prot_H-elongata_contig937.16803.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig937.16803.1
Unique Nameprot_H-elongata_contig937.16803.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length577
Homology
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: D7FRX8_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX8_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 3.050e-54
Identity = 92/157 (58.60%), Postives = 110/157 (70.06%), Query Frame = 0
Query:    1 GHLIRISKEAIMYGAADLPLTSADYEIWGKGLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIED--CQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALC 155
            GHLIRI  EA MY + DLPLT  DY++W KGLRNPFRLD+D  T DIY+ DVGD+T EEI++LRNPL+ + SSLPAN GWPCVEG  IPL TYNWITQ+C+   ++  C IC  +F C  +   GD   CD AY+ P F Y H G LT+YD Q   C
Sbjct:  190 GHLIRIHAEATMYDSEDLPLTELDYDVWAKGLRNPFRLDIDRQTGDIYLGDVGDSTAEEINILRNPLDAAASSLPANLGWPCVEGGGIPLPTYNWITQSCDVNDDNNNCDICKAIFACTAE-ALGDVDLCDPAYVPPSFQYDHAGSLTTYDGQEDRC 345          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: UPI001F55C104 (PQQ-dependent sugar dehydrogenase n=1 Tax=Actinomadura sp. ATCC 31491 TaxID=2917990 RepID=UPI001F55C104)

HSP 1 Score: 88.6 bits (218), Expect = 1.350e-14
Identity = 73/245 (29.80%), Postives = 110/245 (44.90%), Query Frame = 0
Query:    1 GHLIRISKEAIMYGAADLPLTSAD---YEIWGKGLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAF----------FEGRLYAADYSKKCLWFFEADENSDPDFDKPVIIAEESGADIVDLVDGGDGYLYGTNFALSKLIR 232
            G LIRI+ +     A +    S D     I   GLRNPFRL V   T ++++A+VG  + EEI+ + +P     ++  +NFGWPC EG        N           D  +C+ L+           A   SA++ P F ++H  +    D     C   G+S S VAF          ++G L+ +DYS++C+W      N  PD     I   +SG   V+LV G  G L+  ++    L+R
Sbjct:  257 GTLIRINPDTGAAAAGNPNAASPDPGTARIIAHGLRNPFRLTVRPGTSELWLAEVGWNSFEEINRVVSP-----TAPVSNFGWPCYEGSGRQGGYDNL----------DLTLCETLY-----------AAGASAHVTPYFAWNHNSRPAPNDP----CPSGGSSASGVAFHGTGGAYPAAYDGALFLSDYSRQCVWVMTKGANGLPD--PATIQTFDSGMPAVELVTGPGGDLFAVDYDHGTLVR 469          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: A0A4R2HQ77_9ACTN (Glucose/arabinose dehydrogenase n=2 Tax=Kribbella sp. VKM Ac-2572 TaxID=2512223 RepID=A0A4R2HQ77_9ACTN)

HSP 1 Score: 83.6 bits (205), Expect = 5.230e-13
Identity = 70/251 (27.89%), Postives = 113/251 (45.02%), Query Frame = 0
Query:    1 GHLIRISKEAIMYGAADLPLTSADYE---IWGKGLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAFFE---------GRLYAADYSKKCLWFFEADENSDPDFDKPVIIAEESGADIVDLVDGGDGYLYGTNFALSKLIRIEPVGLN 239
            G +IRI+    +    +  L+S+D     I   GLRNP R D    T ++++ DVG +  EEI+ + +P     ++   NFGWPC EG       Y+           D  IC+ L+           A   SA  +P + Y H+ ++ +    G  C    +S++ ++F+E         G L+ ADYS+KC+W    D N  PD D+ V  A   G   +    GGD  ++  ++   +++R    G N
Sbjct:  287 GSIIRINPNTGLAAPNNPLLSSSDLNARRIVAHGLRNPMRFDFRPGTNELWVGDVGWSAWEEINRIVSP-----TAGVTNFGWPCYEG-AGRQGGYDG---------NDLSICENLY-----------AAGPSAVASPYYAYKHSDQVVA----GESCGTGSSSLTGMSFYEEGNYPPEYDGALFFADYSRKCVWAMLPDANGLPDPDEIVTFASGYGTTRLQTGPGGD--IFAVDYDNGRVMRYVYNGTN 505          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: UPI001CD953DA (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Wangella sp. NEAU-J3 TaxID=2878561 RepID=UPI001CD953DA)

HSP 1 Score: 82.0 bits (201), Expect = 1.600e-12
Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 0
Query:    1 GHLIRISKEAIMYGAADLPLTSADY------EIWGKGLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAFFE-----------GRLYAADYSKKCLWFFEADE-NSDPDFDKPVIIAEESGADIVDLVDGGDGYL 220
            G L+R+  E    GAA     +AD        I   GLRNPFR D+   T ++++ADVG  T EEI+V+ +P   +      NFGWPC EG   P + Y+           +  +C+ L+T        DG + D     P + + HT K+      G  C   G++ S VAF+            G  + ADY++ C+W    D     PD D     A    A  VDL  G DG L
Sbjct:  256 GALLRLDPET---GAAATDNPAADSTDPNTRRIVAYGLRNPFRFDIRPGTDEVWLADVGWNTAEEINVVTDPTRTT------NFGWPCYEGP-DPQAGYDGA---------NLDLCESLYT--------DGGQTD-----PFYHFRHTDKVVP----GEPCPSGGSAWSGVAFYPAGGGAYPAEYGGAAFLADYTRNCIWAMLPDSPGGAPDPDNLRTFAAAP-AHPVDLAIGPDGDL 456          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: A0A8J3W955_9ACTN (PKD domain-containing protein n=1 Tax=Planobispora longispora TaxID=28887 RepID=A0A8J3W955_9ACTN)

HSP 1 Score: 81.6 bits (200), Expect = 2.030e-12
Identity = 64/212 (30.19%), Postives = 96/212 (45.28%), Query Frame = 0
Query:   31 GLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAFF---------EGRLYAADYSKKCLWFFEADENSDPDFDKPVIIAE-ESGADIVDLVDGGDGYLYGTNFALSKLIR 232
            GLRNPFR+ +   T ++++AD G  T EEI  + +P     +   ANFGWPC EG       Y+ +  T         +C+ L      Y  G GA      + P F+Y H  K+    D    C   G+S S +AF+         +G ++ +DYS+ C+W      N  PD   P  +A  +S    V+L  G  G L+  + +   L+R
Sbjct:  294 GLRNPFRITLRPGTNELWVADTGWNTYEEIDRITSP-----TGPVANFGWPCYEGPNRQAG-YDNLNLT---------LCENL------YAAGTGAR-----VQPYFSYLHANKVAGPGDP---CPSGGSSPSGIAFYPGGSYPDSYDGAMFFSDYSRSCVWVMTRGSNGLPD---PATVANVDSSVGPVELETGPGGDLFMLDISNGALVR 473          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: A0A4R4WZZ2_9ACTN (PKD domain-containing protein n=1 Tax=Kribbella turkmenica TaxID=2530375 RepID=A0A4R4WZZ2_9ACTN)

HSP 1 Score: 81.6 bits (200), Expect = 2.070e-12
Identity = 69/251 (27.49%), Postives = 110/251 (43.82%), Query Frame = 0
Query:    1 GHLIRISKEAIMYGAADLPLTSADYE---IWGKGLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAFFE---------GRLYAADYSKKCLWFFEADENSDPDFDKPVIIAEESGADIVDLVDGGDGYLYGTNFALSKLIRIEPVGLN 239
            G +IR+  +  +    +  L+S D     I   GLRNP R D    T +++I DVG +  EEI+ + +P     ++   NFGWPC EG+      Y+ I         D  IC+ L+    D           A  +P F Y  + ++ +    G  C    +S+S ++F+E         G L+ ADYS+KC+W      N  P   + V  A  +G   +    GGD  ++  ++   +L+R    G N
Sbjct:  262 GSIIRVHPDTGLAAPGNPLLSSPDLNARRIVAHGLRNPMRFDFRPGTSELWIGDVGWSASEEINRIVSP-----TAGVTNFGWPCYEGNARQ-GGYDGI---------DLNICENLYAAGPD-----------AVASPYFAYKRSEQVVA----GESCGTGSSSLSGMSFYEEGNYPPEYDGALFFADYSRKCIWAMLPGGNGLPSASELVTFASGNGTTRLQTGPGGD--IFAVDYDNGRLLRYVYNGTN 480          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: UPI0003AAE370 (PQQ-dependent sugar dehydrogenase n=1 Tax=Kribbella catacumbae TaxID=460086 RepID=UPI0003AAE370)

HSP 1 Score: 80.5 bits (197), Expect = 4.770e-12
Identity = 76/248 (30.65%), Postives = 105/248 (42.34%), Query Frame = 0
Query:    1 GHLIRISKEA-------IMYGAADLPLTSADYEIWGKGLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAFF---------EGRLYAADYSKKCLWFFEADENSDPDFDKPVIIAEESGADIVDLVDGGDGYLYGTNFALSKLIR 232
            G LIRI  +          YG+ D P T     I   GLRNP R      T +I+I DVG    EEI  + +P     ++   NFGWPC EG     S Y+           D  +C+ L      Y  G GA       AP F Y H  K+ +    G  CS   +SI+ +AF+         +G L+ ADYS+KC+W      N  P+    V  A   G   +    GGD  ++  ++   +L+R
Sbjct:  268 GSLIRIDPDTGYAAPGNPQYGSTD-PNTR---RIVSHGLRNPMRFAFRPGTNEIWIGDVGWNAWEEIDRVVSP-----TAGVTNFGWPCYEG-TGRQSGYDGA---------DLTLCENL------YAAGSGA-----VAAPFFAYQHDAKVVA----GESCSSGSSSIAGLAFYPDGNYPAAYDGALFFADYSRKCVWAMRPGANGLPNPSDIVTFASGYGTTALQAGPGGD--IFAVDYDNGRLVR 479          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: A0A2L0ETK1_SORCE (PKD domain-containing protein n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0ETK1_SORCE)

HSP 1 Score: 79.0 bits (193), Expect = 1.400e-11
Identity = 68/232 (29.31%), Postives = 101/232 (43.53%), Query Frame = 0
Query:   17 DLPLTS----ADYEIWGKGLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTCEPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDD--QGALCSDAGNSISAVAF---------FEGRLYAADYSKKCLWFFEADENSDPDFDKPVIIAEESGADIVDLVDGGDGYLYGTNFALSKLIRI 233
            D PL S     D  I   GLRNPFR+     T +++IADVG    EE++ + +P     +S   NFGWPC EG               +       +C  L+        GD     S    P +TY H      +DD  +G  C    +S++ VAF         ++G L+ AD S++C+W   A     PD  +  +  +++   +VDL  G DG LY  +F    + R+
Sbjct:  307 DNPLASNGVPGDDFIIAMGLRNPFRIAARPGTDEVWIADVGWNVWEELNRIESP-----TSSVKNFGWPCFEGTGE------------QGGYASRALCQRLYA-------GDYPSILSLQ-EPYYTYPH------WDDVVEGDGCGTGSSSVTGVAFNTSAAFPEAYDGALFFADSSRRCVWTLFAGAGGHPDPSRRAVFVKKTSGRVVDLQMGPDGKLYYVDFDGGNIYRV 507          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: A0A534KAY2_9EURY (PA14 domain-containing protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534KAY2_9EURY)

HSP 1 Score: 77.4 bits (189), Expect = 3.300e-11
Identity = 69/219 (31.51%), Postives = 97/219 (44.29%), Query Frame = 0
Query:   31 GLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPA-NFGWPCVEGDVIPLSTYNWITQTCEPAIE--DCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAFF---------EGRLYAADYSKKCLWFFEADENSDPDFDKPVIIAEESGADIVDLVDGGDGYLYGTNFALSKLIRIEPVG 237
            GLRNPFR  +   T ++++ADVG  T EEI  +      S ++LP  NFGWPC EG               +P  +  +  IC+ L      Y  G GA        P +TY H+ K+      G  C   G+S + +AF+          G L+ ADYS+ C+W   A  N  PD +  V     + A  V+L  G  G L+  +F    + RI   G
Sbjct:  301 GLRNPFRFTIRPGTSEVWVADVGWDTWEEIDRIL-----SSANLPIENFGWPCYEGTGR------------QPGYDGANLDICENL------YAAGAGA-----VNPPYYTYAHSAKVVP----GESCPTGGSSTTGLAFYTGGSYPSTYNGSLFFADYSRNCIWAMLAGSNGLPDPNNIVTFVAPAAAP-VELQIGPGGDLFYVDFNGGTIRRITFAG 486          
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Match: A0A534KMF3_9EURY (PA14 domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534KMF3_9EURY)

HSP 1 Score: 77.4 bits (189), Expect = 4.660e-11
Identity = 69/219 (31.51%), Postives = 97/219 (44.29%), Query Frame = 0
Query:   31 GLRNPFRLDVDTDTWDIYIADVGDTTVEEISVLRNPLEESGSSLPA-NFGWPCVEGDVIPLSTYNWITQTCEPAIE--DCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDDQGALCSDAGNSISAVAFF---------EGRLYAADYSKKCLWFFEADENSDPDFDKPVIIAEESGADIVDLVDGGDGYLYGTNFALSKLIRIEPVG 237
            GLRNPFR  +   T ++++ADVG  T EEI  +      S ++LP  NFGWPC EG               +P  +  +  IC+ L      Y  G GA        P +TY H+ K+      G  C   G+S + +AF+          G L+ ADYS+ C+W   A  N  PD +  V     + A  V+L  G  G L+  +F    + RI   G
Sbjct:  301 GLRNPFRFTIRPGTSEVWVADVGWDTWEEIDRIL-----SSANLPIENFGWPCYEGTGR------------QPGYDGANLDICENL------YAAGAGA-----VNPPYYTYAHSAKVVP----GESCPTGGSSTTGLAFYTGGSYPTTYNGSLFFADYSRNCIWAMLAGSNGLPDPNNIVTFVAPAAAP-VELQIGPGGDLFYVDFNGGTIRRITFAG 486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig937.16803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRX8_ECTSI3.050e-5458.60GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI001F55C1041.350e-1429.80PQQ-dependent sugar dehydrogenase n=1 Tax=Actinoma... [more]
A0A4R2HQ77_9ACTN5.230e-1327.89Glucose/arabinose dehydrogenase n=2 Tax=Kribbella ... [more]
UPI001CD953DA1.600e-1231.51SMP-30/gluconolactonase/LRE family protein n=1 Tax... [more]
A0A8J3W955_9ACTN2.030e-1230.19PKD domain-containing protein n=1 Tax=Planobispora... [more]
A0A4R4WZZ2_9ACTN2.070e-1227.49PKD domain-containing protein n=1 Tax=Kribbella tu... [more]
UPI0003AAE3704.770e-1230.65PQQ-dependent sugar dehydrogenase n=1 Tax=Kribbell... [more]
A0A2L0ETK1_SORCE1.400e-1129.31PKD domain-containing protein n=2 Tax=Sorangium ce... [more]
A0A534KAY2_9EURY3.300e-1131.51PA14 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A534KMF3_9EURY4.660e-1131.51PA14 domain-containing protein n=1 Tax=Euryarchaeo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 1..233
e-value: 9.2E-14
score: 53.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 335..422
e-value: 2.5E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR19328PQQ OXIDOREDUCTASE-RELATEDcoord: 1..262
NoneNo IPR availablePANTHERPTHR19328:SF13HIPL1 PROTEINcoord: 1..262
IPR035986PKD domain superfamilySUPERFAMILY49299PKD domaincoord: 341..418

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig937contigH-elongata_contig937:5395..17496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig937.16803.1mRNA_H-elongata_contig937.16803.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig937 5395..17496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig937.16803.1 ID=prot_H-elongata_contig937.16803.1|Name=mRNA_H-elongata_contig937.16803.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=577bp
GHLIRISKEAIMYGAADLPLTSADYEIWGKGLRNPFRLDVDTDTWDIYIA
DVGDTTVEEISVLRNPLEESGSSLPANFGWPCVEGDVIPLSTYNWITQTC
EPAIEDCQICDGLFTCIEDYGGGDGAECDSAYIAPGFTYHHTGKLTSYDD
QGALCSDAGNSISAVAFFEGRLYAADYSKKCLWFFEADENSDPDFDKPVI
IAEESGADIVDLVDGGDGYLYGTNFALSKLIRIEPVGLNALERSANASSS
SSSVTWKSYSSTRRSAGGNTTSVIIGTSSPTWPTTISSTTAFENITPSPV
TLVQGTLTPASSQSTPDPTPLLELKGLVDGEEEYCLTSCELAVGTAVTFT
VLLSENYGDNDTEYSIIFGDGGSKYYSGPKGAGHRHTYESAGVFYAQVNA
TSTDDLSNSDALTIVVGEPFTLVMIPRSGEWMVGDTIAFNLTRAATSAVP
NEITWTSTIEHCVTDMCTGKIGCHLHSLSQVNTAPDGMSGSVVPVAHELP
SQVILTVRLTFDQETVLDYEWPTSSKTHTVEVTSRPAGLTIYYGDKTCQY
TPCTASFMANSSAYFAADTIQSVDMKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like
IPR013783Ig-like_fold
IPR035986PKD_dom_sf