prot_H-elongata_contig93754.16809.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93754.16809.1
Unique Nameprot_H-elongata_contig93754.16809.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length249
Homology
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: D7G8K5_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K5_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.900e-59
Identity = 130/241 (53.94%), Postives = 149/241 (61.83%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALELDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQAPLNSSQPGVAPPGISDEDVFDLVEGFSRENQPSAADGGPGVGDGRGMYASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVS 244
            +VNLLKRLLRP++ GVEVRSVDGFQGGEKEAIVLSLVRSN G++VGFLADARRLNVAVTRAKRHVA+VCDAECCGSD FI RLLRH+E+RGEYRSALEL P             + A S+                                           +SDE+V   V+ F+ E +P+  +     GDG G     LELP +LT RQRAL HE AE LGLGH S GEG  R LV+S
Sbjct:  662 QVNLLKRLLRPEHPGVEVRSVDGFQGGEKEAIVLSLVRSNAGKKVGFLADARRLNVAVTRAKRHVAIVCDAECCGSDPFIGRLLRHVEDRGEYRSALELTPETCG---------DFAESSVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEK--------LSDEEVLRRVQEFA-EQEPTHDNDEEEKGDGEGR----LELPPQLTARQRALAHETAEWLGLGHVSVGEGPRRVLVLS 880          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: A0A6H5KL97_9PHAE (R3H domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL97_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 6.460e-38
Identity = 97/199 (48.74%), Postives = 115/199 (57.79%), Query Frame = 0
Query:   46 RRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALELDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQAPLNSSQPGVAPPGISDEDVFDLVEGFSRENQPSAADGGPGVGDGRGMYASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVS 244
            ++VGFLADARRLNVAVTRAKRHVA+VCDAECCGSD FI RLLRH+E+RGEYRSALEL P  D   ++              T  G G+  +    Y       + G+              +SDE+V   V+GF+ + +    D     GD  G     LELP ELT RQRAL HE AE LGLGH S GEG  R LV+S
Sbjct:    7 KKVGFLADARRLNVAVTRAKRHVAIVCDAECCGSDPFIGRLLRHVEDRGEYRSALELTPETDGDFAESAAXXXXXXXXXXRTAAG-GVAGRKGKKYG------EEGEEEK-----------LSDEEVLRRVQGFAEQERTYDNDEQE-KGDDEGR----LELPPELTARQRALAHETAEWLGLGHVSVGEGPRRVLVLS 182          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: UPI001B34AECD (DNA-binding protein SMUBP-2 isoform X1 n=3 Tax=Ochotona curzoniae TaxID=130825 RepID=UPI001B34AECD)

HSP 1 Score: 142 bits (357), Expect = 8.130e-35
Identity = 100/250 (40.00%), Postives = 134/250 (53.60%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALELDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQAPLNSSQPGVAPPGISDEDVFDLVEGFSRENQPSAADGGPGVGDGRGMYA-------STLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVSCR 246
            +V+LL++ L  ++  +E+RSVDGFQG EKEA++LSLVRSN    VGFLA+ RR+NVAVTRA+RHVA+VCD+    S  F++ LL H  E G+ R+A E     D I  DH Y +E  + +      G+  +   D    +   G   G+ P    +PG   PG        L  G      PSA   G G+   R + A       + LE P  L   +R  VH++AE LGL H S GEG  R + VS R
Sbjct:  543 QVDLLRQSLAHRHPDLEIRSVDGFQGREKEAVILSLVRSNRKGEVGFLAEDRRINVAVTRARRHVAIVCDSRTVTSHPFLKTLLSHFTEHGDVRTAFEY---LDDIVPDH-YSHESTQGH------GQAAQKPRDAAMAATKPG--GGRRP--GRKPGGKVPGPPTHSQASLNGG-----SPSAVGSGDGLEHFRALLAEFVAGEQTRLEFPASLNSHERLRVHQLAEELGLRHESSGEGKARHITVSKR 773          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: UPI0012AC41A7 (DNA-binding protein SMUBP-2-like n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=UPI0012AC41A7)

HSP 1 Score: 138 bits (348), Expect = 3.240e-34
Identity = 92/246 (37.40%), Postives = 131/246 (53.25%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALE----LDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQAPLNSSQPGVAPPGIS-DEDVFDLV-EGFSRENQPSAADGGPGVGDGRGMYASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVV 243
            +V++L+  L  +Y  +E++SVDGFQG EKEA++LS VRSN    VGFLA+ RR+NVAVTRA+RHVA++CD+   GS AF+ RLL H  + G+ R+A E    L P   +   + Q   +   +  P T    G + ++    K+     Q  +   ++S PGV  PG   D + F  V E F    +                  + L+ P  L+P  R LVH +AE  GL H S GEG +R + V
Sbjct:   94 QVDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIICDSHTVGSQAFLGRLLEHFRQHGQVRTAFEYLDDLVPENYSHGGERQQSTKAPAAPSPKTQPAAGRKPKAAAAAKAAPQ-KQAARCSPSASGPGVDSPGTKGDTNKFKAVLEAFLESGE------------------TQLDFPSSLSPHDRLLVHLLAEEHGLQHVSTGEGRDRYISV 320          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: A0A6P4T2P5_PANPR (DNA-binding protein SMUBP-2 isoform X1 n=37 Tax=Felidae TaxID=9681 RepID=A0A6P4T2P5_PANPR)

HSP 1 Score: 139 bits (351), Expect = 5.150e-34
Identity = 103/256 (40.23%), Postives = 134/256 (52.34%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALE-LD---PSPDAIESDHQYDYECARSNEPVTVDGR--GIRVQSDIVYKSVDSGVQRGQAPLNSSQPGVAPPGISDEDVFDLVEGFSRENQPSAADGGPGVGDGRGMYA-------STLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVSCR 246
            +V+LL++ L  ++  +E++SVDGFQG EKEA+VLS VRSN    VGFLA+ RR+NVAVTRA+RHVAVVCD+    S AF++ L+ H  E GE R+A E LD   P   + ES   +    AR  +P    G+  G R +  +      +G+QR         PG  P G        L  G      P AADGG      R   A       + LE P  L    R  +H++AE  GL H S GEG  R + VS R
Sbjct:  541 QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVNSHAFLKTLVDHFTEHGEVRTAFEYLDDIVPENYSHESSQGHGQAGARPRDPAAAAGKPPGSRPREGVQEALAAAGLQR-------KTPGGKPSGPEVGSQPSLNGGGLC---PEAADGGDRADRFRAEIAEFVASENTRLEFPASLNSHDRMWIHQIAEEHGLRHDSTGEGKKRFITVSKR 786          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: UPI00094E5627 (DNA-binding protein SMUBP-2 isoform X3 n=1 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094E5627)

HSP 1 Score: 139 bits (350), Expect = 6.410e-34
Identity = 90/246 (36.59%), Postives = 135/246 (54.88%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALELDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQA--PLNSSQPGVAPPGIS---DEDVFDLVEGFSRENQPSAADGGPGVGDGRGMYASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVS 244
            +V+LL++ L  ++  +E++SVDGFQG EKEA+VLSLVRSN    VGFLA+ RR+NVAVTRA+RHVA+VCD +   + AF++ L+ H+ E GE R+A E     D +  ++  D++  + +   T    G + +  +  KS  S  Q  +   P+ +    +A          ++ ++VE F +                  +  S LE P       R LVH++AE LGL H SKGEG +R + VS
Sbjct:  388 QVDLLRQKLSARHPALEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRHVAIVCDTQTVQNHAFLKTLVHHVTEYGEVRTAFEY--LQDIVPQNYVRDHKDTKPDTSTTQKPEGKKPKP-VPKKSSGSSTQANKRNNPIKACVSALAEEEQKRNRQSEIREMVENFMKN-----------------LSKSELEFPPSFNSHDRLLVHQIAEELGLTHQSKGEGKDRCITVS 613          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: A0A7L1NCZ1_RHICY (SMBP2 protein (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1NCZ1_RHICY)

HSP 1 Score: 139 bits (350), Expect = 6.910e-34
Identity = 103/257 (40.08%), Postives = 131/257 (50.97%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALE-LDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKS-----VDSGVQRGQAPLNSSQPGVAPPGISDEDVFDLVEGFSRENQPSAADGGPGVGDGRGMY-----------ASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVV 243
            +V+LL+  L  ++  +EVRSVDGFQG EKEA++LSLVRSN    VGFLA+ RR+NVAVTRA+RHVA++CD+   GS  F+ RLL H  + GE RSA E LD   D +   +       R          G R Q     +        +G  +G+A       G +P             G SR+   S     PG GDG G +           A  L+LP  L+P +R LVH  AE LGL HAS G G  R L V
Sbjct:  516 QVDLLREHLCQQHPQLEVRSVDGFQGREKEAVILSLVRSNRKGEVGFLAEERRINVAVTRARRHVAIICDSRTVGSQPFLRRLLGHFTQHGEQRSAFEYLD---DLVPEGYPQQSRGERPPGAKPPAATGPRAQPPPRRRGKAAAVAGTGGHKGEA-------GGSP-------------GTSRQRAAS-----PGAGDGAGRWRAMLEAFLQSSAEQLDLPPALSPHERMLVHAAAEQLGLQHASSGHGRQRYLSV 744          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: A0A3Q2YBK8_HIPCM (Immunoglobulin mu DNA binding protein 2 n=3 Tax=Syngnathidae TaxID=72045 RepID=A0A3Q2YBK8_HIPCM)

HSP 1 Score: 139 bits (350), Expect = 6.970e-34
Identity = 90/246 (36.59%), Postives = 135/246 (54.88%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALELDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQA--PLNSSQPGVAPPGIS---DEDVFDLVEGFSRENQPSAADGGPGVGDGRGMYASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVS 244
            +V+LL++ L  ++  +E++SVDGFQG EKEA+VLSLVRSN    VGFLA+ RR+NVAVTRA+RHVA+VCD +   + AF++ L+ H+ E GE R+A E     D +  ++  D++  + +   T    G + +  +  KS  S  Q  +   P+ +    +A          ++ ++VE F +                  +  S LE P       R LVH++AE LGL H SKGEG +R + VS
Sbjct:  542 QVDLLRQKLSARHPALEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRHVAIVCDTQTVQNHAFLKTLVHHVTEYGEVRTAFEY--LQDIVPQNYVRDHKDTKPDTSTTQKPEGKKPKP-VPKKSSGSSTQANKRNNPIKACVSALAEEEQKRNRQSEIREMVENFMKN-----------------LSKSELEFPPSFNSHDRLLVHQIAEELGLTHQSKGEGKDRCITVS 767          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: A0A803Y3T0_MELGA (Uncharacterized protein n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=A0A803Y3T0_MELGA)

HSP 1 Score: 138 bits (348), Expect = 7.740e-34
Identity = 92/246 (37.40%), Postives = 131/246 (53.25%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALE----LDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQAPLNSSQPGVAPPGIS-DEDVFDLV-EGFSRENQPSAADGGPGVGDGRGMYASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVV 243
            +V++L+  L  +Y  +E++SVDGFQG EKEA++LS VRSN    VGFLA+ RR+NVAVTRA+RHVA++CD+   GS AF+ RLL H  + G+ R+A E    L P   +   + Q   +   +  P T    G + ++    K+     Q  +   ++S PGV  PG   D + F  V E F    +                  + L+ P  L+P  R LVH +AE  GL H S GEG +R + V
Sbjct:  146 QVDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIICDSHTVGSQAFLGRLLEHFRQHGQVRTAFEYLDDLVPENYSHGGERQQSTKAPAAPSPKTQPAAGRKPKAAAAAKAAPQ-KQAARCSPSASGPGVDSPGTKGDTNKFKAVLEAFLESGE------------------TQLDFPSSLSPHDRLLVHLLAEEHGLQHVSTGEGRDRYISV 372          
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Match: A0A1S3W5L3_ERIEU (DNA-binding protein SMUBP-2 n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3W5L3_ERIEU)

HSP 1 Score: 138 bits (348), Expect = 1.290e-33
Identity = 97/251 (38.65%), Postives = 138/251 (54.98%), Query Frame = 0
Query:    4 KVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGFLADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSALE----LDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQRGQAPLNSSQPGVAPP--GISDEDVF-DLVEGFSRENQPSAADGGPGVGDGRGMYASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVSCRG 247
            +V+LL++ L P++  +E+RSVDGFQG EKEA++LSLVRSN    VGFLA+ RR+NVAVTRA+RHVA+VCD+   GS  F+  L+ HI   G+ R+A E    L P   + E         A+S    T   +  R + ++      +   R +   + ++P +AP   G    D F +L+  F              + DGR    + L+ P  L+  +R  VH++AE LGL H S GEG +R L VS RG
Sbjct:  539 QVDLLRQSLEPQHPELEIRSVDGFQGREKEAVLLSLVRSNRKGEVGFLAEDRRINVAVTRARRHVALVCDSRTVGSHPFLRTLVEHITAHGQVRTAFEYLDDLVPENYSHEGFQGPGPAAAKSQGTATSARKPPRQRREVARPEQKAAGGRPRGLESRTRPSLAPTEGGPQRADRFRELLVEF--------------LADGR----TRLDFPASLSAHERLRVHQLAEELGLRHESSGEGRDRFLTVSKRG 771          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93754.16809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8K5_ECTSI1.900e-5953.94R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KL97_9PHAE6.460e-3848.74R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
UPI001B34AECD8.130e-3540.00DNA-binding protein SMUBP-2 isoform X1 n=3 Tax=Och... [more]
UPI0012AC41A73.240e-3437.40DNA-binding protein SMUBP-2-like n=1 Tax=Meleagris... [more]
A0A6P4T2P5_PANPR5.150e-3440.23DNA-binding protein SMUBP-2 isoform X1 n=37 Tax=Fe... [more]
UPI00094E56276.410e-3436.59DNA-binding protein SMUBP-2 isoform X3 n=1 Tax=Hip... [more]
A0A7L1NCZ1_RHICY6.910e-3440.08SMBP2 protein (Fragment) n=1 Tax=Rhinopomastus cya... [more]
A0A3Q2YBK8_HIPCM6.970e-3436.59Immunoglobulin mu DNA binding protein 2 n=3 Tax=Sy... [more]
A0A803Y3T0_MELGA7.740e-3437.40Uncharacterized protein n=1 Tax=Meleagris gallopav... [more]
A0A1S3W5L3_ERIEU1.290e-3338.65DNA-binding protein SMUBP-2 n=1 Tax=Erinaceus euro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001374R3H domainPFAMPF01424R3Hcoord: 204..244
e-value: 3.0E-7
score: 30.3
IPR001374R3H domainPROSITEPS51061R3Hcoord: 181..247
score: 10.562
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 196..248
e-value: 5.6E-12
score: 47.3
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 206..244
NoneNo IPR availableGENE3D3.40.50.300coord: 1..105
e-value: 1.2E-30
score: 108.3
NoneNo IPR availablePANTHERPTHR43788:SF3P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEINcoord: 4..99
NoneNo IPR availablePANTHERPTHR43788FAMILY NOT NAMEDcoord: 4..99
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 4..74
e-value: 7.8E-24
score: 84.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93754contigH-elongata_contig93754:40..1211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93754.16809.1mRNA_H-elongata_contig93754.16809.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93754 40..1211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93754.16809.1 ID=prot_H-elongata_contig93754.16809.1|Name=mRNA_H-elongata_contig93754.16809.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
FFSKVNLLKRLLRPKYSGVEVRSVDGFQGGEKEAIVLSLVRSNEGRRVGF
LADARRLNVAVTRAKRHVAVVCDAECCGSDAFIERLLRHIEERGEYRSAL
ELDPSPDAIESDHQYDYECARSNEPVTVDGRGIRVQSDIVYKSVDSGVQR
GQAPLNSSQPGVAPPGISDEDVFDLVEGFSRENQPSAADGGPGVGDGRGM
YASTLELPVELTPRQRALVHEMAEGLGLGHASKGEGINRTLVVSCRGRI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001374R3H_dom
IPR036867R3H_dom_sf
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase