prot_H-elongata_contig94061.16839.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94061.16839.1
Unique Nameprot_H-elongata_contig94061.16839.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length40
Homology
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: D8LIL5_ECTSI (Cyclin D1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL5_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.750e-15
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            M KYVDFFANLCQQ YQFQRY+PSHIAAA+IL ARRALCI
Sbjct:  206 MNKYVDFFANLCQQGYQFQRYKPSHIAAAAILTARRALCI 245          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A835ZBR6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR6_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.620e-15
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            MKKYV+FFANLCQQDY FQR+RPS IAAASIL ARRALCI
Sbjct:  147 MKKYVEFFANLCQQDYSFQRHRPSTIAAASILAARRALCI 186          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A7S2LEN5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEN5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.030e-8
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            ++KY +FF NLC QDY F +YRPS +AAA I+ +R+ALCI
Sbjct:  217 VRKYAEFFCNLCLQDYSFSQYRPSVLAAAIIVASRQALCI 256          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A1E7FL21_9STRA (Cyclin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL21_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.120e-7
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            MKKY DFF NL  Q+Y FQ+Y PSH+AAA IL +R AL I
Sbjct:  161 MKKYADFFCNLTLQEYSFQQYLPSHLAAAVILASRVALNI 200          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: K0RL28_THAOC (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RL28_THAOC)

HSP 1 Score: 51.6 bits (122), Expect = 1.860e-6
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            +KKY DFF NL  Q+Y FQ+Y PSH+AAA +L +R AL I
Sbjct:  538 IKKYADFFCNLTLQEYSFQKYLPSHLAAAILLASRVALQI 577          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A7S2FS20_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FS20_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 2.290e-6
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            ++KY +FFANLC QDY +Q++ PS +AAA +  AR AL +
Sbjct:   69 VQKYTEFFANLCMQDYLYQQFSPSLLAAAIVYSARHALSV 108          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A7S0FMS6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMS6_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.460e-6
Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            +KKY DFF NL  Q+Y FQ+Y PS +AAA ++ +R AL +
Sbjct:   62 VKKYADFFCNLTMQEYSFQKYLPSQLAAAILMASREALSV 101          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A8K1FAI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAI4_PYTOL)

HSP 1 Score: 51.2 bits (121), Expect = 2.490e-6
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    2 KKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRAL 38
            KKY DFF +LC Q+YQFQ YRPS +AA+ +  +R+AL
Sbjct:  220 KKYADFFVDLCLQEYQFQAYRPSLVAASILAASRKAL 256          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A1Z5JHV1_FISSO (Cyclin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHV1_FISSO)

HSP 1 Score: 51.2 bits (121), Expect = 2.500e-6
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI 40
            +KKY +FF NL  QDY FQ+YRPS +AAA+++ +R AL I
Sbjct:  231 LKKYAEFFCNLALQDYSFQQYRPSILAAAAVMASRVALQI 270          
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Match: A0A7S1YXT2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXT2_TRICV)

HSP 1 Score: 49.7 bits (117), Expect = 8.700e-6
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRAL 38
            +KKYV+FF NL  Q+Y FQ+Y P+H+AAA +L +R AL
Sbjct:  207 VKKYVEFFCNLTLQEYSFQQYLPTHLAAAILLASRVAL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94061.16839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LIL5_ECTSI1.750e-1587.50Cyclin D1 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A835ZBR6_9STRA9.620e-1587.50Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2LEN5_9STRA4.030e-860.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1E7FL21_9STRA3.120e-765.00Cyclin-like protein n=1 Tax=Fragilariopsis cylindr... [more]
K0RL28_THAOC1.860e-660.00Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S2FS20_9STRA2.290e-652.50Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0FMS6_9STRA2.460e-652.50Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A8K1FAI4_PYTOL2.490e-659.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1Z5JHV1_FISSO2.500e-657.50Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A7S1YXT2_TRICV8.700e-657.89Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 1..40
e-value: 1.2E-10
score: 43.5
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 3..37
e-value: 6.8E-7
score: 29.4
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 2..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94061contigH-elongata_contig94061:1894..2013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94061.16839.1mRNA_H-elongata_contig94061.16839.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94061 1894..2016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94061.16839.1 ID=prot_H-elongata_contig94061.16839.1|Name=mRNA_H-elongata_contig94061.16839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bp
MKKYVDFFANLCQQDYQFQRYRPSHIAAASILDARRALCI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004367Cyclin_C-dom
IPR036915Cyclin-like_sf