mRNA_H-elongata_contig938.16816.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig938.16816.1
Unique NamemRNA_H-elongata_contig938.16816.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.740e-83
Identity = 165/271 (60.89%), Postives = 175/271 (64.58%), Query Frame = 1
Query:    4 VCITSDGWTSCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAVVKHGLTGKVTAVTTDCEPSMVKMGRLLE-EGDVCTHIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTCEEAVK 813
            VCITSDGWTSCANDTYMSL  TLITS WKLVT SV+CSKSEGTTTGDAL+A IKA V KHGLTGKVTAVTTDCEPSMVKMGRLL  +  V T IGCCN+RLEST+S+VFNGPRVKKVM LARGLVT Y TSSQAAD LK FVK Y G  NKRVIQDV                                                                VTGS VVPFI+DL NSLEDAIDDL ELPP  DA VNTA  AVM C +A++
Sbjct:   41 VCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV----------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALR 247          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.220e-79
Identity = 184/474 (38.82%), Postives = 236/474 (49.79%), Query Frame = 1
Query:    1 HVCITSDGWTSCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAVVKHGLTGKVTAVTTDCEPSMVKMGRLLEEGDV-CTHIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPP-SLDAEVNTARVAVMTCEEAV-----------KIAVENRKEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMA--------------------AAQAVGDAPTQQLGKG----------------------------TDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESE 1239
            +V IT+DGWTS +N++YMSL V  I   W+L   S+NC+K  G+T G+ L+ +I + + +HGLTG+VTA  TDCEPSMVK GRLLE G     HIGC NHR+ESTTS VFNG  +   +A AR +V  Y  SSQ +  L  F+ I        V+QDV TRWWS+ +M+ RLL L  AI  HE+ DN+ P+LS  DW +L LI PIL PF   Q  LEG KYVTGS  VP I +L N LE AI DL       + A    A  AV+   EA+              +E R+ ++ Q                                       A                    AAQ VG  P    G+G                            T       + +   +E+ +FQT+ G+ I+    +G K+Y DPLDWWR R  +FPHLA LARRVLAIP++QA SE
Sbjct:   76 YVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSE 547          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 1.750e-76
Identity = 191/514 (37.16%), Postives = 249/514 (48.44%), Query Frame = 1
Query:    4 VCITSDGWTSCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAVVKHGLTGKVTAVTTDCEPSMVKMGRLLE-EGDVCTHIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPS-LDAEVNTARVAVMTCEEAVKIAVENR----------KEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAA------------AQAVGDAPTQQ--------LGKGTDSSTT------------------------------SLITNSARVELKAFQTSIGVKIYELDNEGT---KMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE 1350
            V IT+DGWTS  N++YMSL V  I   WKL   S++C+K  GTTTG+ L+A +   V +H LTG+V A  TDCEPSM+K GRLLE +G   +HIGC NHR+ESTTS VFNG R    + LAR LV  Y  SSQ A  L     I        V+QDV TRWWST +MV RLL L  AI  HE+ D + PLLS  DW +L LI PIL PF   Q  LEG +YVTGS  +  + +L   LE AI DL  +    L      A  AV    EA+     NR          +E K +                                       AA            A A  + P           LG G  +S                                  +     +E+ AF+ + G++++++    T   K++ +PLD WR +  ++P LA LARRVLAIP++QA+SE +FS AG  +T  R+ L    V+LLV LR+ W +V+E
Sbjct:   41 VAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNG-RSLGALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDE 552          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 2.500e-70
Identity = 212/541 (39.19%), Postives = 283/541 (52.31%), Query Frame = 1
Query:    1 HVCITSDGWTSCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAVVKHGLTGKVTAVTTDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTC-----------------------------------------------------------------EEAVKIAVENRKEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFM---------AAAQAVGDAPT-----------------------QQLGKGTDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHS 1332
            HV +TSDGWT  +NDTYMS   T I+S + LV   + C K    T G+ L   +KA + ++GLTG+  A+TTDCE SMVK GRLLEE +  TH+GC  HRLES TS  F GP V K +ALARG+VT Y+ SSQA+D L+    I      K V+QDV TRWWST   + RL+ L+  I +HE  D+  PLL   DW +L+L+  +L+PF   Q  LE  K VT   V P+I DL + L++A++ L       ++ V  A+  V+ C                                                                  EAVK+A+E +  E   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           A++  +   P                        QQ    + S     + +    E+ AF+ + G+ +   + +G ++   PL+WWRV+  ++P LA+LARRVL IPA QA+SE +FS AG ++TK R  + P  V L+V LR++
Sbjct:    5 HVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIV-QVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAV-SWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.740e-69
Identity = 161/452 (35.62%), Postives = 229/452 (50.66%), Query Frame = 1
Query:    1 HVCITSDGWTSCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAVVKHGLTGKVTAVTTDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTCEEAVK---IAVENRKEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQAVGDAPTQQLGKGTDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVE 1347
            HV +TSDGWTS +NDTYM    T I+S + LV   V C K  G TTG+ L   +KA + ++GLT +  A TTDCEPSMVK GRLLEE +  TH+GC  HRLES TS  F GP V K +ALAR +VT Y+ SSQA+D L+    I      K+V+QDV TRWWST + + RLL L+  I +HE  D++ PLL   DW +L+++ P+ +PF  +Q   E  K VT S V+P+I DL + L++A++ L       ++ V  A+  V    + V+   + VE R  +K Q                                        A +A     TQ  G            +S+ + ++             D         P D  +       + ++   RVL IPA+Q +SE +FS AG ++TK R  + P  V+L++ LR+  + V+
Sbjct:   49 HVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIV-QVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVK-----VAIEAKATEDTQSAGA-----------SSSLIPVEPAAXXXXXXXXXXDFAAASAV--PGDKQQSA-----NASSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVD 476          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.790e-60
Identity = 153/234 (65.38%), Postives = 169/234 (72.22%), Query Frame = 1
Query:  649 EGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTCEEAVKIAVENRKEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQAVGDAPTQQLGKGTDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE 1350
            EGR+   G F    +      L  A+D   ++   +D E   A V  +  EEAVKIAVE R  E  Q        XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AQAVG A T QL +G DSS   LIT+S RVEL AF+ S G+K+YE D EG K+Y+DPLDWWRVRC DFPHLANLARRVLAIPATQAESE LFSCAGNI+TKNRNNLAPTTV+LLVLLRHSWKIVEE
Sbjct:   66 EGRRRQPGGFKPVQV------LATALDPRTKILYGVD-EDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEE 292          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 9.720e-51
Identity = 109/267 (40.82%), Postives = 152/267 (56.93%), Query Frame = 1
Query:   31 SCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAVVKHGLTGKVTAVTTDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTCEEAVKIAVENR 831
            S +NDTYM+   T I+S + LV   +   K  G TTG+ L   +KA + ++GLTG+  A TTDCEP MVK GRLLEE +  +H+GC  HR ES TS  F GP V K +AL RG+VT Y+ SSQA++ L+    I      K+V+QDV TRWWST   +                D++ PLL+  DW +L+L+ P+L PF   Q  LE  K VT S V  +I DL + L++AI+ L       ++ V  A+  ++ C  A++  +  R
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIV-QVERKKVVQDVETRWWSTPREI----------------DSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRR 252          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU)

HSP 1 Score: 124 bits (312), Expect = 2.630e-27
Identity = 124/464 (26.72%), Postives = 186/464 (40.09%), Query Frame = 1
Query:    4 VCITSDGWTSCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAVVKHGL-TGKVTAVTTDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADNLDPL------LSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPP--SLDAEVNTARVAVMTCEEAVK---------IAVENRKEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQAVGDAPTQQLGKGTDSSTTSLITNSARVELKAFQTSIGVKIYELDNEGTKMYID-PLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWK 1338
            + +T+D WTS A + Y+ +    I+  W+L +F +     E   TG  ++A I+ A+ +  +    + AV  D   ++V    +L+E      + C  H L+   S     P++ K +  AR LV  +  S  A+  LK   K   G   K++IQDV+TRW ST  MV RLLE +  +    +   + P       L    W +LE +   L+ F      L G  YVT S + P +  L  S +       E  P  +  A  +    A  + E  VK          A  + +  K +                                      +   +   +     L  G DSST S   +S   E  A   +I  ++     E      + PL WW+     +P LA+LAR  L IPAT   SE LFS AGNI +K R +L P  V +L  L  + K
Sbjct:   82 IALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILKEKRGWNSVCCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQK-QMGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQTTY----ETAPVQAFQAAASQETTACWSREVTVKDDSPDTQIIAAALDPRFRKLKFLTPEERFSVQSKVQSLASQSMQEETAKKQCATENEESITCFKRTSNGSLDSLF-GCDSSTDS---DSETAEQYAQNQAITNEVLMYFGEHPLSKTENPLSWWKSNEAKYPSLASLARSFLCIPATSTPSERLFSAAGNITSKKRASLIPEHVDMLTFLHCNLK 536          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.700e-27
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 1
Query: 1168 TDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE 1350
            TDFPHLANLARRVLAIPATQA+SE LFSCAGNI+TKNRNNLAPTTV+LLVLLRHSWKIVEE
Sbjct:  152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEE 212          
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Match: UPI001E1DF359 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF359)

HSP 1 Score: 122 bits (305), Expect = 1.870e-26
Identity = 132/491 (26.88%), Postives = 207/491 (42.16%), Query Frame = 1
Query:    4 VCITSDGWTSCANDTYMSLMVTLITSTWKLVTFSVNCSKSEGTTTGDALSADIKAAV----VKHGLTGKVTAVTTDCEPSMVKMGRLLEEGDVCT-HIGCCNHRLESTTSVVFNGPRVKKVMALARGLVT*YSTSSQAADSLK*FVKIYFGF*NKRVIQDVATRWWSTCSMVARLLELKVAI-------DKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLLEGRKYVTGSFVVPFIFDLGNSL----EDAIDDLNELPPSLDAEVNTARVAVMTCEEAVKIAVENR-KEEKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQA----VGDAPTQQLGKGTDS----------------STTSLITNS-------ARVEL-KAFQTSIGVKIYELDNEGTKMYID-PLDWWRVRCTDFPHLANLARRVLAIPATQAESECLFSCAGNIITKNRNNLAPTTVKLLVLLRHSWK 1338
            V IT+DGWTS A ++Y+++ VT I   WKLV F +       + T + ++  I+ AV    +  GL G V  V +D   +M+K G++L     CT HIGC  H L            V +++A  R +V+ +  S  A   LK   ++  G  N ++  DV TRW S   M+ R LEL+ A+       +     D     +S  + T+ + +  +L+P +   T+L      T S ++P  F L N +    ED +  + E+   + A++ T R    T    +  A++ R K+  Y                                       M  A      +   PT  L   +D                 +T   + N        ARVE  K+ Q    +++ +  +E      D PL WW+ R   FP L+ LA+ +L IPAT   SE +FS AG+I+T  R +L    V  L+ L+ +WK
Sbjct:   30 VAITTDGWTSRATESYVTITVTFINVDWKLVNFVLQTRPLPESHTAENIAEVIEYAVKEWKLPTGLGGTVPPVISDNAANMIKAGKVLG----CTIHIGCLAHTLNLAVQKALKVKSVSQLLARVRSIVSFFHRSCVATAVLKSKAQL-LGLPNHKLKTDVCTRWNSAFEMLNRFLELQAAVVATLTSKEMMHMKDKTLHSISDQNLTLAQEVSVMLKPVKEITTMLCTESLPTVSVIMPLHFKLTNKILQPNEDDLHAIVEMKQIMRADL-TQRYLDKTELLNMTSAIDPRFKQLPYLSDDDRFAVYNHLTEEAIRVSAVVPAVVKVKTKKSEPVTMTKATVSQPPLPSLPTDMLEDQSDEIVCDTAPAIKQESQIVATPKSVLNDILGEVFIARVEAPKSSQELAQMEVIQYKSEPPVSLNDNPLQWWKQRELRFPFLSKLAKCLLCIPATSVPSERVFSTAGDILTAQRASLKAKHVDKLIFLKKNWK 514          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig938.16816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE1.740e-8360.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE1.220e-7938.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI1.750e-7637.16Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE2.500e-7039.19Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE1.740e-6935.62Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JWI1_9PHAE2.790e-6065.38Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE9.720e-5140.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A671UN90_SPAAU2.630e-2726.72Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sp... [more]
A0A6H5JPB0_9PHAE2.700e-2793.44Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
UPI001E1DF3591.870e-2626.88E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig938contigH-elongata_contig938:12868..14412 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.9
Seed ortholog evalue7.7e-27
Seed eggNOG ortholog2880.D7G5Z0
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1350
Cds size852
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig938.16816.1prot_H-elongata_contig938.16816.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig938 13366..14412 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931334.417793-UTR-H-elongata_contig938:12867..133651622931334.417793-UTR-H-elongata_contig938:12867..13365Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig938 12868..13365 +
1691679794.3335297-UTR-H-elongata_contig938:12867..133651691679794.3335297-UTR-H-elongata_contig938:12867..13365Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig938 12868..13365 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931334.4350984-CDS-H-elongata_contig938:13365..136651622931334.4350984-CDS-H-elongata_contig938:13365..13665Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig938 13366..13665 +
1691679794.3460753-CDS-H-elongata_contig938:13365..136651691679794.3460753-CDS-H-elongata_contig938:13365..13665Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig938 13366..13665 +
1622931334.4596632-CDS-H-elongata_contig938:13860..144121622931334.4596632-CDS-H-elongata_contig938:13860..14412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig938 13861..14412 +
1691679794.353911-CDS-H-elongata_contig938:13860..144121691679794.353911-CDS-H-elongata_contig938:13860..14412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig938 13861..14412 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig938.16816.1

>prot_H-elongata_contig938.16816.1 ID=prot_H-elongata_contig938.16816.1|Name=mRNA_H-elongata_contig938.16816.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=284bp
MVARLLELKVAIDKHEAADNLDPLLSAADWTILELILPILEPFRHTQTLL
EGRKYVTGSFVVPFIFDLGNSLEDAIDDLNELPPSLDAEVNTARVAVMTC
EEAVKIAVENRKEEKYQAASSQQRPEAVAATASSTSSAGEEDTSRKRRCR
GGGGFMAAAQAVGDAPTQQLGKGTDSSTTSLITNSARVELKAFQTSIGVK
IYELDNEGTKMYIDPLDWWRVRCTDFPHLANLARRVLAIPATQAESECLF
SCAGNIITKNRNNLAPTTVKLLVLLRHSWKIVEE
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mRNA from alignment at H-elongata_contig938:12868..14412+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig938.16816.1 ID=mRNA_H-elongata_contig938.16816.1|Name=mRNA_H-elongata_contig938.16816.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1545bp|location=Sequence derived from alignment at H-elongata_contig938:12868..14412+ (Himanthalia elongata Himel1 dioecious)
CACGTGTGCATCACCTCCGACGGCTGGACCTCTTGCGCCAACGACACCTA CATGTCGCTGATGGTCACCCTGATCACCAGCACCTGGAAGCTCGTCACTT TCTCGGTGAACTGCAGTAAGTCGGAAGGAACGACGACAGGTGATGCTCTT TCTGCTGATATAAAAGCCGCGGTGGTGAAGCATGGTTTGACTGGCAAGGT TACTGCGGTTACTACTGACTGTGAGCCTTCAATGGTGAAGATGGGGCGCC TCCTCGAAGAAGGCGACGTTTGCACCCACATCGGCTGCTGCAACCACCGG CTTGAAAGCACCACCTCCGTCGTCTTCAACGGGCCGAGGGTCAAAAAGGT TATGGCCTTGGCCCGCGGCTTGGTAACGTGATACTCGACATCAAGCCAGG CGGCCGACAGCCTCAAGTAGTTTGTCAAGATCTACTTTGGTTTTTAAAAT AAGCGGGTGATCCAGGACGTGGCAACCAGGTGGTGGTCCACATGCAGCAT GGTAGCGCGACTGTTAGAGCTTAAGGTAGCAATCGACAAGCACGAGGCGG CTGACAATCTGGACCCGCTGCTTTCAGCGGCAGACTGGACGATTCTTGAG CTGATATTGCCTATCCTGGAACCGTTCAGGCACACCCAGACTTTGCTTGA GGGCCGCAAGTATGTGACGGGTAGCTTCGTCGTACCCTTCATCTTTGACC TCGGTAACAGCCTCGAGGACGCGATCGACGACCTCAACGAGCTACCGCCC AGCTTGGACGCCGAGGTCAACACGGCGAGGGTGGCGGTGATGACGTGCGT CATCGCGCTCCGAGACGATTTTATCAACCGGTGGGGAGACGGACGCGACA TTCTGACCTACGCGGAGGACAACAGGCGGCAACCACGTGGTTTCAAACCT GTGCAGGTGCTGGCAACCGCACTCGACCCTCGCACGAAGATACTATATGG AGTGTAAGAAAACGAGAAGGCCGAAGTTTGGAAGCTCGTGCAGGAAGAGG CGGTGAAGATCGCCGTGGAAAACCGCAAAGAGGAAAAATATCAGGCTGCC TCGTCGCAGCAACGACCGGAAGCAGTGGCAGCAACGGCATCATCGACCAG CAGTGCAGGCGAAGAGGACACCTCGAGAAAGCGCCGGTGCCGTGGTGGTG GTGGGTTCATGGCAGCGGCGCAAGCGGTTGGAGACGCACCAACCCAGCAG CTGGGCAAAGGCACTGATAGCTCCACCACCAGCCTCATCACGAACTCGGC GCGGGTGGAGCTTAAAGCCTTCCAGACGTCCATAGGTGTCAAGATTTACG AGTTAGACAACGAAGGCACAAAGATGTACATTGACCCCTTGGACTGGTGG CGGGTACGGTGCACAGACTTCCCGCACCTGGCCAACCTCGCCCGCCGTGT GCTGGCGATCCCCGCCACTCAGGCAGAGTCCGAGTGCCTGTTTTCCTGCG CTGGAAACATCATCACGAAGAATCGCAACAACTTGGCCCCCACCACCGTC AAACTGCTCGTCCTCCTGCGCCACTCGTGGAAAATAGTGGAGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig938:12868..14412+

>mRNA_H-elongata_contig938.16816.1 ID=mRNA_H-elongata_contig938.16816.1|Name=mRNA_H-elongata_contig938.16816.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1704bp|location=Sequence derived from alignment at H-elongata_contig938:12868..14412+ (Himanthalia elongata Himel1 dioecious)
ATGGTAGCGCGACTGTTAGAGCTTAAGGTAGCAATCGACAAGCACGAGGC
GGCTGACAATCTGGACCCGCTGCTTTCAGCGGCAGACTGGACGATTCTTG
AGCTGATATTGCCTATCCTGGAACCGTTCAGGCACACCCAGACTTTGCTT
GAGGGCCGCAAGTATGTGACGGGTAGCTTCGTCGTACCCTTCATCTTTGA
CCTCGGTAACAGCCTCGAGGACGCGATCGACGACCTCAACGAGCTACCGC
CCAGCTTGGACGCCGAGGTCAACACGGCGAGGGTGGCGGTGATGACGTGC
ATGGTAGCGCGACTGTTAGAGCTTAAGGTAGCAATCGACAAGCACGAGGC
GGCTGACAATCTGGACCCGCTGCTTTCAGCGGCAGACTGGACGATTCTTG
AGCTGATATTGCCTATCCTGGAACCGTTCAGGCACACCCAGACTTTGCTT
GAGGGCCGCAAGTATGTGACGGGTAGCTTCGTCGTACCCTTCATCTTTGA
CCTCGGTAACAGCCTCGAGGACGCGATCGACGACCTCAACGAGCTACCGC
CCAGCTTGGACGCCGAGGTCAACACGGCGAGGGTGGCGGTGATGACGTGC
GAAGAGGCGGTGAAGATCGCCGTGGAAAACCGCAAAGAGGAAAAATATCA
GGCTGCCTCGTCGCAGCAACGACCGGAAGCAGTGGCAGCAACGGCATCAT
CGACCAGCAGTGCAGGCGAAGAGGACACCTCGAGAAAGCGCCGGTGCCGT
GGTGGTGGTGGGTTCATGGCAGCGGCGCAAGCGGTTGGAGACGCACCAAC
CCAGCAGCTGGGCAAAGGCACTGATAGCTCCACCACCAGCCTCATCACGA
ACTCGGCGCGGGTGGAGCTTAAAGCCTTCCAGACGTCCATAGGTGTCAAG
ATTTACGAGTTAGACAACGAAGGCACAAAGATGTACATTGACCCCTTGGA
CTGGTGGCGGGTACGGTGCACAGACTTCCCGCACCTGGCCAACCTCGCCC
GCCGTGTGCTGGCGATCCCCGCCACTCAGGCAGAGTCCGAGTGCCTGTTT
TCCTGCGCTGGAAACATCATCACGAAGAATCGCAACAACTTGGCCCCCAC
CACCGTCAAACTGCTCGTCCTCCTGCGCCACTCGTGGAAAATAGTGGAGG
AGGAAGAGGCGGTGAAGATCGCCGTGGAAAACCGCAAAGAGGAAAAATAT
CAGGCTGCCTCGTCGCAGCAACGACCGGAAGCAGTGGCAGCAACGGCATC
ATCGACCAGCAGTGCAGGCGAAGAGGACACCTCGAGAAAGCGCCGGTGCC
GTGGTGGTGGTGGGTTCATGGCAGCGGCGCAAGCGGTTGGAGACGCACCA
ACCCAGCAGCTGGGCAAAGGCACTGATAGCTCCACCACCAGCCTCATCAC
GAACTCGGCGCGGGTGGAGCTTAAAGCCTTCCAGACGTCCATAGGTGTCA
AGATTTACGAGTTAGACAACGAAGGCACAAAGATGTACATTGACCCCTTG
GACTGGTGGCGGGTACGGTGCACAGACTTCCCGCACCTGGCCAACCTCGC
CCGCCGTGTGCTGGCGATCCCCGCCACTCAGGCAGAGTCCGAGTGCCTGT
TTTCCTGCGCTGGAAACATCATCACGAAGAATCGCAACAACTTGGCCCCC
ACCACCGTCAAACTGCTCGTCCTCCTGCGCCACTCGTGGAAAATAGTGGA
GGAG
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