mRNA_H-elongata_contig93796.16815.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 151 bits (381), Expect = 8.370e-41 Identity = 69/90 (76.67%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 1 ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
E GQRCFPSP +SNDAGTDRI + PS DR+G C+N++G++E GLTYEGELNKV +NV +GRSHLGVH+RMDGVFGAEMGEAGAIRRLQQ
Sbjct: 470 ELGQRCFPSPMISNDAGTDRIPFVPSDGDRVGTCINEDGEEEVGLTYEGELNKVTSNVAIGRSHLGVHWRMDGVFGAEMGEAGAIRRLQQ 559
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: A0A3G3BM34_SACJA (Vanadium-dependent bromine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM34_SACJA) HSP 1 Score: 129 bits (323), Expect = 1.180e-32 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 1 ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
E GQRCFP P VSN+ GT+RI Y PS + +G C+ND G GLTYEGELNKV+ANV++GRSHLGVH+RMDGV+GA +GE A+RRLQQ
Sbjct: 503 EAGQRCFPDPVVSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHLGVHWRMDGVYGALVGEVSAVRRLQQ 592
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA) HSP 1 Score: 129 bits (323), Expect = 1.210e-32 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 1 ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
E GQRCFP P VSN+ GT+RI Y PS + +G C+ND G GLTYEGELNKV+ANV++GRSHLGVH+RMDGV+GA +GE A+RRLQQ
Sbjct: 514 EAGQRCFPDPVVSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHLGVHWRMDGVYGALVGEVSAVRRLQQ 603
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.060e-32 Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 1 ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
E GQ+CFP+P VSND GT RI Y+PS + +G CVN+ G GLTYEGELNK++ANV+LGRSH+GVH+RMDGV+GA MGE +RRLQQ
Sbjct: 504 EAGQKCFPNPVVSNDEGTKRIKYKPSGREIVGECVNEKGKLVEGLTYEGELNKISANVLLGRSHIGVHWRMDGVYGALMGETSCVRRLQQ 593
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: B7ZGM5_9PHAE (Putative vanadium-dependent bromoperoxidase 7 (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM5_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.880e-29 Identity = 56/90 (62.22%), Postives = 70/90 (77.78%), Query Frame = 1
Query: 1 ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
E GQ+CFP+P S+D G R+ Y P+ T+ L CV+ +G+ GLT EGELNKVA+NVI+GRSHLGVH+RMDGV+GA MGE A+RRLQQ
Sbjct: 253 EAGQKCFPNPVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVYGALMGETSAVRRLQQ 342
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI) HSP 1 Score: 112 bits (280), Expect = 8.270e-27 Identity = 57/91 (62.64%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 ERGQRCFPSPKV-SNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
E GQRC+ V SND GT RI+Y P + C++ NG + GLTYEGELNKVA+NVI+GRSH+GVHYRMDGV+GA MGE A+RRLQQ
Sbjct: 474 ELGQRCYLGDLVVSNDEGTKRIEYVPRKGE---TCIDQNGREVQGLTYEGELNKVASNVIIGRSHIGVHYRMDGVYGALMGETSAVRRLQQ 561
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: B7ZGM1_9PHAE (Putative vanadium-dependent bromoperoxidase 3 n=4 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM1_9PHAE) HSP 1 Score: 112 bits (280), Expect = 8.300e-27 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 1 ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
E GQ+CFP+ S+D G R+ Y P+ T+ L CV+ +G+ GLT EGELNKVA+NVI+GRSHLGVH+RMDGV GA MGE A+RRLQQ
Sbjct: 470 EAGQKCFPNLVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVSGALMGETSAVRRLQQ 559
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 7.770e-11 Identity = 39/91 (42.86%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 1 ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAG-LTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQ 270
ERG CF P +D G + Y GDD LT+EGE+NK+A NV LGR+ LGVH+R+D G +GE A+R LQQ
Sbjct: 501 ERGSVCFNDPVFPDDEGLTLLPYT--------------GDDGNNCLTFEGEINKLAVNVALGRNMLGVHWRIDSELGLLLGETAAVRILQQ 577
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: A0A7J9SEP0_9EURY (Vanadium-dependent haloperoxidase n=1 Tax=Halobellus ruber TaxID=2761102 RepID=A0A7J9SEP0_9EURY) HSP 1 Score: 61.2 bits (147), Expect = 8.290e-9 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 103 VNDNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQ-QVQHPAR 288
+D G DE LT GELNK+A+N+ LGR+ G+HYR DG+ G +GEA AIR L+ Q+ P R
Sbjct: 509 TSDLGVDET-LTVRGELNKLASNMALGRNRAGIHYRTDGIEGLRLGEAAAIRYLEDQLSLPVR 570
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Match: A0A2D7GXT8_ALTSX (Phosphoesterase n=3 Tax=Alteromonas TaxID=226 RepID=A0A2D7GXT8_ALTSX) HSP 1 Score: 60.5 bits (145), Expect = 1.520e-8 Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 133 LTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQVQHPAR 288
LT EGELNK+A+N+ LGR+ GVHYR DG +G +GE AI L+++ H R
Sbjct: 435 LTIEGELNKLASNISLGRNFAGVHYRSDGDYGLVLGEEYAISALREIAHQYR 486 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93796.16815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig93796.16815.1 >prot_H-elongata_contig93796.16815.1 ID=prot_H-elongata_contig93796.16815.1|Name=mRNA_H-elongata_contig93796.16815.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp ERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVNDNGDDEAGLTYEGEback to top mRNA from alignment at H-elongata_contig93796:1987..2528- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig93796.16815.1 ID=mRNA_H-elongata_contig93796.16815.1|Name=mRNA_H-elongata_contig93796.16815.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=542bp|location=Sequence derived from alignment at H-elongata_contig93796:1987..2528- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig93796:1987..2528- >mRNA_H-elongata_contig93796.16815.1 ID=mRNA_H-elongata_contig93796.16815.1|Name=mRNA_H-elongata_contig93796.16815.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at H-elongata_contig93796:1987..2528- (Himanthalia elongata Himel1 dioecious)back to top |