prot_H-elongata_contig9455.16875.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9455.16875.1
Unique Nameprot_H-elongata_contig9455.16875.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length289
Homology
BLAST of mRNA_H-elongata_contig9455.16875.1 vs. uniprot
Match: D7FNT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT9_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 5.270e-54
Identity = 104/203 (51.23%), Postives = 132/203 (65.02%), Query Frame = 0
Query:   95 MPMDSKNPFSEDILDSMRTAIAILTTRLQREKPITRSEFERFESAVALIVEDALPKQELLTQAMPSRPPTNAVSTRPRAKPPAIADGSSVVDDDEDV--------NEGPRWDP-KGGYGLPSGVRNSYVIEDMGKMNPEEYQAALRRKVIARAQSARKTGSYGNISAKEYVAFLGKNPTAGDDACESHKKDVAERHNEDFGRY 288
            MP  +++PFSE + + +R AI IL  RLQREKP++R EFERFESAV +IVEDALP Q+L +   P+ P +   +    A PP +A   S V + +           EGP WD  K  YGLP G RN+Y I+DM KMNPEEYQAALR KV+ RAQS RKTGSYGNI + EY+ FLGKNP  GD+  + +++ V  +  EDF  Y
Sbjct:    1 MPQVAESPFSESLQEELRVAIKILAARLQREKPMSRQEFERFESAVGVIVEDALPLQKLPS---PASPASXEAAXXXAAAPPRLAVTQSPVPNADSXXXXXXXFETEGPEWDAEKVQYGLPMGARNTYDIDDMEKMNPEEYQAALREKVVERAQSVRKTGSYGNIVSNEYLKFLGKNPKTGDEKFKKNEEFVKSKGREDFRSY 200          
BLAST of mRNA_H-elongata_contig9455.16875.1 vs. uniprot
Match: A0A836C7S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.650e-29
Identity = 76/216 (35.19%), Postives = 117/216 (54.17%), Query Frame = 0
Query:   50 SYADKLREARAAKEAASRGRSPPLSPTAASDTIPAAIVAGGGGGAMPMDSKN-PFSEDILDSMRTAIAILTTRLQREKPITRSEFERFESAVALIVEDALPKQELLTQAMPSRPPTNAVSTRPRAKPPAIADGSSVVDDDEDVNEGPRWDPKGGYGLPSGVRNSYVIEDMGKMNPEEYQAALRRKVIARAQSARKTGSYGNISAKEYVAFLGKNPT 264
            SY ++L+ A+ AK A  +  +PP +   A+    AA+         P+ +   PF++++ + ++TAI +L+ RL+   P+ R EF+RFE A+  I++DA+P                                     +  + +EGP WD   GYG+P GVRNSY I+ M  M+P++YQAALR KV+ R   ARKTG+YGN +A  Y++FL K+PT
Sbjct:   41 SYMERLKAAQEAKAAKKQAAAPPAAVAPATXXXVAAVSE-------PLSAAAAPFTDEMQEHLQTAINLLSRRLKSGVPLNRPEFDRFEEAIDAIIKDAVPHLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGME-SEGPAWDASKGYGMPVGVRNSYTIDGMDDMSPDDYQAALREKVLKRVTKARKTGNYGNRAANAYLSFLDKSPT 248          
BLAST of mRNA_H-elongata_contig9455.16875.1 vs. uniprot
Match: A0A7S0BY33_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY33_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.200e-12
Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 0
Query:  188 DEDVNEGPRWDPKGGYGLPSGVRNSYVIEDMGKMNPEEYQAALRRKVIARAQSARKTGSYGNISAKEYVAFLG 260
            D  ++EGP +  KGG GL SG +N+YVIE M +M+PEEY+ AL+  + AR    R+TG++GN+S++ Y++ +G
Sbjct:  138 DMSLDEGPAYTGKGGMGLASGTKNTYVIEGMDEMSPEEYREALQGSISARQDKRRETGTFGNMSSENYLSAIG 210          
BLAST of mRNA_H-elongata_contig9455.16875.1 vs. uniprot
Match: A0A7S4NI70_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI70_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.250e-8
Identity = 61/206 (29.61%), Postives = 91/206 (44.17%), Query Frame = 0
Query:   95 MPMDSKNP--FSEDILDSMRTAIAILTTRLQREKP--ITRSEFERFESAVALIVEDALPKQELLTQAMPSRPPTNAVSTRPRAKP--------------------PAIADGSSVVDDDEDVNEGPRWDPKGGYGLPSGVRNSYVIEDMGKMNPEEYQAALRRKVIARAQSARKT--GSYGNISAKEYVAFLGKNPTAGDDACESHK 274
            +P D   P  F +D+LD  +  +  L  R+ +E P  ++  E   FE+A   IVED   K   L     S P   A +                           PA  D  +V+   ++  EG  ++ KGG G+ SG RN+YVI  M +M  EEYQ AL++ V  R +  R+   G+ GN +   Y+  LG   T+ + A E  +
Sbjct:  119 LPEDDDFPTLFDDDVLDDFQQCLLKLEKRV-KEGPGSLSAEEVLEFEAATGRIVEDMHGK---LNGEATSAPEAKAAAXXXXXXXXXXXXXXXXXXXXXAVTTGVPADPDMPNVIPTSDE--EGKAYEGKGGMGMASGTRNTYVIPGMDEMTAEEYQVALQKSVSERQERRRREMRGTIGNRAGHSYLESLGWGGTSANLAAEDEE 318          
BLAST of mRNA_H-elongata_contig9455.16875.1 vs. uniprot
Match: A0A7S1UWT3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWT3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.410e-7
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 0
Query:  188 DEDVNEGPRWDPKGGYGLPSGVRNSYVIEDMGKMNPEEYQAALRRKVIARAQSARKTGSYGNISAKEYVAFLGKNPTAGDDACESHKKD 276
            D   +EGP +   G  G P+G RN+YVI+ M +M+PEEY+ AL++ V+A+ +  RK+G  GN  +  Y+  L  +   G    E  +KD
Sbjct:  151 DTSNDEGPAY--TGTMGQPAGTRNTYVIDGMDEMSPEEYRQALQQSVVAKQRERRKSGMAGNYGSLSYMNSLSNSGDTGSLKHEILEKD 237          
BLAST of mRNA_H-elongata_contig9455.16875.1 vs. uniprot
Match: A0A7R9Z5D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z5D6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.010e-7
Identity = 33/79 (41.77%), Postives = 46/79 (58.23%), Query Frame = 0
Query:  184 VVDDDEDVNEGPRWDPKGGYGLPSGVRNSYVIEDMGKMNPEEYQAALRRKVIARAQSARKT--GSYGNISAKEYVAFLG 260
            ++D   D  EGP +  KGG GL SG RN+++I  M +M  EEYQ AL++ V  R +  RK   G+ GN +   Y+  LG
Sbjct:   58 IIDTSND--EGPAYTGKGGLGLASGTRNTWIIPGMDEMTAEEYQQALQKSVSERQERRRKEMRGTVGNRAGNSYLDTLG 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9455.16875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FNT9_ECTSI5.270e-5451.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7S9_9STRA1.650e-2935.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0BY33_9STRA1.200e-1246.58Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4NI70_9STRA7.250e-829.61Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1UWT3_9STRA3.410e-738.20Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9Z5D6_9STRA4.010e-741.77Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..288
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.495
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9455contigH-elongata_contig9455:5505..7942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9455.16875.1mRNA_H-elongata_contig9455.16875.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9455 5443..8483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9455.16875.1 ID=prot_H-elongata_contig9455.16875.1|Name=mRNA_H-elongata_contig9455.16875.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=289bp
MRKSIVVAFGAAAAVLLPVGDGFISPRGVSHLALLGQGLEKRTTVTPVMS
YADKLREARAAKEAASRGRSPPLSPTAASDTIPAAIVAGGGGGAMPMDSK
NPFSEDILDSMRTAIAILTTRLQREKPITRSEFERFESAVALIVEDALPK
QELLTQAMPSRPPTNAVSTRPRAKPPAIADGSSVVDDDEDVNEGPRWDPK
GGYGLPSGVRNSYVIEDMGKMNPEEYQAALRRKVIARAQSARKTGSYGNI
SAKEYVAFLGKNPTAGDDACESHKKDVAERHNEDFGRY*
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