mRNA_H-elongata_contig93707.16805.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: D8LHC7_ECTSI (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC7_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.010e-34 Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 1
Query: 1 LPTSILATMKTPQVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
L S+L ++ VGTPFSFSFFSTLHGG SIAAHTAPCNLRLRCHLPL VPS+DP +CGMRVGGEIRPWEEG
Sbjct: 85 LTASLLDSVADHMVGTPFSFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSADPSQCGMRVGGEIRPWEEG 157
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A836CPE8_9STRA (Putative aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE8_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.180e-22 Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 13 ILATMKTPQVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
+L ++ GTP S+SFFSTLH +IA HTA CNLRLRCH PLIVPS++ ++CG+RVG E+R WEEG
Sbjct: 119 LLDATESHMTGTPMSYSFFSTLHPRSAIAPHTAACNLRLRCHFPLIVPSTNADECGIRVGDEVRAWEEG 187
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A7S2WWP7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWP7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.200e-20 Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 37 QVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
GTPFSFSFFSTLH SIA H+APCNLRLR H+PL VPS D +CG RV + PW+EG
Sbjct: 177 MTGTPFSFSFFSTLHSHSSIAPHSAPCNLRLRLHVPLTVPSEDANECGFRVADHVAPWKEG 237
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A7S3XA75_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3XA75_9SPIT) HSP 1 Score: 88.2 bits (217), Expect = 7.790e-20 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 4 PTSILATMKTPQV---GTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
P + A + P++ PF+F+FFSTL GG IA H +PCNLR+R HLPLIVP DPE CGM+V GE R WEEG
Sbjct: 97 PMTASALLSVPRLCVDSMPFAFTFFSTLRGGSHIAPHCSPCNLRIRVHLPLIVP--DPEACGMKVAGETRRWEEG 169
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A7S3MFY7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFY7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.900e-19 Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 16 LATMKTPQV--GTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEGTP 225
L ++ +P + GTPFSF+FFSTLH +IA H PCNLR+RCH PLIVP S KCGM+VG + WEEG P
Sbjct: 115 LESLDSPTLMRGTPFSFAFFSTLHPHSTIAPHYGPCNLRIRCHFPLIVPKSG--KCGMQVGDKTVTWEEGKP 184
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: W2RER7_PHYPN (Asp_Arg_Hydrox domain-containing protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RER7_PHYPN) HSP 1 Score: 80.9 bits (198), Expect = 3.810e-17 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 37 QVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
G PF++SFFS L SI AH+APCN+RLRCH PLIVP E CG+RVG E R WEEG
Sbjct: 130 MAGLPFAYSFFSILKPESSIKAHSAPCNIRLRCHFPLIVP----EGCGIRVGDETRQWEEG 186
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A7R9YNQ3_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNQ3_DIALT) HSP 1 Score: 79.0 bits (193), Expect = 3.860e-17 Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 49 PFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
PF F+FFSTLH G +I HTAPCNLRLRCHLPL VP D C M + G +PW EG
Sbjct: 33 PFGFAFFSTLHPGSTIEPHTAPCNLRLRCHLPLRVPPGD--GCAMELAGARQPWAEG 87
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A6A3EN18_9STRA (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EN18_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.340e-17 Identity = 39/69 (56.52%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 13 ILATMKTPQVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
IL ++ G PF++SFFS L SI AH+APCN+RLRCH PL VP E CG+RVG E R WEEG
Sbjct: 118 ILESIPGFMAGLPFAYSFFSVLKPESSIKAHSAPCNIRLRCHFPLFVP----EGCGIRVGDETRQWEEG 182
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A6G0KLC7_9STRA (Asp_Arg_Hydrox domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6G0KLC7_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.340e-17 Identity = 39/69 (56.52%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 13 ILATMKTPQVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
IL ++ G PF++SFFS L SI AH+APCN+RLRCH PL VP E CG+RVG E R WEEG
Sbjct: 118 ILESIPGFMAGLPFAYSFFSVLKPESSIKAHSAPCNIRLRCHFPLFVP----EGCGIRVGDETRQWEEG 182
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Match: A0A3R7K0G3_9STRA (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0G3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 7.170e-17 Identity = 38/69 (55.07%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 13 ILATMKTPQVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKCGMRVGGEIRPWEEG 219
IL ++ G PF+++FFS L SI AH+APCN+RLRCH PL VP E CG+RVG E R WEEG
Sbjct: 49 ILESIPGFMTGLPFAYAFFSVLKPESSIKAHSAPCNIRLRCHFPLFVP----EGCGIRVGDETRQWEEG 113 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93707.16805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig93707.16805.1 >prot_H-elongata_contig93707.16805.1 ID=prot_H-elongata_contig93707.16805.1|Name=mRNA_H-elongata_contig93707.16805.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp MKTPQVGTPFSFSFFSTLHGGGSIAAHTAPCNLRLRCHLPLIVPSSDPEKback to top mRNA from alignment at H-elongata_contig93707:2192..2416- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig93707.16805.1 ID=mRNA_H-elongata_contig93707.16805.1|Name=mRNA_H-elongata_contig93707.16805.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=225bp|location=Sequence derived from alignment at H-elongata_contig93707:2192..2416- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig93707:2192..2416- >mRNA_H-elongata_contig93707.16805.1 ID=mRNA_H-elongata_contig93707.16805.1|Name=mRNA_H-elongata_contig93707.16805.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=402bp|location=Sequence derived from alignment at H-elongata_contig93707:2192..2416- (Himanthalia elongata Himel1 dioecious)back to top |