prot_H-elongata_contig122026.1682.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig122026.1682.1
Unique Name	prot_H-elongata_contig122026.1682.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	179

Homology

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 5.690e-102
Identity = 155/178 (87.08%), Postives = 175/178 (98.31%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +GTPEYA+ILAFDVKIDSDAR+HA+E+GVRIFTADIIYHLFDQFTA+MDRLMEQRRQDA+NLAVFPCIVKIMK HVFNMKDPIIVGMEV+EG+LRVGTPLCIP +GG+EIGRVTSIEQNHREVDK+ KG+SGAVR+DDAHGGSTLTYGRQFSA+SG+L+SSITRETINALKAHF++Q+
Sbjct:  878 KGTPEYATILAFDVKIDSDARRHADENGVRIFTADIIYHLFDQFTAHMDRLMEQRRQDAKNLAVFPCIVKIMKEHVFNMKDPIIVGMEVIEGNLRVGTPLCIPAMGGMEIGRVTSIEQNHREVDKMGKGASGAVRVDDAHGGSTLTYGRQFSADSGSLYSSITRETINALKAHFREQL 1055

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.060e-80
Identity = 132/178 (74.16%), Postives = 154/178 (86.52%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G PEYA+ILAFDV+ID+DAR +AEE GVRIFTADIIYHLFDQFTA+M  LMEQRR DA+  AVFPCI KIM  HVFN KDPIIVGMEV+EG+LRVGTPLCIP L GL IGRV SIE NHR+V K++KG SGAVRI+DA+GGSTLTYGRQF A SG+L+S I+R +I+ALKA+F+ +V
Sbjct:  825 KGKPEYATILAFDVRIDADARAYAEEVGVRIFTADIIYHLFDQFTAFMANLMEQRRTDAQATAVFPCICKIMPQHVFNKKDPIIVGMEVIEGTLRVGTPLCIPALEGLPIGRVASIEDNHRQVQKLAKGGSGAVRIEDANGGSTLTYGRQFDATSGSLYSMISRPSIDALKANFRAEV 1002

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A7S0CGW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGW3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.990e-66
Identity = 107/178 (60.11%), Postives = 139/178 (78.09%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G  EYA+ILAFDVK++ DAR HA E GVRIFTADIIYHLFDQFT +M+ L E RR++A  +AVFP I +I+  H+FN KDPIIVG+EV EG L++GTPLCIP L GL IG+VTSIE N ++ D   KG+S AV+I++ H   TLTYGRQF + + +L+S +TR +I+ALK +FKD++
Sbjct:  177 RGVSEYATILAFDVKVEPDARDHAREMGVRIFTADIIYHLFDQFTRFMEELSETRREEAAAIAVFPSICRILPQHIFNQKDPIIVGIEVAEGILKIGTPLCIPALEGLYIGKVTSIEMNGKQQDTARKGASVAVKIENEHN-PTLTYGRQFDS-TNSLYSQVTRASIDALKTNFKDKL 352

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A7R9ZL82_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZL82_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.260e-65
Identity = 104/171 (60.82%), Postives = 136/171 (79.53%), Query Frame = 0

Query:    7 YASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKD 177
            YA+ILAFDV I+ +AR+HA + GVRI TADIIYHLFDQFT +MD L ++RR++A  +AVFP I+KI+  HVFN KDPIIVG+EV+EG L+VGTPLC+P LGGL +G+VTSIE + RE D   KGSS A++I +  G   +TYGRQF A + +L+S++TR +I+ALK +FKD
Sbjct:    1 YATILAFDVDIEREAREHATDMGVRIMTADIIYHLFDQFTRFMDDLTQRRREEAAAVAVFPSIIKILPQHVFNQKDPIIVGVEVVEGILKVGTPLCVPALGGLHVGKVTSIENSGREQDTAKKGSSVAIKIVN-EGNPNITYGRQFDA-AHSLYSTLTRASIDALKENFKD 169

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A7S1D5X2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5X2_CYCTE)

HSP 1 Score: 211 bits (538), Expect = 1.660e-64
Identity = 104/178 (58.43%), Postives = 139/178 (78.09%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G PE+A+ILAFDV+++ +AR HA+E  VRIFTADIIYHLFDQFT +M+ L E+RR +A  +AVFP I KI+  H+FN KDPIIVG+EV+EG L+VGTPLC+P LGGL +G+VTSIE N RE     KGSS A++I +      LTYGRQF A + +L+S+++R +I+ALK +FKD++
Sbjct:  187 KGAPEFATILAFDVEVEKEARDHAQEMSVRIFTADIIYHLFDQFTRFMEELTERRRAEAAEIAVFPSICKILPQHIFNQKDPIIVGVEVVEGILKVGTPLCVPALGGLHVGKVTSIESNGREQQTARKGSSVAIKIVN-ESNPNLTYGRQFDA-THSLYSTLSRASIDALKENFKDKL 362

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: B7GD73_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD73_PHATC)

HSP 1 Score: 217 bits (552), Expect = 2.100e-64
Identity = 106/178 (59.55%), Postives = 143/178 (80.34%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G PE+A+ILAFDV I+ +AR+HAE+ GVRI TADIIYHLFDQFT +MD L +++R++A  +AVFP I++++  HVFN KDPIIVG+E++EG L+VGTPLC+P LGGL IG+VTSIE N RE +   KG S A++I +     T+TYGRQF + S +L+SS+TR +I+ALKAHFK+Q+
Sbjct:  406 KGHPEFATILAFDVDIEREAREHAEDMGVRIMTADIIYHLFDQFTRFMDELNQRKREEATAVAVFPSIIRVLPQHVFNQKDPIIVGVEIVEGILKVGTPLCVPALGGLHIGKVTSIEMNGREQETARKGLSVAIKIVN-ESNPTITYGRQFDS-SHSLYSSLTRASIDALKAHFKEQL 581

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: B8BV18_THAPS (Tr-type G domain-containing protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BV18_THAPS)

HSP 1 Score: 216 bits (551), Expect = 2.530e-64
Identity = 108/178 (60.67%), Postives = 141/178 (79.21%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G PEYA+ILAFDV ++ +AR+ AEE  VRIFTADIIYHLFDQFT +M++L E+RR+DA  +AVFP I+KI+  HVFN KDPIIVG+EV+EG L+VGTPLC+P LGGL +G VTSIE N RE +   KGSS A++I +     T+TYGRQF A S +L+S ++R +I+ALK HFK+++
Sbjct:  398 KGCPEYATILAFDVPVEREAREQAEEVNVRIFTADIIYHLFDQFTRFMEQLTEKRREDAAAIAVFPSIIKILPQHVFNQKDPIIVGVEVVEGILKVGTPLCVPALGGLTVGTVTSIESNGREQETAKKGSSVAIKIVN-ESNPTITYGRQFDA-SHSLYSHLSRASIDALKLHFKEKL 573

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A7R9WHP7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WHP7_9STRA)

HSP 1 Score: 219 bits (557), Expect = 7.010e-64
Identity = 107/178 (60.11%), Postives = 143/178 (80.34%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G  EYA+ILAFDV ++ +AR+HA E  VRIFTADIIYHLFDQFT +M+ L E+RRQDA ++AVFP I+KI+  HVFN KDPIIVG+EV+EG L+VGTPLC+P +GGL +G+VTSIE N RE +   KG+S AV+I +     T+TYGRQF + + +L+S++TR++I+ALK HFKD++
Sbjct:  588 KGCGEYATILAFDVPVEREAREHANEMSVRIFTADIIYHLFDQFTRFMEELTERRRQDAADVAVFPSIIKILPQHVFNQKDPIIVGVEVVEGILKVGTPLCVPAIGGLHVGKVTSIESNGREQETAKKGASVAVKIVN-ESNPTITYGRQFDS-THSLYSTLTRQSIDALKEHFKDKL 763

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A7S2Y322_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y322_9STRA)

HSP 1 Score: 221 bits (563), Expect = 7.130e-64
Identity = 110/178 (61.80%), Postives = 141/178 (79.21%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G PE+A++LAFDV +  +AR+HA E GVRI TADIIYHLFDQFT +MD L ++RR++A  +AVFP IVKI+  H+FN KDPIIVGME++EG L+VGTPLC+P LGGL +G+V SIE N RE +   KG+S AV+I +     TLTYGRQF A S  L+S++TRE+I+ALKAHFKDQ+
Sbjct:  805 KGRPEFATVLAFDVDVSKEAREHATEMGVRIMTADIIYHLFDQFTRFMDELNQRRREEAAAVAVFPSIVKILPQHIFNQKDPIIVGMEIVEGILKVGTPLCVPALGGLFVGKVDSIESNGREQETARKGNSVAVKIVN-ESNPTLTYGRQFDA-SNMLYSTLTRESIDALKAHFKDQL 980

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BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Match: A0A7S4K8F1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K8F1_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.260e-63
Identity = 110/178 (61.80%), Postives = 144/178 (80.90%), Query Frame = 0

Query:    2 QGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMDRLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTPLCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGRQFSAESGNLFSSITRETINALKAHFKDQV 179
            +G  E+A+ILAFDV ++ +AR+HA E GVRIFTADIIYHLFDQFT +M+ L E+RRQDA ++AVFP IVKI+  HVFN KDPIIVG+EV+EG L+VGTPLC+P LGGL IG+VTSIE N RE +   KGSS A++I +     T+TYGRQF + + +L+S++TR++I+ALK HFKD++
Sbjct:  745 KGCSEFATILAFDVPVEKEAREHATEMGVRIFTADIIYHLFDQFTRFMEELTERRRQDAADVAVFPSIVKILPQHVFNQKDPIIVGVEVVEGILKVGTPLCVPVLGGLHIGKVTSIECNSREQETARKGSSVAIKIVN-ESNPTITYGRQFDS-THSLYSTLTRQSIDALKEHFKDKL 920

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot

BLAST of mRNA_H-elongata_contig122026.1682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L4N8_9PHAE	5.690e-102	87.08	Tr-type G domain-containing protein n=2 Tax=Ectoca...	[more]
A0A836CHS5_9STRA	1.060e-80	74.16	Tr-type G domain-containing protein n=1 Tax=Tribon...	[more]
A0A7S0CGW3_9STRA	1.990e-66	60.11	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A7R9ZL82_9STRA	1.260e-65	60.82	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]
A0A7S1D5X2_CYCTE	1.660e-64	58.43	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
B7GD73_PHATC	2.100e-64	59.55	Predicted protein (Fragment) n=2 Tax=Phaeodactylum...	[more]
B8BV18_THAPS	2.530e-64	60.67	Tr-type G domain-containing protein n=2 Tax=Thalas...	[more]
A0A7R9WHP7_9STRA	7.010e-64	60.11	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S2Y322_9STRA	7.130e-64	61.80	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A7S4K8F1_9STRA	1.260e-63	61.80	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023115	Translation initiation factor IF- 2, domain 3	PFAM	PF11987	IF-2	coord: 8..45 e-value: 2.2E-9 score: 37.4
None	No IPR available	GENE3D	2.40.30.10		coord: 65..179 e-value: 6.9E-35 score: 121.9
None	No IPR available	PANTHER	PTHR43381:SF4	EUKARYOTIC TRANSLATION INITIATION FACTOR 5B	coord: 4..178
IPR036925	Translation initiation factor IF-2, domain 3 superfamily	GENE3D	3.40.50.10050		coord: 1..57 e-value: 3.7E-19 score: 71.3
IPR036925	Translation initiation factor IF-2, domain 3 superfamily	SUPERFAMILY	52156	Initiation factor IF2/eIF5b, domain 3	coord: 4..58
IPR015760	Translation initiation factor IF- 2	PANTHER	PTHR43381	FAMILY NOT NAMED	coord: 4..178
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 64..177

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig122026	contig	H-elongata_contig122026:111..1502 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig122026.1682.1	mRNA_H-elongata_contig122026.1682.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig122026 111..1502 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig122026.1682.1 ID=prot_H-elongata_contig122026.1682.1|Name=mRNA_H-elongata_contig122026.1682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp
MQGTPEYASILAFDVKIDSDARKHAEESGVRIFTADIIYHLFDQFTAYMD
RLMEQRRQDARNLAVFPCIVKIMKAHVFNMKDPIIVGMEVLEGSLRVGTP
LCIPGLGGLEIGRVTSIEQNHREVDKISKGSSGAVRIDDAHGGSTLTYGR
QFSAESGNLFSSITRETINALKAHFKDQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023115	TIF_IF2_dom3
IPR036925	TIF_IF2_dom3_sf
IPR015760	TIF_IF2
IPR009000	Transl_B-barrel_sf