prot_H-elongata_contig9372.16806.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9372.16806.1
Unique Nameprot_H-elongata_contig9372.16806.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length545
Homology
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BLAST of mRNA_H-elongata_contig9372.16806.1 vs. uniprot
Match: D7FQA7_ECTSI (Hypothetical leucine rich repeat and MORN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQA7_ECTSI)

HSP 1 Score: 439 bits (1129), Expect = 1.430e-133
Identity = 252/503 (50.10%), Postives = 305/503 (60.64%), Query Frame = 0 
Query:   45 RYDAANVIGKAYRKHYKRREIAARKLQSITRRCIAQREGSRLAREKCCTIAIQCAYRSRKARLVAAYKRVIRQAYYSVRGRGRVDSGCSDPLYGHENCVVLDPSEESTLWCSPHGEVQGQWITFDLGKDYPVGALRLLAMSNTT------LECCKTEKQTKGKAWTLAGSFRVANQAGWQQFEIPRMLDGSTISRRWKVTFASNYGNTTAVAVHGIQFLLAKEESPRVLSQSHSTVVTPPPVGKEHWAFSLSVEGTAWPPHRYQWYKNNRLIQGER-GPKLEISISSPATQECRAFRCIHCKHEKEEVPRNAMRVICGRCETPFAFKEYRDSCTSRTAWEQEVTVLESAVKEAEGVADKALIDRDKACLEAFLCEGKDKVNLVVVKDNFERKEAVLVEVRERLDAARKAVNKKYKELLETASTDPLKVEHDFEGVYECRLSNIRGGSIIRMVSSYSIYVFARDPPPLRLKARLYIYVPRKKLRRRYWPKYAWAFGWFVNGKIG 540
            R +   V  KA R++++ R    R LQ++TRR  A+R G  LA+EK C IA+QCAYRSRKARL AAYKRVIR        + R  SGCSDPLY   NCVVLDPS+E TLW SP+GEV+ QWITFDLG DYPVGA+RLLAM+NTT      +ECCKT+KQ +   WTL GSFR  N + WQQFEIPR LD   I+RRWKVTF SN+GNTTAVAV+G+Q                      P V K                         R   GER  PK                      H     P + M  +        A +EY ++  +R+AWE  VT LE+ V+EAE   D+A+ D +KA LE  LCE + K   +V K +   K     +  E L AAR+AVN K++ELL+ A  DPLK+ HDFEG+YECRLSNIRGG+I+R VSSY IYVFARDPPPLRLK +  +YVP++KLRRRYWPKYAWAFGWF +GKIG
Sbjct: 2374 REEREAVFKKATRQYFRVRSSLTRVLQTLTRRRFARRRGDYLAKEKRCVIAVQCAYRSRKARLAAAYKRVIRTV------KVRDSSGCSDPLYEARNCVVLDPSDEGTLWSSPYGEVKDQWITFDLGGDYPVGAIRLLAMANTTGPKLLRIECCKTKKQVRAGEWTLVGSFRAENTSVWQQFEIPRRLDAVNITRRWKVTFVSNFGNTTAVAVNGVQV---------------------PVVSK-------------------------RTAAGERDAPKAG--------------------HSPPHAPDDGMSPL--PMHPLQARREYEETFAARSAWEGVVTALEADVREAEVANDEAIADLEKARLEVTLCEAESKEKFIVAKADLTAKTIAQRDSDELLKAAREAVNNKHRELLKAARDDPLKIRHDFEGLYECRLSNIRGGTILRTVSSYGIYVFARDPPPLRLKVQA-LYVPKEKLRRRYWPKYAWAFGWFTHGKIG 2801
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9372.16806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQA7_ECTSI1.430e-13350.10Hypothetical leucine rich repeat and MORN domain-c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 426..457
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 144..261
e-value: 4.5E-9
score: 38.5
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 150..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9372contigH-elongata_contig9372:3255..8535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9372.16806.1mRNA_H-elongata_contig9372.16806.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9372 3255..8535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9372.16806.1 ID=prot_H-elongata_contig9372.16806.1|Name=mRNA_H-elongata_contig9372.16806.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=545bp
TRCYRGYLELDSVPADRTVGRRIITMQCLVRMWLAARNLKARRRRYDAAN
VIGKAYRKHYKRREIAARKLQSITRRCIAQREGSRLAREKCCTIAIQCAY
RSRKARLVAAYKRVIRQAYYSVRGRGRVDSGCSDPLYGHENCVVLDPSEE
STLWCSPHGEVQGQWITFDLGKDYPVGALRLLAMSNTTLECCKTEKQTKG
KAWTLAGSFRVANQAGWQQFEIPRMLDGSTISRRWKVTFASNYGNTTAVA
VHGIQFLLAKEESPRVLSQSHSTVVTPPPVGKEHWAFSLSVEGTAWPPHR
YQWYKNNRLIQGERGPKLEISISSPATQECRAFRCIHCKHEKEEVPRNAM
RVICGRCETPFAFKEYRDSCTSRTAWEQEVTVLESAVKEAEGVADKALID
RDKACLEAFLCEGKDKVNLVVVKDNFERKEAVLVEVRERLDAARKAVNKK
YKELLETASTDPLKVEHDFEGVYECRLSNIRGGSIIRMVSSYSIYVFARD
PPPLRLKARLYIYVPRKKLRRRYWPKYAWAFGWFVNGKIGEQRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf