mRNA_H-elongata_contig93677.16800.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A6H5KIE1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE1_9PHAE) HSP 1 Score: 216 bits (550), Expect = 7.230e-68 Identity = 102/146 (69.86%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 1 QIRKHGATVVKTLALKNFKRRSVMGTNGYMAPEMAKLIDETSE---KEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSWVRRRSLIALLGRQTEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFMTG 429
+IRKHG TV + L NFKRRS+MGT GYMAPEMAKL+++ SE + GYNEAVDWWSLG TVYKMLTG RPFDPP W R++S+IA+L RQTEFEKLQAEV+YP Y+S+ AV F+SALLRH V +RLG GP GKE IKSH FM G
Sbjct: 156 KIRKHGTTVKRRETLMNFKRRSIMGTKGYMAPEMAKLLNQASESNDQRQGYNEAVDWWSLGVTVYKMLTGARPFDPPPWARKQSVIAMLRRQTEFEKLQAEVEYPRYMSEAAVSFVSALLRHDVHERLGSGPNGKEGIKSHAFMAG 301
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: D7FP09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP09_ECTSI) HSP 1 Score: 217 bits (552), Expect = 1.380e-64 Identity = 98/143 (68.53%), Postives = 119/143 (83.22%), Query Frame = 1
Query: 1 QIRKHGATVVKTLALKNFKRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSWVRRRSLIALLGRQTEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFMTG 429
+IRKHG TV + L NFKRRS+MGT GYMAPEMAKL+++++++ GY+EAVDWWSLG TVYKMLTG RPFDPP W R++S++A+L RQTEFEKLQAEV+YP Y+S+ AV F+SALLRH V +RLG GP GKE IKSH FM G
Sbjct: 356 KIRKHGTTVKRRGTLMNFKRRSIMGTKGYMAPEMAKLLNQSNDQRQGYDEAVDWWSLGVTVYKMLTGARPFDPPPWARKQSVVAMLRRQTEFEKLQAEVEYPRYMSEAAVSFVSALLRHDVHERLGSGPNGKEGIKSHAFMAG 498
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A7S1U415_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U415_9STRA) HSP 1 Score: 103 bits (256), Expect = 8.220e-23 Identity = 52/128 (40.62%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 52 FKRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSW--VRRRSLIALLGRQTEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFMTG 429
++RRS+MGT GYMAPE+ L+ S ++ GY +AVD+WSLG TVYK+L GTRPFD S+ + S +Q E++ L + +P ++SD I L+ DRLG G + + H F G
Sbjct: 372 YRRRSIMGTRGYMAPEVLDLMSAVSARK-GYTQAVDFWSLGVTVYKLLCGTRPFDMSSYDVLLEYSSEQKQQKQAEYDNLLHRIYFPTFISDAGCELIIGLMALHPEDRLGSNAEGVDGLTQHAFFNG 498
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A7S3GQ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ14_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.050e-22 Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 1
Query: 16 GATVVKTLALKNFKRR-SVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSW---VRRRSLIALLGRQ----TEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFMTG 429
GA A KR+ S+MGT GYMAPEM ++ + S ++ GY AVDWWSLG T++K+LTG RPF ++ V + + L R+ E+ L E+ +P ++S A I LL + RLG GP G +D+++H F G
Sbjct: 329 GAEATAGTARPPLKRKLSIMGTFGYMAPEMVVMLSQASYEKTGYTCAVDWWSLGVTMFKLLTGYRPFTDDNFNTFVEMATTMNQLVREHCDSPEYAILFQEIPFPSFMSPKAKDLIGRLLDVNDKTRLGSGPNGGKDVRAHPFFDG 474
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: D8LEF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF7_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.710e-21 Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 55 KRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSWVRRRSLIALLGRQTEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFMTG 429
+RRS+MGT GYMAPEM L + VGY+ AVD+WSLG TV+K+LTG+RPFD RRR F++L + +P Y+ A IS LL ++RLG P +KSH + G
Sbjct: 356 RRRSIMGTQGYMAPEMVILPKQPRSVRVGYSNAVDYWSLGVTVFKLLTGSRPFD-----RRR-----------FQELLDTISWPEYVGSEARSVISGLLACKETERLGGTPENLLALKSHEYFEG 464
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A835ZAC1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC1_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.360e-21 Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 1
Query: 16 GATVVKTLALKNFKRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSWVRRRSLIALLGRQTEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFMTG 429
G T + L+ ++ +RRS+MGT+GYMAPEM L+ + GY +AVD+WSLG T+YK+LTG RPF+ +R L +L EV +PPY+S A + LL + RLG P ++K+H F G
Sbjct: 342 GNTEARKLS-QSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFE-----NKRFLNEIL----------TEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNG 463
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A7S3UVF1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVF1_HETAK) HSP 1 Score: 89.4 bits (220), Expect = 4.050e-20 Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 43 LKNFKRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSWVRRRSLIALLGRQ--TEFEKLQA-EVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDI 405
++N++R S++GT GYMAPE+ KL+ GY + VD+WSLG T YK+LTG RPFD P + S Q +E+E L + +V+YP Y+S A FI L + R+G G G++ +
Sbjct: 13 VENWRRISIIGTKGYMAPEVVKLMSPADGPRKGYTKTVDYWSLGVTTYKLLTGRRPFDNP----KSSFFHSNRHQHRSEYENLLSRKVEYPSYVSSEAKSFIKECLDVNEETRMG-GRGGRQRL 131
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A6H5J5J4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5J4_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 3.130e-18 Identity = 50/119 (42.02%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 55 KRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSWVRRRSLIALLGR--------QTEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGP 387
+RRS+MGT GYMAPEM L + VGY+ AVD+WSLG TV+K+LTG+RPFD RR A + Q ++ +L + +P Y+ A IS LL ++RLG P
Sbjct: 409 RRRSIMGTQGYMAPEMVILPKQPRSVRVGYSNAVDYWSLGVTVFKLLTGSRPFD------RRRFQAFVDDTRCRMGLDQKKYNELLDTISWPEYVGSEARSVISGLLACKETERLGGTP 521
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A7S1SFL0_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SFL0_ALECA) HSP 1 Score: 87.0 bits (214), Expect = 3.590e-18 Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 1
Query: 49 NFKRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSWVRRRSLIALLGRQTEFEKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFM 423
NF +S GT Y+APE+ + + G+ AVDW+SLGA +Y+MLTG PP + + R + + R+ E+DYPPYL+ A + ALLR + RLG GPT E+++ H F
Sbjct: 18 NFSAKSTCGTPEYLAPEIFQ--------KKGHGRAVDWYSLGALMYEMLTGL----PPYYAKTREQLLVNMRR-------GELDYPPYLAVQAHQVLQALLRRQPAQRLGSGPTDGEEVRGHAFF 123
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Match: A0A067C3F6_SAPPC (Serine/threonine protein kinase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C3F6_SAPPC) HSP 1 Score: 87.4 bits (215), Expect = 1.160e-17 Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = 1
Query: 22 TVVKTLA----LKNFKRRSVMGTNGYMAPEM--AKLIDETSEKEVGYNEAVDWWSLGATVYKMLTGTRPFDPPSW--------VRRRSLIALLGRQTEF----EKLQAEVDYPPYLSDPAVGFISALLRHSVSDRLGCGPTGKEDIKSHIFMTG 429
TV K+ A KN +R++ +GT GYMAPE+ KL+ E+ GYN +D+WSLG T+Y+++ G +PF+ + + + +A L ++++ E++ A VDYP +S A FI+ LL + +R+GC G DI H F G
Sbjct: 95 TVPKSFARPPDAKNTRRKTTVGTKGYMAPELISGKLLRR--EERPGYNFTIDYWSLGVTIYELICGYQPFNLYNVLGDGFLAEIAQEVEVAKLSPRSQYRAELERMAAGVDYPDQVSANARDFINRLLEVNAVNRMGCTSRGFLDIMEHPFFHG 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93677.16800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig93677.16800.1 >prot_H-elongata_contig93677.16800.1 ID=prot_H-elongata_contig93677.16800.1|Name=mRNA_H-elongata_contig93677.16800.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp QIRKHGATVVKTLALKNFKRRSVMGTNGYMAPEMAKLIDETSEKEVGYNEback to top mRNA from alignment at H-elongata_contig93677:687..2180+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig93677.16800.1 ID=mRNA_H-elongata_contig93677.16800.1|Name=mRNA_H-elongata_contig93677.16800.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1494bp|location=Sequence derived from alignment at H-elongata_contig93677:687..2180+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig93677:687..2180+ >mRNA_H-elongata_contig93677.16800.1 ID=mRNA_H-elongata_contig93677.16800.1|Name=mRNA_H-elongata_contig93677.16800.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig93677:687..2180+ (Himanthalia elongata Himel1 dioecious)back to top |