mRNA_H-elongata_contig94572.16878.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig94572.16878.1
Unique NamemRNA_H-elongata_contig94572.16878.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: D8LU47_ECTSI (T-complex protein 1 subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU47_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 4.020e-91
Identity = 139/145 (95.86%), Postives = 144/145 (99.31%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VLDGVMFNKDVTHSKMRR+IENPR+LLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAF PDI+ITEKGVSDLAQHYLMKADITAFRRLRK+DNNRIARAVGATVV+RPDEIQESDIGTGCGLFEVRKIGDE
Sbjct:  212 VLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDE 356
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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S2SP58_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP58_9STRA)

HSP 1 Score: 271 bits (692), Expect = 1.810e-86
Identity = 129/145 (88.97%), Postives = 143/145 (98.62%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VLDGVMFNKDVTH+KMRR+IENPRILLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA RPDI+ITEKGVSDLAQHYL+KA+ITAFRRLRK+DNNR+ARA GAT+V+RPDEIQESD+GTGCGLFEV+KIGDE
Sbjct:  214 VLDGVMFNKDVTHAKMRRRIENPRILLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENLCAQIVAVRPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARACGATIVSRPDEIQESDVGTGCGLFEVKKIGDE 358
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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A836CR16_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR16_9STRA)

HSP 1 Score: 270 bits (689), Expect = 7.480e-86
Identity = 129/145 (88.97%), Postives = 142/145 (97.93%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VLDGVMFNKDVTH++MRR+IE+PRILLLDCPLEYKKGES TNVEVT+E+DWNTLLRMEEEY+ENICAQIVAF+PDI+ITEKGVSDLAQHY MKA+IT FRRLRKSDNNR+ARAVGAT+V+RPDEIQESDIGTGCGLFEVRKIGDE
Sbjct:  213 VLDGVMFNKDVTHARMRRRIESPRILLLDCPLEYKKGESATNVEVTQEDDWNTLLRMEEEYVENICAQIVAFKPDIVITEKGVSDLAQHYFMKANITCFRRLRKSDNNRVARAVGATIVSRPDEIQESDIGTGCGLFEVRKIGDE 357
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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S2FP00_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FP00_9STRA)

HSP 1 Score: 268 bits (686), Expect = 2.990e-85
Identity = 127/145 (87.59%), Postives = 143/145 (98.62%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VL+GVMFNKDVTH+KMRR+IENPR+LLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA +PDI+ITEKGVSDLAQHYL+KA+ITAFRRLRK+DNNR+ARA GAT+V+RPDEIQESD+GTGCGLFEVRKIGDE
Sbjct:  242 VLNGVMFNKDVTHAKMRRRIENPRVLLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENMCAQIVAVKPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARATGATIVSRPDEIQESDVGTGCGLFEVRKIGDE 386
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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S0XH28_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XH28_9STRA)

HSP 1 Score: 260 bits (664), Expect = 3.440e-84
Identity = 126/145 (86.90%), Postives = 137/145 (94.48%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VLDGVMFNKDVTHSKMRR+I NPR+LLLDCPLEYKKGESQTNVE+  EED+N+LLR EEEYIEN+CA IVAF+PDI+ITEKGVSDLAQHY +KA ITAFRR+RK+DNNRIARA GATVVNRPDEIQESDIGTGCGLFEVRKIGDE
Sbjct:   47 VLDGVMFNKDVTHSKMRRRIVNPRVLLLDCPLEYKKGESQTNVEIMNEEDFNSLLRQEEEYIENMCASIVAFKPDIVITEKGVSDLAQHYFLKAGITAFRRIRKTDNNRIARATGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 191
[Close]
BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: W7TWK9_9STRA (T-complex protein 1 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWK9_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.410e-83
Identity = 126/145 (86.90%), Postives = 139/145 (95.86%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            V+DGVMFNKDVTHSKMRR+IE PRILLLDCPLEYKKGESQTNVEV +EEDWNTLLRMEEE+IE +CA+IVAFRPDI+ITEKGVSDLAQHYL+KA +TAFRR+RKSDNNRIARAVGA +V+RPDEIQE D+GTGCGLFEVRKIGDE
Sbjct:  220 VIDGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGESQTNVEVKQEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGAVIVSRPDEIQEGDVGTGCGLFEVRKIGDE 364
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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A7S2M669_9STRA (T-complex protein 1 subunit gamma (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M669_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.790e-80
Identity = 119/145 (82.07%), Postives = 136/145 (93.79%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VL GVMFNKDVTHSKMRR+IENPRILLLD PLEYKKGESQTNVE+T EEDWNTLL+MEEEY+EN+C +I+AF+PDI+ITEKGVSDLAQHY  KA+ITAFRRLRK+DNNR+ARA GAT+V+R DEI+E DIGTGCGLFE+RKIG+E
Sbjct:  229 VLSGVMFNKDVTHSKMRRRIENPRILLLDSPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIREEDIGTGCGLFEMRKIGEE 373
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BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: M4B2C9_HYAAE (T-complex protein 1 subunit gamma n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2C9_HYAAE)

HSP 1 Score: 256 bits (653), Expect = 2.820e-80
Identity = 121/145 (83.45%), Postives = 137/145 (94.48%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VL GVMFNKDVTHSKMRR+IENPRILLLDCPLEYKKGESQTNVE+T ++DWNTLLR+EEEYIEN+CAQ+VA +PD++ITEKGVSDLAQHY +KA ITAFRRLRK+DNNR+ARA GAT+V+R DEIQESDIGT CGLFEVRK+GDE
Sbjct:  248 VLKGVMFNKDVTHSKMRRRIENPRILLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDE 392
[Close]
BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: W2GRE9_PHYPR (T-complex protein 1 subunit gamma (Fragment) n=29 Tax=Oomycota TaxID=4762 RepID=W2GRE9_PHYPR)

HSP 1 Score: 255 bits (652), Expect = 4.160e-80
Identity = 120/145 (82.76%), Postives = 137/145 (94.48%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VL GVMFNKDVTHSKMRR+IENPR+LLLDCPLEYKKGESQTNVE+T ++DWNTLLR+EEEYIEN+CAQ+VA +PD++ITEKGVSDLAQHY +KA ITAFRRLRK+DNNR+ARA GAT+V+R DEIQESDIGT CGLFEVRK+GDE
Sbjct:  250 VLKGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDE 394
[Close]
BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Match: A0A6S9KVF4_HETAK (T-complex protein 1 subunit gamma n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KVF4_HETAK)

HSP 1 Score: 254 bits (649), Expect = 4.650e-80
Identity = 119/145 (82.07%), Postives = 135/145 (93.10%), Query Frame = 1 
Query:    1 VLDGVMFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKSDNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE 435
            VLDGVMFNKD+TH KMR+ IENPR++LLDC LEYKKGESQTNVE+TKEEDWNTLLRMEEEYIENICAQIVA RPD++ITEKGVSDLAQHY +KA ITAFRRLRKSDNNR+ARA GAT+V+R +E++E DIGTGCG FE+RK+GDE
Sbjct:  212 VLDGVMFNKDITHPKMRKSIENPRVMLLDCSLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVALRPDVVITEKGVSDLAQHYFVKAGITAFRRLRKSDNNRVARATGATIVSRTEELREEDIGTGCGRFEMRKVGDE 356
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94572.16878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU47_ECTSI4.020e-9195.86T-complex protein 1 subunit gamma n=1 Tax=Ectocarp... [more]
A0A7S2SP58_9STRA1.810e-8688.97T-complex protein 1 subunit gamma n=1 Tax=Rhizochr... [more]
A0A836CR16_9STRA7.480e-8688.97T-complex protein 1 subunit gamma n=1 Tax=Tribonem... [more]
A0A7S2FP00_9STRA2.990e-8587.59T-complex protein 1 subunit gamma n=1 Tax=Florenci... [more]
A0A7S0XH28_9STRA3.440e-8486.90T-complex protein 1 subunit gamma n=1 Tax=Chromuli... [more]
W7TWK9_9STRA1.410e-8386.90T-complex protein 1 subunit gamma n=2 Tax=Monodops... [more]
A0A7S2M669_9STRA1.790e-8082.07T-complex protein 1 subunit gamma (Fragment) n=1 T... [more]
M4B2C9_HYAAE2.820e-8083.45T-complex protein 1 subunit gamma n=2 Tax=Hyaloper... [more]
W2GRE9_PHYPR4.160e-8082.76T-complex protein 1 subunit gamma (Fragment) n=29 ... [more]
A0A6S9KVF4_HETAK4.650e-8082.07T-complex protein 1 subunit gamma n=1 Tax=Heterosi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94572contigH-elongata_contig94572:466..2377 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.2
Seed ortholog evalue8.7e-72
Seed eggNOG ortholog2880.D8LU47
Preferred nameCCT3
KEGG koko:K09495
GOsGO:0000003,GO:0000902,GO:0001101,GO:0002199,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0005975,GO:0006457,GO:0006458,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006884,GO:0007154,GO:0007165,GO:0007166,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0008152,GO:0008361,GO:0009311,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009751,GO:0009826,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0009992,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019953,GO:0022414,GO:0022607,GO:0023052,GO:0030104,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032502,GO:0032535,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033043,GO:0033044,GO:0035036,GO:0036211,GO:0040007,GO:0042221,GO:0042493,GO:0042592,GO:0042623,GO:0043170,GO:0043209,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043933,GO:0044085,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046677,GO:0046931,GO:0048518,GO:0048522,GO:0048589,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055082,GO:0060255,GO:0060341,GO:0060560,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070202,GO:0070203,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:0140096,GO:1901564,GO:1901700,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
EggNOG free text desc.unfolded protein binding
EggNOG OGsCOG0459@1,KOG0364@2759
Ec32 ortholog descriptionT-complex protein 1, gamma subunit
Ec32 orthologEc-16_000190.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size438
Cds size423
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94572.16878.1prot_H-elongata_contig94572.16878.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig94572 466..2362 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931341.8127356-CDS-H-elongata_contig94572:465..6121622931341.8127356-CDS-H-elongata_contig94572:465..612Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig94572 466..612 -
1691679797.1156464-CDS-H-elongata_contig94572:465..6121691679797.1156464-CDS-H-elongata_contig94572:465..612Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig94572 466..612 -
1622931341.8329508-CDS-H-elongata_contig94572:1345..15221622931341.8329508-CDS-H-elongata_contig94572:1345..1522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig94572 1346..1522 -
1691679797.1328988-CDS-H-elongata_contig94572:1345..15221691679797.1328988-CDS-H-elongata_contig94572:1345..1522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig94572 1346..1522 -
1622931341.8559394-CDS-H-elongata_contig94572:2263..23621622931341.8559394-CDS-H-elongata_contig94572:2263..2362Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig94572 2264..2362 -
1691679797.144123-CDS-H-elongata_contig94572:2263..23621691679797.144123-CDS-H-elongata_contig94572:2263..2362Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig94572 2264..2362 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931341.8732388-UTR-H-elongata_contig94572:2362..23771622931341.8732388-UTR-H-elongata_contig94572:2362..2377Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig94572 2363..2377 -
1691679797.1542225-UTR-H-elongata_contig94572:2362..23771691679797.1542225-UTR-H-elongata_contig94572:2362..2377Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig94572 2363..2377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig94572.16878.1

>prot_H-elongata_contig94572.16878.1 ID=prot_H-elongata_contig94572.16878.1|Name=mRNA_H-elongata_contig94572.16878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
MFNKDVTHSKMRRKIENPRILLLDCPLEYKKGESQTNVEVTKEEDWNTLL
RMEEEYIENICAQIVAFRPDIIITEKGVSDLAQHYLMKADITAFRRLRKS
DNNRIARAVGATVVNRPDEIQESDIGTGCGLFEVRKIGDE*
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mRNA from alignment at H-elongata_contig94572:466..2377-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig94572.16878.1 ID=mRNA_H-elongata_contig94572.16878.1|Name=mRNA_H-elongata_contig94572.16878.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1912bp|location=Sequence derived from alignment at H-elongata_contig94572:466..2377- (Himanthalia elongata Himel1 dioecious)
GTGTTGGATGGTGTCATGTTTAACAAAGACGTGACCCACTCCAAGATGAG
ACGGAAGATCGAGAACCCCCGCATCCTCCTGCTGGACTGCCCCCTGGAGT
ACAAGAAAGGAGAGGTGTGTTCAGCATAGCATAGGTCCAGCCCTAGCCTT
TTAGAGCTGCCATATTATCAAAGCCCAAGTATCAGGTGTAAGGACTTCCG
CGATGGTATTTAGTATTGCCTGTGTCATCTATACGCCGGAATGGCTTGGG
CTGATTGTTGGTTGCCTTCCTCGTCTCGTTCATCAAGGCGCAGGCTGGAT
ACGATACGGGCGTTGTGTAAAGAGCACGGGTTTTCTACATGAAGTCAGCC
CATTCACTTTCCTTGCCGTCCGGTTACTTTTAAGAAAGGAGGGCGTGACT
TCCAACGCAGAATTCGAGTCAGTTTCCCCTCAGGCACGACCACCGATGTT
CTTCCCGCTATTAGTAGTAGGCCTGAAGTACAAAATAGATGTATTATAGA
TGTATTCATCAATATATATGACAAGCTTGAGTATGTCTACGACATATGGT
CATTTGGGGGTTTCGCTAGATTTCGGCTTCGCTCCCCTTCCCCCGCGGAA
AAACGCCTCCGCCGAGCTCAACCAACGTTGACTCTACAGATGACGAAGAA
ATATATTGATGTCAACTTGCTATTTTTTTCGTTGTTTGCCAGGGGGACGA
AGCACACATTGTTCAAAACATTTTATAACCCAATCCCTTGTCCTCTCCCA
TAAATCGTAATTAGACGAAGTTAACAATTAAGTGGTCCAGTTGAAGAGCG
CAGGCATATCTCTCCTTGTTCCACACCGCGTATGGCTAAAAAAACGCCTC
CTCAGAGCCAAACCAACGTGGAGGTGACGAAGGAAGAGGACTGGAATACG
CTCCTGAGGATGGAAGAGGAGTATATCGAGAACATCTGTGCGCAGATTGT
GGCCTTTCGCCCCGACATCATCATCACGGAGAAGGGCGTCAGCGATCTCG
CCCAGCACTACCTGATGAAGGCCGACATTACGGTGGGTTATAGGGGGGGG
GCTGACGAGCAATGTCCCCGACGGGGTTTTTTGCGGGGGTGAGGATAGTC
GTTCCCGTACCCTGTGTGTCTGTCTGTGACTATTAATTATATTGGTTTTA
CCGTTTTGTGGTGAGCGATGCGTCATTACGGCCGGCATCACGGCCGGTGC
TTCCGCAATGGAATAGCCCCATTGCCGTTGGGGATGACGATAGCCGTCCG
CTTATTGGGTACGCCAGCTTGTGTTTACTAGGCAAGACATAAGACATTAT
GGCGGGTGATTCAACCATGGAAATTACGTCTTGTCTATGGAAATCAAAGT
GTTAGGTGTTATTCGATGTGCCGTATCGATGTGCCGTATCAAGCGTAGAC
GTTGACGTGCAATCATTCATTTCGGAATGTTCGGGGGTTTTTGCGATCGA
GGATACACCGTACCGTACCGTCCATTTCGACTATAATATTAAAGTTATAA
TATATCATATATCGAAATGCATCGTGGTGTTTTTGCAACACATGCTAGAA
TATATTTTTATTAAAAAGACATGGTTCATCTAAGCCAAAGTCATAACGAC
TTCCGGACCCCGCCTCAAAACTCACAATGCACATTTTAGCACCATGATTC
ATTTATTTTTCTCGATCAGGAACAATGGGGTCCGATTTCCGGGTAGGTTT
TTTTTTTTGTATGTTTTCTTCTGTGACGTTTTTCTTTTTGGTCTTTTCGT
TTTCCGAGAGTGCAGGCGTTCCGCAGGCTGCGCAAGTCCGACAACAACCG
CATCGCTCGGGCGGTAGGAGCAACGGTGGTGAACAGGCCGGACGAGATTC
AGGAGTCGGACATCGGCACAGGCTGTGGGCTGTTCGAGGTCCGCAAGATT
GGGGATGAGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig94572:466..2377-

>mRNA_H-elongata_contig94572.16878.1 ID=mRNA_H-elongata_contig94572.16878.1|Name=mRNA_H-elongata_contig94572.16878.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=846bp|location=Sequence derived from alignment at H-elongata_contig94572:466..2377- (Himanthalia elongata Himel1 dioecious)
ATGTTTAACAAAGACGTGACCCACTCCAAGATGAGACGGAAGATCGAGAA
CCCCCGCATCCTCCTGCTGGACTGCCCCCTGGAGTACAAGAAAGGAGAGA
TGTTTAACAAAGACGTGACCCACTCCAAGATGAGACGGAAGATCGAGAAC
CCCCGCATCCTCCTGCTGGACTGCCCCCTGGAGTACAAGAAAGGAGAGAG
CCAAACCAACGTGGAGGTGACGAAGGAAGAGGACTGGAATACGCTCCTGA
GGATGGAAGAGGAGTATATCGAGAACATCTGTGCGCAGATTGTGGCCTTT
CGCCCCGACATCATCATCACGGAGAAGGGCGTCAGCGATCTCGCCCAGCA
CTACCTGATGAAGGCCGACATTACGAGCCAAACCAACGTGGAGGTGACGA
AGGAAGAGGACTGGAATACGCTCCTGAGGATGGAAGAGGAGTATATCGAG
AACATCTGTGCGCAGATTGTGGCCTTTCGCCCCGACATCATCATCACGGA
GAAGGGCGTCAGCGATCTCGCCCAGCACTACCTGATGAAGGCCGACATTA
CGGCGTTCCGCAGGCTGCGCAAGTCCGACAACAACCGCATCGCTCGGGCG
GTAGGAGCAACGGTGGTGAACAGGCCGGACGAGATTCAGGAGTCGGACAT
CGGCACAGGCTGTGGGCTGTTCGAGGTCCGCAAGATTGGGGATGAGTGAG
CGTTCCGCAGGCTGCGCAAGTCCGACAACAACCGCATCGCTCGGGCGGTA
GGAGCAACGGTGGTGAACAGGCCGGACGAGATTCAGGAGTCGGACATCGG
CACAGGCTGTGGGCTGTTCGAGGTCCGCAAGATTGGGGATGAGTGA
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