prot_H-elongata_contig122059.1685.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122059.1685.1
Unique Nameprot_H-elongata_contig122059.1685.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Match: D8LRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN6_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.480e-16
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    1 ATNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKVKHVP---LSRARSIV 62
            ATNNTDY LLAS DVSIF DN+FVTKT LASVSPG+SF+T LG DPA+K+   P    S+ R I+
Sbjct:  403 ATNNTDYLLLASNDVSIFFDNSFVTKTSLASVSPGESFQTFLGIDPAVKIIVAPPRKTSKKRGII 467          
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Match: D8LRM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM9_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.400e-16
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 ATNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKVKHVP 54
            ATNNTDY LLAS+DVSIF DN+FV KT L SVSPG+SF+T LG DPA+KVK  P
Sbjct:  564 ATNNTDYLLLASEDVSIFFDNSFVAKTSLTSVSPGESFQTFLGIDPAVKVKVAP 617          
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Match: D8LRN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN8_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 8.640e-16
Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 ATNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKVKHVP 54
            ATNNTDY LLAS DVSIF DN+FVTKT L SVSPG+SF+T LG DPA+K+   P
Sbjct:  435 ATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAP 488          
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Match: D8LRN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN5_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 8.650e-16
Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 ATNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKVKHVP 54
            ATNNTDY LLAS DVSIF DN+FVTKT L SVSPG+SF+T LG DPA+K+   P
Sbjct:  477 ATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAP 530          
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Match: A0A6H5KAH2_9PHAE (DUF4139 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH2_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 3.000e-15
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 ATNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKVKHVPLSR 57
            ATNNTDY LLAS DVSIF DN+F+TKT L SV PG+SF+T LG DPA+K+   PL +
Sbjct:  313 ATNNTDYLLLASNDVSIFFDNSFITKTSLTSVCPGESFQTFLGIDPAVKITVGPLRK 369          
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Match: D8LRN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN7_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.010e-15
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 ATNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKVKHVP 54
            ATNNTDY LLAS +VSIF DN+FVTKT L+SVSPG+SF+T LG DPA+K+   P
Sbjct:  446 ATNNTDYLLLASNNVSIFFDNSFVTKTSLSSVSPGESFQTFLGIDPAVKITVAP 499          
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Match: UPI001C7A6863 (uncharacterized protein n=1 Tax=Guyanagaster necrorhizus MCA 3950 TaxID=1450536 RepID=UPI001C7A6863)

HSP 1 Score: 50.1 bits (118), Expect = 1.780e-5
Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 TNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKVKHVPLSR 57
            TN +DY LLA    SI+ D +F+++++L SVSP +SF   LG DP++++ + P S+
Sbjct:  386 TNASDYSLLAGS-ASIYVDGSFISRSLLPSVSPQESFDCPLGLDPSLRITYHPQSK 440          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122059.1685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LRN6_ECTSI2.480e-1666.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRM9_ECTSI3.400e-1674.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN8_ECTSI8.640e-1672.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN5_ECTSI8.650e-1672.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAH2_9PHAE3.000e-1566.67DUF4139 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LRN7_ECTSI3.010e-1570.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001C7A68631.780e-542.86uncharacterized protein n=1 Tax=Guyanagaster necro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011935Conserved hypothetical protein CHP02231PANTHERPTHR31005UNCHARACTERIZEDcoord: 1..60
NoneNo IPR availablePANTHERPTHR31005:SF8coord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122059contigH-elongata_contig122059:370..558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122059.1685.1mRNA_H-elongata_contig122059.1685.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122059 370..558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122059.1685.1 ID=prot_H-elongata_contig122059.1685.1|Name=mRNA_H-elongata_contig122059.1685.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
ATNNTDYQLLASKDVSIFADNNFVTKTVLASVSPGDSFRTCLGTDPAIKV
KHVPLSRARSIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011935CHP02231