mRNA_H-elongata_contig9399.16830.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9399.16830.1
Unique NamemRNA_H-elongata_contig9399.16830.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: D7FJG8_ECTSI (UDP-galactose translocator, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG8_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 8.160e-74
Identity = 132/206 (64.08%), Postives = 157/206 (76.21%), Query Frame = 1
Query:    1 RPMLASWTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSNGSGI------VVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            RPML SWTLRGSL  AALPAA Y LQNWL Q+A+++LDSLTFNLLNQTKTLFAAL LYL+ GKKQ+  QL ALSLLL AALLLN+ S+   S        ++ +E    ARLWLGVLPV+  +++SG+ GAVTQRTLQ+SG ++SQLSLEL+ YGV TLLL S  G+GG+  V    R   F+GWT WT +PVLSQAAGG+IVGQV
Sbjct:   72 RPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLLAAALLLNSGSSGGDSKAGTGERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNSSQLSLELAVYGVLTLLLTSGSGIGGSDAVTSAGRSSAFQGWTKWTCVPVLSQAAGGLIVGQV 277          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A835YMG2_9STRA (Putative UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG2_9STRA)

HSP 1 Score: 193 bits (490), Expect = 8.130e-58
Identity = 105/196 (53.57%), Postives = 144/196 (73.47%), Query Frame = 1
Query:   16 SWTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGA-ADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            SWTL+ S+  AALPAA Y LQNWL+Q+A+++LDSLT+NLLNQTKTL AAL LY++ G++Q+ PQ+ AL++L+ AALLLN+ + S+        +GA+     LGV+PV+G S+LSG   AVTQ++LQ+ G ++  LS EL  YG+ TLL+ +    GG     G + RDG++RGWTPWT +PV +QAAGGV+VGQV
Sbjct:   57 SWTLKSSMKAAALPAALYALQNWLIQIAYMNLDSLTYNLLNQTKTLSAALCLYVVMGRRQSGPQIVALAMLVAAALLLNSRTASD-------KDGASGISWELGVVPVMGASLLSGFSAAVTQKSLQERGRNSYLLSAELGLYGIVTLLVTTLAAEGGVQVRRGGMLRDGLWRGWTPWTCLPVFTQAAGGVVVGQV 245          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A835YXE8_9STRA (Putative UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 6.060e-50
Identity = 105/196 (53.57%), Postives = 136/196 (69.39%), Query Frame = 1
Query:   13 ASWTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            A+WTLR S+  AALPAA Y LQNWL Q+ +++LDSLTFNLLNQTKTL AA+ L+LI G++Q+ PQ+ AL +L+ AALLLNA S   G       + AA     LG+LPV+G S+LSG   AVTQ++LQ+ G ++  LS EL+ YGV TLLL S      AA  G +   G++ GWT  T++PV++ A GGVIVGQV
Sbjct:   81 ATWTLRSSVKAAALPAACYALQNWLTQIGYMNLDSLTFNLLNQTKTLSAAVCLFLIMGRRQSGPQVLALMMLVAAALLLNAQSGGLG-------DAAAPISWELGILPVVGASLLSGFSAAVTQKSLQERGRNSFLLSAELAVYGVLTLLLPS------AASTGSL--QGLWEGWTIRTVIPVVTNAMGGVIVGQV 261          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: UPI0009F3639C (UDP-N-acetylglucosamine transporter ROCK1 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F3639C)

HSP 1 Score: 135 bits (339), Expect = 4.720e-35
Identity = 86/195 (44.10%), Postives = 122/195 (62.56%), Query Frame = 1
Query:   19 WTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSN-GSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            WTL GSL  + LPAA Y LQN LLQ+++ +LDSLTF++LNQTK  F A+  YLI G+KQ+  Q+ ALSLL+ AA+LL+    S  GSG     +  A   L+ G++PV+  S+LSG+  ++ Q   Q    ++  +++E+S  G   LL + +    G A    I + G F GWTPWTL+PV+  A GG++VG V
Sbjct:   78 WTLMGSLTASGLPAAVYALQNSLLQISYKNLDSLTFSILNQTKLFFTAIFTYLILGQKQSVQQVGALSLLIIAAILLSVGEGSTKGSG-----DKNADQVLFYGIVPVMVASVLSGLASSLCQWASQVKKHTSYLMTIEMSVVGSLCLLASLYKSPDGVA----IKKHGFFYGWTPWTLVPVIFNAVGGILVGLV 263          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A804NSH6_MAIZE (Uncharacterized protein n=4 Tax=Zea mays TaxID=4577 RepID=A0A804NSH6_MAIZE)

HSP 1 Score: 133 bits (335), Expect = 7.880e-35
Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 1
Query:    1 RPMLASWTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNAS-STSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            +   ++WTL GSL  + LPAA Y LQN LLQV+F +LDSLTF++LNQTK L+ +   +LI G+KQ+  Q+ AL+LL+ AA+LL+   STS GS     N G +   L  G++PV   SMLSG+  ++ Q   Q    ++  +++E+S  G   LL +++    G A    I + GVF  WT WT++PVL  A GG++VG V
Sbjct:   74 KKQFSNWTLIGSLTASGLPAAIYALQNSLLQVSFKNLDSLTFSILNQTKLLWTSFFTFLILGQKQSSKQILALALLISAAVLLSVGESTSKGS-----NGGGSDYILLYGIIPVTVASMLSGLASSLCQWASQVKKHTSYMMTIEMSFIGSVCLLASTYRSPDGEA----IRKYGVFHEWTFWTMVPVLMNAVGGILVGLV 265          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A804NSH3_MAIZE (Uncharacterized protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804NSH3_MAIZE)

HSP 1 Score: 133 bits (335), Expect = 5.130e-34
Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 1
Query:    1 RPMLASWTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNAS-STSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            +   ++WTL GSL  + LPAA Y LQN LLQV+F +LDSLTF++LNQTK L+ +   +LI G+KQ+  Q+ AL+LL+ AA+LL+   STS GS     N G +   L  G++PV   SMLSG+  ++ Q   Q    ++  +++E+S  G   LL +++    G A    I + GVF  WT WT++PVL  A GG++VG V
Sbjct:   96 KKQFSNWTLIGSLTASGLPAAIYALQNSLLQVSFKNLDSLTFSILNQTKLLWTSFFTFLILGQKQSSKQILALALLISAAVLLSVGESTSKGS-----NGGGSDYILLYGIIPVTVASMLSGLASSLCQWASQVKKHTSYMMTIEMSFIGSVCLLASTYRSPDGEA----IRKYGVFHEWTFWTMVPVLMNAVGGILVGLV 287          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A6I9S4G5_ELAGV (UDP-N-acetylglucosamine transporter ROCK1 isoform X1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9S4G5_ELAGV)

HSP 1 Score: 131 bits (330), Expect = 1.090e-33
Identity = 84/194 (43.30%), Postives = 121/194 (62.37%), Query Frame = 1
Query:   19 WTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            WTL GSL  + LPAA Y LQN LLQ+++ +LDSLTF++LNQTK  F A   YLI G+KQ+  Q+ AL++L+ AA+LL   S    SG   +  GA    L+ G++PV+  S+LSG+  ++ Q   Q    ++  +++E+S  G   LLL+++    G A    I + G F GWT WTL+P +S A GG++VG V
Sbjct:   84 WTLVGSLTASGLPAAIYALQNSLLQISYRNLDSLTFSILNQTKLFFTAFFTYLILGQKQSVKQVGALAMLIIAAILL---SVGESSGRGSSGTGADQV-LFYGIIPVMVASVLSGLASSLCQWASQVKKHTSYLMTIEMSVVGSLCLLLSTYKSPDGEA----IRKYGFFHGWTAWTLLPTISNAVGGILVGLV 269          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A199UT36_ANACO (CMP-sialic acid transporter 5 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199UT36_ANACO)

HSP 1 Score: 131 bits (330), Expect = 1.120e-33
Identity = 80/194 (41.24%), Postives = 126/194 (64.95%), Query Frame = 1
Query:   19 WTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            WT+ GSL  + LPAA Y LQN LLQ+++ +LDSLTF++LNQTK  F AL  ++I G+KQ+  Q+ AL+LL+ AA+LL+   +++G     +++   H  L+ G++PV+  S+LSG+  ++ Q   Q    ++  +++E+S +G   LL +++    G A    I + G F GWT WTL+PV+S A GG++VG V
Sbjct:   83 WTIVGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSILNQTKIFFTALFTFIILGQKQSAKQVLALALLIIAAILLSIGESTSGGXXXXSSD---HV-LFYGIIPVMVASVLSGLASSLCQWASQVKKHTSYLMTVEMSLFGSMCLLASTYQSPDGEA----IRKYGFFHGWTVWTLIPVVSNAVGGILVGLV 268          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A2K1KWZ9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KWZ9_PHYPA)

HSP 1 Score: 131 bits (330), Expect = 1.210e-33
Identity = 82/194 (42.27%), Postives = 116/194 (59.79%), Query Frame = 1
Query:   19 WTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            W+   SL  +A PAA Y LQN LLQ+++ +LDSLTF+LLNQTK +F A+ ++L+ G +QT  Q+ AL LLLGAA LL+   T+   GI    E    + LWLG++P++  S+LSG+   + Q   Q    S   ++LE+S YG   LL + W     + D   I + G F GW+  T +PV   A GG++VG V
Sbjct:   86 WSFVDSLKASASPAAIYALQNTLLQLSYRNLDSLTFSLLNQTKLVFTAVFMFLLLGSRQTKQQIGALFLLLGAATLLSLGKTAPKQGI---KEVEWESTLWLGIIPIISASVLSGLASTLCQWAAQVKRRSTYLMTLEMSTYGSLVLLTSMWW----SPDGVSIQKLGFFYGWSLLTFIPVCLNAFGGILVGLV 272          
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Match: A0A0K9PYR4_ZOSMR (CMP-sialic acid transporter 5 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PYR4_ZOSMR)

HSP 1 Score: 131 bits (330), Expect = 1.210e-33
Identity = 85/199 (42.71%), Postives = 125/199 (62.81%), Query Frame = 1
Query:    7 MLASWTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLFAALSLYLITGKKQTPPQLAALSLLLGAALLLN-ASSTSNGSGIVVANEGAAHARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVATLLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV 600
            ++  WTL G+L  + LPAA Y LQN LLQ+++ +LDSLTF++LNQTK LF ALS+YLI G KQ+P QL AL+LL+ AA+LL+   S+  GS     N+   +     G++PVL  S+LSG+  ++ Q   Q    ++  +++E+S  G   LL+++      + D   I ++G F GWT  TL+PV   A GG++VG V
Sbjct:   82 LIKEWTLVGALTASGLPAAIYALQNSLLQISYKNLDSLTFSILNQTKLLFTALSVYLILGNKQSPKQLGALALLICAAILLSIGESSGRGSSGDDPNQTFIY-----GIIPVLVASVLSGLASSLCQWASQVKKHASYLMTIEMSIVGCLCLLIST----SKSPDGEAIRKNGFFYGWTALTLIPVFMNAIGGILVGLV 271          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9399.16830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJG8_ECTSI8.160e-7464.08UDP-galactose translocator, putative n=2 Tax=Ectoc... [more]
A0A835YMG2_9STRA8.130e-5853.57Putative UDP-galactose translocator n=1 Tax=Tribon... [more]
A0A835YXE8_9STRA6.060e-5053.57Putative UDP-galactose translocator n=1 Tax=Tribon... [more]
UPI0009F3639C4.720e-3544.10UDP-N-acetylglucosamine transporter ROCK1 n=1 Tax=... [more]
A0A804NSH6_MAIZE7.880e-3543.28Uncharacterized protein n=4 Tax=Zea mays TaxID=457... [more]
A0A804NSH3_MAIZE5.130e-3443.28Uncharacterized protein n=1 Tax=Zea mays TaxID=457... [more]
A0A6I9S4G5_ELAGV1.090e-3343.30UDP-N-acetylglucosamine transporter ROCK1 isoform ... [more]
A0A199UT36_ANACO1.120e-3341.24CMP-sialic acid transporter 5 n=2 Tax=Ananas comos... [more]
A0A2K1KWZ9_PHYPA1.210e-3342.27Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A0K9PYR4_ZOSMR1.210e-3342.71CMP-sialic acid transporter 5 n=1 Tax=Zostera mari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9399contigH-elongata_contig9399:356..955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.8
Seed ortholog evalue6.9e-59
Seed eggNOG ortholog2880.D7FJG8
KEGG koko:K15272
KEGG TC2.A.7.12
GOsGO:0003674,GO:0005215,GO:0005338,GO:0005342,GO:0005463,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006810,GO:0006811,GO:0006820,GO:0007275,GO:0008150,GO:0008509,GO:0008514,GO:0009555,GO:0009653,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010208,GO:0010584,GO:0010605,GO:0010927,GO:0012505,GO:0015075,GO:0015136,GO:0015165,GO:0015318,GO:0015711,GO:0015739,GO:0015780,GO:0015789,GO:0015849,GO:0015931,GO:0015932,GO:0016043,GO:0019222,GO:0022607,GO:0022857,GO:0030162,GO:0030198,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032989,GO:0034220,GO:0042176,GO:0042177,GO:0043062,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0045861,GO:0046942,GO:0046943,GO:0048229,GO:0048509,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051341,GO:0051354,GO:0055085,GO:0060255,GO:0061136,GO:0065007,GO:0065009,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0085029,GO:0090481,GO:0098656,GO:1901264,GO:1901505,GO:1901799,GO:1902183,GO:1903050,GO:1903051,GO:1903069,GO:1903070,GO:1903362,GO:1903363,GO:1903573,GO:1903825,GO:1903856,GO:1903857,GO:1904292,GO:1904293,GO:1905039,GO:1905897,GO:1990569,GO:2000058,GO:2000059
EggNOG free text desc.pyrimidine nucleotide-sugar transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG2234@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionNucleotide-sugar transporter
Ec32 orthologEc-14_006310.1
Exons1
Model size600
Cds size594
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931336.0491066-CDS-H-elongata_contig9399:355..9491622931336.0491066-CDS-H-elongata_contig9399:355..949Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9399 356..949 -
1691679794.8851242-CDS-H-elongata_contig9399:355..9491691679794.8851242-CDS-H-elongata_contig9399:355..949Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9399 356..949 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931336.073707-UTR-H-elongata_contig9399:949..9551622931336.073707-UTR-H-elongata_contig9399:949..955Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9399 950..955 -
1691679794.8968077-UTR-H-elongata_contig9399:949..9551691679794.8968077-UTR-H-elongata_contig9399:949..955Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9399 950..955 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9399.16830.1prot_H-elongata_contig9399.16830.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9399 356..949 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9399.16830.1

>prot_H-elongata_contig9399.16830.1 ID=prot_H-elongata_contig9399.16830.1|Name=mRNA_H-elongata_contig9399.16830.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MLASWTLRGSLATAALPAAAYTLQNWLLQVAFVHLDSLTFNLLNQTKTLF
AALSLYLITGKKQTPPQLAALSLLLGAALLLNASSTSNGSGIVVANEGAA
HARLWLGVLPVLGGSMLSGMCGAVTQRTLQQSGCSASQLSLELSAYGVAT
LLLASWLGLGGAADVGKIWRDGVFRGWTPWTLMPVLSQAAGGVIVGQV
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mRNA from alignment at H-elongata_contig9399:356..955-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9399.16830.1 ID=mRNA_H-elongata_contig9399.16830.1|Name=mRNA_H-elongata_contig9399.16830.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=600bp|location=Sequence derived from alignment at H-elongata_contig9399:356..955- (Himanthalia elongata Himel1 dioecious)
AGACCCATGCTTGCGTCCTGGACCCTTCGAGGCAGCCTGGCGACGGCGGC GCTTCCAGCCGCGGCGTATACTCTTCAAAACTGGCTGTTACAGGTGGCGT TCGTGCACCTGGACTCGCTGACATTCAACCTCCTCAACCAAACCAAGACC CTCTTCGCGGCGCTCTCCTTGTACCTCATCACCGGCAAGAAGCAGACGCC CCCGCAGCTGGCGGCGCTCTCTCTGTTGCTTGGTGCCGCTCTCCTCCTCA ACGCAAGTTCCACGAGCAACGGAAGCGGGATTGTCGTGGCGAACGAGGGA GCAGCGCACGCGCGACTCTGGCTCGGAGTGTTACCGGTCTTGGGCGGGTC GATGCTGTCAGGGATGTGTGGGGCGGTCACCCAGCGGACGCTGCAGCAGA GCGGCTGCAGCGCCTCCCAGCTGTCGCTCGAGCTCTCGGCGTACGGAGTG GCGACTCTCTTGCTCGCGTCGTGGCTCGGATTGGGCGGGGCAGCGGACGT AGGGAAAATATGGAGAGATGGGGTGTTCCGAGGATGGACTCCTTGGACCC TGATGCCGGTGCTGAGTCAGGCGGCAGGCGGAGTGATCGTCGGCCAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig9399:356..955-

>mRNA_H-elongata_contig9399.16830.1 ID=mRNA_H-elongata_contig9399.16830.1|Name=mRNA_H-elongata_contig9399.16830.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig9399:356..955- (Himanthalia elongata Himel1 dioecious)
ATGCTTGCGTCCTGGACCCTTCGAGGCAGCCTGGCGACGGCGGCGCTTCC
AGCCGCGGCGTATACTCTTCAAAACTGGCTGTTACAGGTGGCGTTCGTGC
ACCTGGACTCGCTGACATTCAACCTCCTCAACCAAACCAAGACCCTCTTC
GCGGCGCTCTCCTTGTACCTCATCACCGGCAAGAAGCAGACGCCCCCGCA
GCTGGCGGCGCTCTCTCTGTTGCTTGGTGCCGCTCTCCTCCTCAACGCAA
GTTCCACGAGCAACGGAAGCGGGATTGTCGTGGCGAACGAGGGAGCAGCG
CACGCGCGACTCTGGCTCGGAGTGTTACCGGTCTTGGGCGGGTCGATGCT
GTCAGGGATGTGTGGGGCGGTCACCCAGCGGACGCTGCAGCAGAGCGGCT
GCAGCGCCTCCCAGCTGTCGCTCGAGCTCTCGGCGTACGGAGTGGCGACT
CTCTTGCTCGCGTCGTGGCTCGGATTGGGCGGGGCAGCGGACGTAGGGAA
AATATGGAGAGATGGGGTGTTCCGAGGATGGACTCCTTGGACCCTGATGC
CGGTGCTGAGTCAGGCGGCAGGCGGAGTGATCGTCGGCCAGGTGATGCTT
GCGTCCTGGACCCTTCGAGGCAGCCTGGCGACGGCGGCGCTTCCAGCCGC
GGCGTATACTCTTCAAAACTGGCTGTTACAGGTGGCGTTCGTGCACCTGG
ACTCGCTGACATTCAACCTCCTCAACCAAACCAAGACCCTCTTCGCGGCG
CTCTCCTTGTACCTCATCACCGGCAAGAAGCAGACGCCCCCGCAGCTGGC
GGCGCTCTCTCTGTTGCTTGGTGCCGCTCTCCTCCTCAACGCAAGTTCCA
CGAGCAACGGAAGCGGGATTGTCGTGGCGAACGAGGGAGCAGCGCACGCG
CGACTCTGGCTCGGAGTGTTACCGGTCTTGGGCGGGTCGATGCTGTCAGG
GATGTGTGGGGCGGTCACCCAGCGGACGCTGCAGCAGAGCGGCTGCAGCG
CCTCCCAGCTGTCGCTCGAGCTCTCGGCGTACGGAGTGGCGACTCTCTTG
CTCGCGTCGTGGCTCGGATTGGGCGGGGCAGCGGACGTAGGGAAAATATG
GAGAGATGGGGTGTTCCGAGGATGGACTCCTTGGACCCTGATGCCGGTGC
TGAGTCAGGCGGCAGGCGGAGTGATCGTCGGCCAGGTG
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