prot_H-elongata_contig93850.16820.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93850.16820.1
Unique Nameprot_H-elongata_contig93850.16820.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
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BLAST of mRNA_H-elongata_contig93850.16820.1 vs. uniprot
Match: A0A6H5KV09_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV09_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.630e-25
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 0 
Query:    3 FHILVNATNCSLPETDGFDGLGSQGVDLLGGPLSLAETGSWKAFVLPLKEDVWVSEGDYRVLFCADTGMFNLNYQRFFTPNPT 85
            F ILVNATNCS   TDG +GLG  GVDLL GPL    TGSW+AF +  KE+V+V EG +RVLFCAD G+FN+N+ R +TP PT
Sbjct:  561 FRILVNATNCSSAATDGLNGLGDTGVDLLNGPLFAGYTGSWEAFEMVYKEEVYVPEGTHRVLFCADDGIFNMNFLRVWTPTPT 643
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93850.16820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KV09_9PHAE2.630e-2562.65GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93850contigH-elongata_contig93850:224..839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93850.16820.1mRNA_H-elongata_contig93850.16820.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93850 48..931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93850.16820.1 ID=prot_H-elongata_contig93850.16820.1|Name=mRNA_H-elongata_contig93850.16820.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
MVFHILVNATNCSLPETDGFDGLGSQGVDLLGGPLSLAETGSWKAFVLPL
KEDVWVSEGDYRVLFCADTGMFNLNYQRFFTPNPTPAPAMAWIYMALELF
VSPVGSNLGIGSLDVATAIASKALRACADEDVLEAGS*
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