKFDRGVKGRFEKI 385

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A836CI93_9STRA (Putative anion:sodium symporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI93_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.340e-101
Identity = 165/196 (84.18%), Postives = 182/196 (92.86%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVA---PTIISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPVRAPTFDRKVKERFEKV 193
            MMTTITTLGAIVMTPLLCK++LG VVPVDA+GIA ST++VVLAPI VGM TNK+FPK V AVLP+TPVVGVLSTCFLVASAVA   PTIIS+GIALQIPI+LLHL+GGL+GY +PR +GFSEVS+RTMAIETSMKSSAFGFLLAKLHFGSFEARVPAA+SVVWMAITGS+LAIVWRYIPV+AP FDR VK RFEKV
Sbjct:  131 MMTTITTLGAIVMTPLLCKLLLGAVVPVDALGIARSTVEVVLAPIAVGMATNKYFPKLVKAVLPITPVVGVLSTCFLVASAVAQVAPTIISAGIALQIPIILLHLVGGLLGYLVPRKLGFSEVSSRTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAVSVVWMAITGSLLAIVWRYIPVKAPKFDRGVKARFEKV 326

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A7S1XKP9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKP9_9STRA)

HSP 1 Score: 258 bits (660), Expect = 4.110e-82
Identity = 135/193 (69.95%), Postives = 165/193 (85.49%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVA---PTIISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPVRAPTFDRKVKERF 190
            +MTT+TT GAIV TPLLCK++LG VVPV+A+GIAVSTIQVVLAPI +GM  NKFFPKAV +VLP+TPV+G  STC LVA++VA   P I+++G+ LQ P++LLHL+GGLIGY+LPR +GFSE S+RTMAIET+MKSSAFGFLLAKLHF  F  RVP+A+SVVWMAITGS LA+ WRY+PV   TFDRK+ E++
Sbjct:  213 LMTTVTTFGAIVFTPLLCKVLLGAVVPVNAVGIAVSTIQVVLAPIFLGMTLNKFFPKAVKSVLPLTPVIGTFSTCLLVAASVAQCAPDIMNAGLKLQFPVLLLHLVGGLIGYSLPRKLGFSETSSRTMAIETAMKSSAFGFLLAKLHFVDFAVRVPSAVSVVWMAITGSALAVFWRYMPVPRATFDRKLPEKY 405

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A7S1D1B0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1B0_CYCTE)

HSP 1 Score: 253 bits (645), Expect = 1.730e-81
Identity = 132/181 (72.93%), Postives = 158/181 (87.29%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPT---IISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPVR 178
            +MTT TT+GAI MTPLLCK +LGTVVPVDA+GIA+ST+QVVLAPI +GM TNKFFP  V  VLP  PVVGV+STC LVASAVA     I+ +G++LQIP++LLHL+GGL+GY LPR  GF+EVS+RTMAIETSMKSSAFGFLLAKLHFG + ARVP+A+SVVWMA+TGS+LA++WRYIPV+
Sbjct:  106 LMTTATTIGAIFMTPLLCKALLGTVVPVDAVGIAMSTLQVVLAPIAIGMTTNKFFPGFVKTVLPFAPVVGVVSTCLLVASAVAQVAAPILDAGVSLQIPVLLLHLVGGLVGYFLPRLTGFNEVSSRTMAIETSMKSSAFGFLLAKLHFGEYAARVPSAVSVVWMALTGSILAVIWRYIPVK 286

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A1E7FNI1_9STRA (BASS family transporter: sodium ion/bile acid n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNI1_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.870e-80
Identity = 132/181 (72.93%), Postives = 153/181 (84.53%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPT---IISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPVR 178
            +MTT TT+GAI MTPL+CK +LGTVVPVDA GIA STIQVVL PI VGM TNKFFP  V  +LP+TPV+GVLSTC LVASAVA     I+++G+ LQ PI LLHLIGGL+GY LP+  GF EV +RTMAIETSMKSSAFGFLLAKLHFG + ARVP+A+SVVWMA+TGSMLA++WRYIPV+
Sbjct:   83 LMTTATTVGAIFMTPLICKGLLGTVVPVDAAGIAFSTIQVVLGPIAVGMATNKFFPNFVKKILPITPVIGVLSTCMLVASAVAQVTEPILNAGLQLQAPIFLLHLIGGLVGYGLPKLTGFGEVKSRTMAIETSMKSSAFGFLLAKLHFGQYAARVPSAVSVVWMALTGSMLAVIWRYIPVK 263

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A7S1E294_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E294_9STRA)

HSP 1 Score: 249 bits (637), Expect = 4.130e-80
Identity = 130/180 (72.22%), Postives = 158/180 (87.78%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPT---IISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPV 177
            +MTT TT+GAI MTPLLCK +LGTVVPVDA+GIA ST+QVVLAPI +GM  N+FFPK V A+LP+TPVVGVLSTC LVASAVA     I+++G+ LQ+P++LLH++GGL+GY LP+  GF EV++RTMAIETSMKSSAFGFLLAKLHFG + ARVP+A+SVVWMA+TGSMLA+VWRYIP+
Sbjct:  118 LMTTATTVGAIFMTPLLCKAVLGTVVPVDAVGIAKSTLQVVLAPIALGMTANQFFPKFVKAILPITPVVGVLSTCMLVASAVAQVSEPIMNAGLTLQLPLLLLHVVGGLVGYFLPKATGFDEVTSRTMAIETSMKSSAFGFLLAKLHFGEYAARVPSAVSVVWMALTGSMLAVVWRYIPI 297

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A448ZNR0_9STRA (Uncharacterized protein n=3 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZNR0_9STRA)

HSP 1 Score: 252 bits (643), Expect = 8.220e-80
Identity = 133/180 (73.89%), Postives = 156/180 (86.67%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPT---IISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPV 177
            +MTT TTLGAI MTPL+CK +LGTVVPVDA+GIA+STIQVVLAPI +GM TNKFFP  V  +LP+TPVVGVLSTC LVASAVA     I+++G+ LQ P+ LLHL+GGL+GY LP+  GFSEV +RTMAIETSMKSSAFGFLLAKLHFG + ARVP+A+SVVWMA+TGS+LA+VWRYIPV
Sbjct:  211 LMTTATTLGAIFMTPLICKAVLGTVVPVDAVGIAMSTIQVVLAPIAIGMTTNKFFPNFVKXILPITPVVGVLSTCLLVASAVAQVSEPIMNAGLQLQTPVFLLHLLGGLVGYFLPKLTGFSEVKSRTMAIETSMKSSAFGFLLAKLHFGQYAARVPSAVSVVWMALTGSLLAVVWRYIPV 390

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A7S2RGT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGT9_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.760e-79
Identity = 131/188 (69.68%), Postives = 156/188 (82.98%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPT---IISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPVRAPT-FDR 184
            +MTT TT+GAI MTP LCK+ LG VVPVDA GIA+ST+QVVLAPI +GM    FFPK V+ +LP  PVVGV+STC LVASAVA     I+S+G++LQ+P +LLHLIGGL+GYALP+  GF EV+ RTMAIETSMKSSAFGFLLAKLHFG + ARVPAA+SVVWMA+TGS+LA++WRY+PV  P  FDR
Sbjct:    9 LMTTATTVGAIFMTPFLCKLALGAVVPVDATGIAISTLQVVLAPIALGMSFKSFFPKFVDKILPFAPVVGVVSTCLLVASAVAQVADPIMSAGLSLQLPCLLLHLIGGLVGYALPKMSGFGEVACRTMAIETSMKSSAFGFLLAKLHFGEYAARVPAAVSVVWMALTGSILAVIWRYVPVEPPKKFDR 196

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: A0A7S1FU32_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU32_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.040e-79
Identity = 135/194 (69.59%), Postives = 163/194 (84.02%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPT---IISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPVRAP-TFDRKVKERF 190
            +MTT TTLGAI MTPLLCK +LG +VPVDA+GIA+STIQVVLAPI VGM  NK FPK V A+LP  PVVGV+STC LVASAVA     I ++G++LQIP++LLHL+GGL+G+ LP+ +GF EV+ RTMAIETSMKSSAFGFLLAKLHFG + ARVP+A+SVVWMA+TGSMLA++WRYIPV  P  FDR + E++
Sbjct:  215 LMTTATTLGAIFMTPLLCKTLLGAIVPVDAVGIAMSTIQVVLAPIAVGMFLNKNFPKVVKAILPFAPVVGVVSTCLLVASAVAQVAEPIRNAGMSLQIPVLLLHLLGGLVGFILPKLLGFGEVACRTMAIETSMKSSAFGFLLAKLHFGQYAARVPSAVSVVWMALTGSMLAVIWRYIPVPQPKVFDRSLLEKY 408

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BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Match: B8CAH3_THAPS (Sodium dependent bile acid symporter n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAH3_THAPS)

HSP 1 Score: 246 bits (628), Expect = 3.150e-79
Identity = 131/180 (72.78%), Postives = 154/180 (85.56%), Query Frame = 0

Query:    1 MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMMTNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPT---IISSGIALQIPIVLLHLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEARVPAAISVVWMAITGSMLAIVWRYIPV 177
            +MTT TT+GAI+MTP LCK MLG VVPVDA GIA+STIQVVLAPI +GM  NKFFPK V A+LP  PVVGV+STC LVASAVA     I+++GI LQIP++LLHL+GG++GY LP+  GF EV +RTMAIETSMKSSAFGFLLAKLHFG + ARVP+A+SVVWMA+TGS+LA+VWRYIPV
Sbjct:   83 LMTTATTVGAILMTPFLCKSMLGAVVPVDARGIAMSTIQVVLAPIAIGMTANKFFPKIVKAILPFAPVVGVVSTCLLVASAVAQVSEPILNAGIGLQIPVLLLHLLGGIVGYWLPKLTGFGEVKSRTMAIETSMKSSAFGFLLAKLHFGDYIARVPSAVSVVWMALTGSLLAVVWRYIPV 262

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot

BLAST of mRNA_H-elongata_contig122083.1688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNX4_ECTSI	1.250e-102	85.71	Putative anion:sodium symporter n=2 Tax=Ectocarpus...	[more]
A0A836CI93_9STRA	1.340e-101	84.18	Putative anion:sodium symporter n=1 Tax=Tribonema ...	[more]
A0A7S1XKP9_9STRA	4.110e-82	69.95	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S1D1B0_CYCTE	1.730e-81	72.93	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A1E7FNI1_9STRA	3.870e-80	72.93	BASS family transporter: sodium ion/bile acid n=1 ...	[more]
A0A7S1E294_9STRA	4.130e-80	72.22	Hypothetical protein n=1 Tax=Thalassionema nitzsch...	[more]
A0A448ZNR0_9STRA	8.220e-80	73.89	Uncharacterized protein n=3 Tax=Pseudo-nitzschia T...	[more]
A0A7S2RGT9_9STRA	1.760e-79	69.68	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]
A0A7S1FU32_9STRA	2.040e-79	69.59	Hypothetical protein n=2 Tax=Corethron hystrix Tax...	[more]
B8CAH3_THAPS	3.150e-79	72.78	Sodium dependent bile acid symporter n=1 Tax=Thala...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002657	Bile acid:sodium symporter/arsenical resistance protein Acr3	PFAM	PF01758	SBF	coord: 1..82 e-value: 3.1E-10 score: 40.0
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 1..180 e-value: 5.6E-41 score: 142.5
IPR004710	Bile acid:sodium symporter	PANTHER	PTHR10361	SODIUM-BILE ACID COTRANSPORTER	coord: 1..179
None	No IPR available	PANTHER	PTHR10361:SF62	SODIUM/PYRUVATE COTRANSPORTER BASS2, CHLOROPLASTIC	coord: 1..179
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 61..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 131..148
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 154..175
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 176..198
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 112..130
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 93..111
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 50..60
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 28..49
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 149..153
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..27
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 88..92
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 153..175
None	No IPR available	TMHMM	TMhelix		coord: 58..80
None	No IPR available	TMHMM	TMhelix		coord: 87..109

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig122083	contig	H-elongata_contig122083:95..1967 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig122083.1688.1	mRNA_H-elongata_contig122083.1688.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig122083 95..1973 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig122083.1688.1 ID=prot_H-elongata_contig122083.1688.1|Name=mRNA_H-elongata_contig122083.1688.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MMTTITTLGAIVMTPLLCKIMLGTVVPVDAIGIAVSTIQVVLAPILVGMM
TNKFFPKAVNAVLPVTPVVGVLSTCFLVASAVAPTIISSGIALQIPIVLL
HLIGGLIGYALPRYMGFSEVSARTMAIETSMKSSAFGFLLAKLHFGSFEA
RVPAAISVVWMAITGSMLAIVWRYIPVRAPTFDRKVKERFEKVREKSK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002657	BilAc:Na_symport/Acr3
IPR038770	Na+/solute_symporter_sf
IPR004710	Bilac:Na_transpt