mRNA_H-elongata_contig93742.16808.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig93742.16808.1
Unique NamemRNA_H-elongata_contig93742.16808.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: D7FVR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR0_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 2.380e-91
Identity = 160/299 (53.51%), Postives = 182/299 (60.87%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDIGREFL-----STSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRISD 882
            GNEADV+LYL A+GLMWENAPAF ALLVFAEHRFYGESLPFGAPD  REFL      T QALADYARL++ L++EL AE APVIAFGGSYGGMLA+WLRLKYPH+VHGA+AASAPVLA+EGL RPTP+PE+FA TVT AAGPAGGA + C+AN                                                                                           P+G+ AL+ELAWW R+AFDYLAMGN+PY TGY+LN G VELP WPLREACS ++D
Sbjct:  148 GNEADVSLYLEASGLMWENAPAFNALLVFAEHRFYGESLPFGAPDKRREFLRQATAGTPQALADYARLVTALKQELGAEGAPVIAFGGSYGGMLASWLRLKYPHIVHGAIAASAPVLALEGLHRPTPNPEAFAETVTAAAGPAGGAADSCAAN-------------------------------------------------------------------------------------------PRGDGALVELAWWARAAFDYLAMGNFPYATGYMLNSGEVELPPWPLREACSYLAD 355          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A7S3FQQ3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FQQ3_9CHLO)

HSP 1 Score: 215 bits (547), Expect = 1.730e-62
Identity = 128/289 (44.29%), Postives = 161/289 (55.71%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDIGREFLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREAC 867
            GNEADVTLYL ATG MWENAP   ALLVFAEHR+YGES PFGA     ++L++ QALADYA LI  L+ +  A  +PVIAFGGSYGGML++W R+KYPHVV GA AASAP+ +  G   P  D  SFA  VT  A    GA E CS NVR ++ A+ + +G A  R+                                                           RV    R+C G   + +D +  L +W +++FDY+AMGNYPYP+ Y+LNG G +LPA+P+R AC
Sbjct:  132 GNEADVTLYLNATGFMWENAPEVGALLVFAEHRYYGESKPFGADMSNLQYLTSEQALADYADLIEYLKTDFGAVKSPVIAFGGSYGGMLSSWFRMKYPHVVDGAFAASAPIWSFLG-EYPPYDAGSFAKVVTYDATREAGAAEYCSMNVRNSWQAVRNESGTAEGRN-----------------------------------------------------------RVREAFRLCDGVPLESDDNVTALLYWAQTSFDYMAMGNYPYPSSYMLNGKG-DLPAFPMRVAC 359          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A8J9R8Q3_9CHLO (Lysosomal Pro-X carboxypeptidase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9R8Q3_9CHLO)

HSP 1 Score: 208 bits (529), Expect = 4.440e-60
Identity = 125/293 (42.66%), Postives = 166/293 (56.66%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFG-APDIGREFLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRI 876
            GNEADVTLYL ATG+MWE+AP+F ALLVFAEHR+YGES PF  A     ++L++ QA+ADYA L+  L+ E +AE + VI FGGSYGGMLA W+R+KYPH++ GA+A SAP+ +  G   P  D  S+A  VTR A   GG+   C++NVR+A++ +                         E GR   G   + +A                                   +RVC  R+    D ++ LA W  SA+DY+AMGNYPYP+ YILNG G+ LPA+P+R AC  +
Sbjct:   78 GNEADVTLYLNATGIMWESAPSFGALLVFAEHRYYGESKPFKKALRHHMQYLTSEQAMADYAELVMELKEEFKAESSAVIGFGGSYGGMLATWMRIKYPHILDGAIAGSAPIWSYLG-EDPPYDSGSYAKIVTRDASEEGGSAPACASNVRKAWSTLF------------------------EMGRNDSGRGKIETA-----------------------------------MRVCP-RLLNSSDDVMALANWASSAWDYMAMGNYPYPSTYILNGMGI-LPAYPVRVACESL 308          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A2P6TKN8_CHLSO (Thioredoxin-dependent peroxiredoxin n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKN8_CHLSO)

HSP 1 Score: 212 bits (540), Expect = 1.440e-58
Identity = 127/298 (42.62%), Postives = 162/298 (54.36%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDIGRE----FLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRISD 882
            GNEADVTLYL  TGLMWE AP   ALLVFAEHRFYG+S PF    + ++    +L+T QA+ADYA LI  L+ EL+   APVI FGGSYGGMLA W RLKYPH++ GA+AASAP+   +G   P  DP +FA  VT+ A P GG+ E C+ NVR+ + A                                  L+ LG   E   AI                         ++ +R+C     + E  +  L  W  SA+DY+AMGNYPYP+ YI+NG    LPA+P+R AC  ++D
Sbjct: 2080 GNEADVTLYLNNTGLMWELAPRHHALLVFAEHRFYGQSKPFKPSKLRKQKHMGYLTTEQAMADYATLIWELKEELKDPDAPVIGFGGSYGGMLATWFRLKYPHLLDGAIAASAPIWTYKG-EDPPVDPGAFARIVTQDASPEGGSAEACAQNVRQTWRA----------------------------------LQDLGGTEEGRQAI-------------------------SQAMRLCEDSALESEGDVTALRDWAASAWDYMAMGNYPYPSSYIINGAQPPLPAFPVRAACEHLAD 2317          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A4D9D674_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D674_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.500e-58
Identity = 130/302 (43.05%), Postives = 165/302 (54.64%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLP---FGAPDIGREFLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVL------AMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRIS 879
            GNEADVTLYL A+GLMWENAP F ALLVFAEHR+YG+S P   F A  +  ++LS+ QALADYARLI  L+ EL +  +PVIAFGGSYGGMLA+W RL YPH+V GA+A SAPVL        EG+       ESF+  VTR A P GG+   C+ NVR A+               P + D+A++    +                                             +    R+C G +   ED  L L  W +SA+ Y+AMGNYP+P+ Y+LNG G  LPAWP+R AC  ++
Sbjct:   98 GNEADVTLYLNASGLMWENAPEFGALLVFAEHRYYGKSQPLQPFTAHKM--DYLSSEQALADYARLIIALKTELNSPDSPVIAFGGSYGGMLASWWRLLYPHLVSGAIAGSAPVLDFEPEVGKEGI-------ESFSYIVTRDASPEGGSNAYCADNVRAAW---------------PVIKDLAASVTGRQE--------------------------------------------LTERFRICQGALATAEDVDL-LFGWLQSAWAYMAMGNYPFPSTYVLNGRGT-LPAWPVRVACESLN 329          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A1D2A5Y0_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A5Y0_AUXPR)

HSP 1 Score: 200 bits (508), Expect = 7.760e-58
Identity = 125/295 (42.37%), Postives = 155/295 (52.54%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDI-GREFLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRISD 882
            GNEADVTLYL  +GLMWE  P   ALLVFAEHR+YGES PF         +L+T QA+ADYA LI  LR EL    APV+ FGGSYGGMLAAW R+KYPH++ GA+A SAP+    G   P  D   FAA VTR A   GG+   C AN R  +  +                       D+E GR K                                        +++ L +C+   P+    +  LA W + A+DYLAMGNYPYP+GY+LNG G ELPA+P+R AC  ++D
Sbjct:   94 GNEADVTLYLNNSGLMWELGPKHSALLVFAEHRYYGESKPFKKRTRHSMHWLTTEQAMADYAELIWELRTELGDVDAPVVGFGGSYGGMLAAWFRMKYPHLLDGAIAGSAPIWTFLG-EDPAYDAGGFAAVVTRDASEEGGSAPACVANARAGWKLLFK-------------------LGDSEAGRHK----------------------------------------LSQALGLCSRAAPRTSADVEALAEWLQGAWDYLAMGNYPYPSGYMLNGDG-ELPAYPVRVACQHLAD 327          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A087SS73_AUXPR (Lysosomal Pro-X carboxypeptidase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SS73_AUXPR)

HSP 1 Score: 200 bits (508), Expect = 1.260e-57
Identity = 125/295 (42.37%), Postives = 155/295 (52.54%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDI-GREFLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRISD 882
            GNEADVTLYL  +GLMWE  P   ALLVFAEHR+YGES PF         +L+T QA+ADYA LI  LR EL    APV+ FGGSYGGMLAAW R+KYPH++ GA+A SAP+    G   P  D   FAA VTR A   GG+   C AN R  +  +                       D+E GR K                                        +++ L +C+   P+    +  LA W + A+DYLAMGNYPYP+GY+LNG G ELPA+P+R AC  ++D
Sbjct:   44 GNEADVTLYLNNSGLMWELGPKHSALLVFAEHRYYGESKPFKKRTRHSMHWLTTEQAMADYAELIWELRTELGDVDAPVVGFGGSYGGMLAAWFRMKYPHLLDGAIAGSAPIWTFLG-EDPAYDAGGFAAVVTRDASEEGGSAPACVANARAGWKLLFK-------------------LGDSEAGRHK----------------------------------------LSQALGLCSRAAPRTSADVEALAEWLQGAWDYLAMGNYPYPSGYMLNGDG-ELPAYPVRVACQHLAD 277          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A8J4CH77_9CHLO (Uncharacterized protein n=5 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CH77_9CHLO)

HSP 1 Score: 204 bits (518), Expect = 3.300e-57
Identity = 124/295 (42.03%), Postives = 164/295 (55.59%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDIGRE--FLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRIS 879
            GNEADVTLY+ ATGL+WE+A  F AL++F EHR+YG++ PFG      +  +LS  QA+ADYA L+  LR ++ AE +P+IAFGGSYGGMLAAWLRLKYPH++ GAVAASAPV A  G+  P  +P  F   VT  A  + GA   C++NVR AF  +L+                         GR   G + LG                                   RLLR+C     + E A++++A+W + AFD  AMGNYPYP+ YI+      LPAWP+R AC+ ++
Sbjct:  213 GNEADVTLYVNATGLIWEHAEEFGALVIFVEHRYYGKTQPFGPDSWSTDPSYLSVEQAMADYATLLWHLRSQMGAEDSPIIAFGGSYGGMLAAWLRLKYPHLIAGAVAASAPVGAFPGV--PGWEPSRFWQVVTYDATASAGAAPACASNVRAAFRHVLT------------------------LGRTVGGRKTLG-----------------------------------RLLRLCEDI--QDEAAVVDVAYWLQGAFDAFAMGNYPYPSTYIIGDPDHPLPAWPMRAACNHLA 444          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: A0A5D6XPD9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPD9_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.590e-57
Identity = 124/293 (42.32%), Postives = 158/293 (53.92%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDIGR-EFLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRI 876
            GNEADV LYL  TGLMWENA  F A LVFAEHR++G+S+PFG       ++LST QALADYA LI+ L+  L  ++ PV+ FGGSYGGML +W R+KYPH++ G +AASAP++A  G  RP  D +SFA  VT  A PA G+   C  NVRRA+ A+ S                         G  K G   L  A                                     +CA      ++ +  L  W +SAFDY+AMGNYPYP+ YI+NG  V LPA+P+R AC ++
Sbjct:  126 GNEADVELYLNNTGLMWENAQDFGATLVFAEHRYFGKSVPFGKKVTKHMQYLSTEQALADYAELITYLKESLALDV-PVVGFGGSYGGMLGSWFRMKYPHIIDGVIAASAPIVAFLGDERPV-DMDSFARVVTFDASPAAGSAPNCVPNVRRAWTAMAS------------------------LGATKAGRAQLKDA-----------------------------------FALCASEKLSSDEDVAGLIDWAKSAFDYMAMGNYPYPSPYIMNGKSV-LPAYPVRAACEQL 356          
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Match: W7TPZ5_9STRA (Lysosomal pro-x n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPZ5_9STRA)

HSP 1 Score: 202 bits (513), Expect = 6.250e-57
Identity = 130/298 (43.62%), Postives = 163/298 (54.70%), Query Frame = 1
Query:    1 GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLP---FGAPDIGREFLSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHVVHGAVAASAPVLAME------GLRRPTPDPESFAATVTRAAGPAGGATEKCSANVRRAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAPDAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELAWWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREAC 867
            GNEADVTLYL A+GLMWENAP F ALLVFAEHR+YG+S P   F A  +  ++LS+ QALADYARLI  L+ EL +  +PVIAFGGSYGGMLA+W RL YPH+V GA+A SAPVL  E      G+       ESF+  VTR A P GG+   C+ NVR A+               P + D+A++    +                                             +    R+C G +   ED  L L W  +SA+ Y+AMGNYP+P+ Y+LNG G  LPAWP+R AC
Sbjct:  159 GNEADVTLYLNASGLMWENAPEFGALLVFAEHRYYGKSQPLQPFTAHKM--DYLSSEQALADYARLIIALKTELNSPDSPVIAFGGSYGGMLASWWRLLYPHLVSGAIAGSAPVLDFEPEVGEEGI-------ESFSYIVTRDASPEGGSNAYCADNVRAAW---------------PVIKDLAASVTGRQE--------------------------------------------LTERFRICQGALATAEDVDLLLGW-LQSAWAYMAMGNYPFPSTYVLNGRGT-LPAWPVRVAC 386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93742.16808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVR0_ECTSI2.380e-9153.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3FQQ3_9CHLO1.730e-6244.29Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A8J9R8Q3_9CHLO4.440e-6042.66Lysosomal Pro-X carboxypeptidase n=1 Tax=Coccomyxa... [more]
A0A2P6TKN8_CHLSO1.440e-5842.62Thioredoxin-dependent peroxiredoxin n=2 Tax=Chlore... [more]
A0A4D9D674_9STRA1.500e-5843.05Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1D2A5Y0_AUXPR7.760e-5842.37Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A087SS73_AUXPR1.260e-5742.37Lysosomal Pro-X carboxypeptidase n=1 Tax=Auxenochl... [more]
A0A8J4CH77_9CHLO3.300e-5742.03Uncharacterized protein n=5 Tax=Volvox reticulifer... [more]
A0A5D6XPD9_9STRA4.590e-5742.32Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W7TPZ5_9STRA6.250e-5743.62Lysosomal pro-x n=1 Tax=Nannochloropsis gaditana T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93742contigH-elongata_contig93742:288..2387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue1.7e-77
Seed eggNOG ortholog2880.D7FVR0
KEGG koko:K01285
KEGG Pathwayko04614,ko04974,map04614,map04974
EggNOG free text desc.dipeptidyl-peptidase activity
EggNOG OGsKOG2183@1,KOG2183@2759
EC3.4.16.2
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons3
Model size882
Cds size882
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93742.16808.1prot_H-elongata_contig93742.16808.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig93742 288..2387 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931333.7582076-CDS-H-elongata_contig93742:287..4421622931333.7582076-CDS-H-elongata_contig93742:287..442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93742 288..442 +
1691679794.0324483-CDS-H-elongata_contig93742:287..4421691679794.0324483-CDS-H-elongata_contig93742:287..442Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93742 288..442 +
1622931333.7771723-CDS-H-elongata_contig93742:736..8491622931333.7771723-CDS-H-elongata_contig93742:736..849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93742 737..849 +
1691679794.0459344-CDS-H-elongata_contig93742:736..8491691679794.0459344-CDS-H-elongata_contig93742:736..849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93742 737..849 +
1622931333.7921925-CDS-H-elongata_contig93742:1773..23871622931333.7921925-CDS-H-elongata_contig93742:1773..2387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93742 1774..2387 +
1691679794.0672073-CDS-H-elongata_contig93742:1773..23871691679794.0672073-CDS-H-elongata_contig93742:1773..2387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93742 1774..2387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig93742.16808.1

>prot_H-elongata_contig93742.16808.1 ID=prot_H-elongata_contig93742.16808.1|Name=mRNA_H-elongata_contig93742.16808.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=294bp
GNEADVTLYLGATGLMWENAPAFRALLVFAEHRFYGESLPFGAPDIGREF
LSTSQALADYARLISTLRRELEAEMAPVIAFGGSYGGMLAAWLRLKYPHV
VHGAVAASAPVLAMEGLRRPTPDPESFAATVTRAAGPAGGATEKCSANVR
RAFNAILSGAGAAGSRSAPEVTDVASTAADAERGRGKPGLRALGSAGEAP
DAIPDVDIFEPDSADADAEEAEAAVDRVARLLRVCAGRIPKGEDALLELA
WWTRSAFDYLAMGNYPYPTGYILNGGGVELPAWPLREACSRISD
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mRNA from alignment at H-elongata_contig93742:288..2387+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig93742.16808.1 ID=mRNA_H-elongata_contig93742.16808.1|Name=mRNA_H-elongata_contig93742.16808.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2100bp|location=Sequence derived from alignment at H-elongata_contig93742:288..2387+ (Himanthalia elongata Himel1 dioecious)
GGTAACGAGGCGGATGTGACGCTCTATCTGGGGGCCACAGGCCTCATGTG GGAAAACGCTCCCGCATTCCGCGCCCTGCTCGTGTTTGCCGAGCACAGGT TCTACGGAGAGTCTCTCCCTTTCGGCGCGCCCGACATAGGGAGGGAGTTC CTCAGGTGTGTGTGAGAGCTTCGCGTTTGGGGGAAACGGGCGGGCGGAAA GGAGCAAGCAAAAATGTGACCCACGGCGTGAGCCGAGGCAAAAGGAAGAG AAGCTTTGGGTTCGAAGCAACGGCCGGAGCATGCGCTTGTCGAGGTATCG GTAAACAAGCGGGTTGGTCAGACAAATATAATTTTTTGGTGTCTGTATTC GCTGGCTGTTTCTCTTTCTCTTTCTCTGCCATAGTCTTTCTCTCTCTCTC TCTCTCTCCCTAATATCTCCTTCCTCTTTTCTTCCTCCGCTGTACCCAGC ACGTCTCAAGCGCTCGCGGACTACGCTCGACTCATCTCGACGCTGCGCCG AGAACTGGAAGCCGAGATGGCGCCCGTAATCGCCTTTGGAGGAAGTTACG GTGGAATGCTCGGTAAGTGTTCCGTGTCGTGATGGAGGCGGGGGTGGAAA CGCATGAAACTCGCGCACCCGCACAATCTTGGTCATCGATCGGGGTACCC CTCCCCCTCCCCTCGCAGAGTGATATACCGTTTTGCCCTTGTCTAGTGCG AGTGTGACGGGGAGAATCAAGGGTGTTGGAAGCGAGGGCGTTCGGGGAGG ACACCTAGCCTAGTCTAGCCAAAACCTTTGGACCCGGATAATTTCCCTTC GTTATCTTTCGCTTTCGTGCAAAAATAAAATAATAAGTACACAATATATT ACGAATGTACAAAAATATACGGTATACGGTATATAATTAAAAAAATAACG TGGGATTTTACTGCTTCCACGAAGAAGGAAGAAAAATACAAAATAATATG TAGACTTAACATAAAAATAATACGTATACAAGTACCTAGATCTTGGTATA TACCCGAAGCACCGTTGGTTGCTGTTTTTGAATAGTGTTCTCAAGGAAAA CATTGTTTATACGACACGCATGAGCCCAATGTGGTCCCTACTAGAAATAT GTAAGCGTGTCCAGCGTGCCTGACGAGGGCGTCGTTGTGTCCAGGGATCA GGGGGGAGTGGTAGAGGTATGTATTCGCCGCTGAGAGGGAGATGTCGATC ACAAAGTATATATACGTTGTTCATTGCCCGGGAGTTCCAGAGAAACGAGG CGTCCTCCCGAACTTCATTTTTGCAGTTGGCCCCGGTAAATCATATCTTT GGTAATAACGCATTCGAAGAGCCAAAAGCATACATACGCTCTTTGGTTTC AAAACTTCGAAAAGGATAAAATATACATCCGTCCTTCTATTCCCTTACTA TCGATACAATGATCTAATATCTAAGGCATACAAAGCTAAAATACGCCCTC CCTCCGCCCCCGCCCCCCCTCCAACCCTGCTCACAGCGGCATGGCTCAGG CTCAAGTACCCCCACGTAGTACACGGTGCGGTAGCCGCCTCGGCTCCAGT CCTCGCCATGGAGGGCCTCCGCCGACCCACCCCGGACCCGGAATCCTTCG CGGCAACCGTCACGCGCGCGGCGGGGCCGGCCGGTGGCGCCACAGAGAAA TGTTCCGCGAACGTTCGCCGGGCGTTCAATGCGATTCTCTCGGGAGCCGG AGCCGCAGGCTCGCGCAGTGCCCCCGAAGTAACCGATGTCGCTTCAACCG CTGCTGACGCTGAGAGGGGACGAGGAAAACCAGGACTGCGCGCGCTAGGC AGCGCCGGCGAAGCTCCCGACGCGATCCCCGACGTCGATATCTTTGAACC GGACTCCGCAGATGCAGATGCGGAGGAGGCGGAGGCGGCAGTCGATCGCG TGGCGCGATTGCTGCGCGTGTGTGCCGGTCGGATACCCAAGGGAGAAGAC GCCCTCTTGGAGCTAGCGTGGTGGACGCGATCCGCGTTTGATTACCTGGC GATGGGGAACTACCCGTATCCGACGGGGTACATCCTGAACGGGGGGGGCG TGGAGCTTCCCGCTTGGCCCCTCAGGGAGGCGTGCTCTCGAATTTCTGAC
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Coding sequence (CDS) from alignment at H-elongata_contig93742:288..2387+

>mRNA_H-elongata_contig93742.16808.1 ID=mRNA_H-elongata_contig93742.16808.1|Name=mRNA_H-elongata_contig93742.16808.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1764bp|location=Sequence derived from alignment at H-elongata_contig93742:288..2387+ (Himanthalia elongata Himel1 dioecious)
GGTAACGAGGCGGATGTGACGCTCTATCTGGGGGCCACAGGCCTCATGTG
GGAAAACGCTCCCGCATTCCGCGCCCTGCTCGTGTTTGCCGAGCACAGGT
TCTACGGAGAGTCTCTCCCTTTCGGCGCGCCCGACATAGGGAGGGAGTTC
CTCAGGGTAACGAGGCGGATGTGACGCTCTATCTGGGGGCCACAGGCCTC
ATGTGGGAAAACGCTCCCGCATTCCGCGCCCTGCTCGTGTTTGCCGAGCA
CAGGTTCTACGGAGAGTCTCTCCCTTTCGGCGCGCCCGACATAGGGAGGG
AGTTCCTCAGCACGTCTCAAGCGCTCGCGGACTACGCTCGACTCATCTCG
ACGCTGCGCCGAGAACTGGAAGCCGAGATGGCGCCCGTAATCGCCTTTGG
AGGAAGTTACGGTGGAATGCTCGCACGTCTCAAGCGCTCGCGGACTACGC
TCGACTCATCTCGACGCTGCGCCGAGAACTGGAAGCCGAGATGGCGCCCG
TAATCGCCTTTGGAGGAAGTTACGGTGGAATGCTCGCGGCATGGCTCAGG
CTCAAGTACCCCCACGTAGTACACGGTGCGGTAGCCGCCTCGGCTCCAGT
CCTCGCCATGGAGGGCCTCCGCCGACCCACCCCGGACCCGGAATCCTTCG
CGGCAACCGTCACGCGCGCGGCGGGGCCGGCCGGTGGCGCCACAGAGAAA
TGTTCCGCGAACGTTCGCCGGGCGTTCAATGCGATTCTCTCGGGAGCCGG
AGCCGCAGGCTCGCGCAGTGCCCCCGAAGTAACCGATGTCGCTTCAACCG
CTGCTGACGCTGAGAGGGGACGAGGAAAACCAGGACTGCGCGCGCTAGGC
AGCGCCGGCGAAGCTCCCGACGCGATCCCCGACGTCGATATCTTTGAACC
GGACTCCGCAGATGCAGATGCGGAGGAGGCGGAGGCGGCAGTCGATCGCG
TGGCGCGATTGCTGCGCGTGTGTGCCGGTCGGATACCCAAGGGAGAAGAC
GCCCTCTTGGAGCTAGCGTGGTGGACGCGATCCGCGTTTGATTACCTGGC
GATGGGGAACTACCCGTATCCGACGGGGTACATCCTGAACGGGGGGGGCG
TGGAGCTTCCCGCTTGGCCCCTCAGGGAGGCGTGCTCTCGAATTTCTGAC
CGGCATGGCTCAGGCTCAAGTACCCCCACGTAGTACACGGTGCGGTAGCC
GCCTCGGCTCCAGTCCTCGCCATGGAGGGCCTCCGCCGACCCACCCCGGA
CCCGGAATCCTTCGCGGCAACCGTCACGCGCGCGGCGGGGCCGGCCGGTG
GCGCCACAGAGAAATGTTCCGCGAACGTTCGCCGGGCGTTCAATGCGATT
CTCTCGGGAGCCGGAGCCGCAGGCTCGCGCAGTGCCCCCGAAGTAACCGA
TGTCGCTTCAACCGCTGCTGACGCTGAGAGGGGACGAGGAAAACCAGGAC
TGCGCGCGCTAGGCAGCGCCGGCGAAGCTCCCGACGCGATCCCCGACGTC
GATATCTTTGAACCGGACTCCGCAGATGCAGATGCGGAGGAGGCGGAGGC
GGCAGTCGATCGCGTGGCGCGATTGCTGCGCGTGTGTGCCGGTCGGATAC
CCAAGGGAGAAGACGCCCTCTTGGAGCTAGCGTGGTGGACGCGATCCGCG
TTTGATTACCTGGCGATGGGGAACTACCCGTATCCGACGGGGTACATCCT
GAACGGGGGGGGCGTGGAGCTTCCCGCTTGGCCCCTCAGGGAGGCGTGCT
CTCGAATTTCTGAC
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