prot_H-elongata_contig9327.16774.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9327.16774.1
Unique Nameprot_H-elongata_contig9327.16774.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A6H5JVV4_9PHAE (HIG1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV4_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 7.000e-32
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    1 MVMHYANLNPAVYGITER------PTSDVKV-PAMNQLTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNGGVF 108
            +VMH AN +P  YGI +        T   K+     +L   Q+ ANW Y+NPFKM+ GMGV AVGGILYSMR E +LK+SQKL+HTRVYGQM+VV++ V  M+F+ETMRR GG+F
Sbjct:   76 LVMHGANHDPHAYGIVDDVVGADGTTGKSKILQPREELNAAQQLANWCYVNPFKMVVGMGVPAVGGILYSMRNEGNLKLSQKLIHTRVYGQMTVVSIAVAMMVFQETMRRRGGLF 190          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A835ZA60_9STRA (HIG1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA60_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.660e-21
Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 0
Query:    2 VMHYANLNPAVYGI------TERPTSDVKVPAMNQLTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKE--THLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNGGVFV 109
            VM  A  +PA YGI        +PT   ++P+   L +  R AN  Y NPF +IAG+GV AVG I +   +E   HLK SQK+MHTRV+GQM+V+ +LV+TM FR+ M +NGG+FV
Sbjct:   72 VMSGAQTDPAKYGIFPKGHMAAQPTEQ-RLPS---LQWYHRLANTAYSNPFGLIAGVGVPAVGAIFWQQSREGHNHLKFSQKVMHTRVFGQMTVLGVLVSTMFFRDYMYKNGGLFV 183          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A835YR00_9STRA (HIG1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR00_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.960e-20
Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    6 ANLNPAVYGITERPTSDVKVPAMNQ---LTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKE--THLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNGGVFV 109
            A  +PA+YGI  +        A  Q   L +  R AN  Y NPF  IA +GV AVG I +   +E   HLK SQK+MHTRV+GQM+V+ +LV+TM+FR+ M RNGG++V
Sbjct:   77 AQHDPALYGIYPKGHVATAQQARQQRATLRWYHRLANGAYSNPFAFIAALGVPAVGAIFWQQSREGHAHLKFSQKVMHTRVFGQMTVLGVLVSTMVFRDYMYRNGGLYV 185          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A7S2W876_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W876_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.660e-18
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    3 MHYANLNPAVYGITER---PTSDVKVPAMN----QLTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNG 105
            M     NP  YG+       T+ V++ + N    QL    RAANW Y +PF ++AG  V  VG I YS     HLK+SQK+MHTRV GQ SVVT+L++ M FR+ M R+G
Sbjct:   81 MSDVKFNPRKYGLNRDGSLATAPVQMNSPNVLKGQLMAHHRAANWAYDHPFHVLAGCAVPLVGSIFYSQTGHDHLKLSQKIMHTRVLGQASVVTLLLSVMFFRDYMDRHG 190          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A7S2DNA0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNA0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.950e-16
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   31 LTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNGGVFVAASQD 114
            L    RA NW   +PF+++AG     V GI Y+ RK  HLK+SQK+MHTRV GQ SV++ L+  M+FR+ M R G    AA +D
Sbjct:  112 LGLQHRAVNWFNDHPFQLLAGCSAPVVLGIFYTQRKSNHLKLSQKIMHTRVIGQASVLSFLIGLMLFRDYMDREGKYLEAAEKD 195          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A6A3P5W9_9STRA (HIG1 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P5W9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.860e-15
Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    9 NPAVYGITERPTS-DVKVPAMNQLTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNGGVFVAASQDE 115
            NP +Y  +  P   +++VP  + L   QRAAN+ Y +P++M+A +GV  VGGI       T ++ SQ++MHTR+YGQ +VV +L+ +M F + M++ G      + DE
Sbjct:   86 NPQMYLASTNPNFVELRVPKQSSLMMYQRAANYWYDHPYRMLATVGVPLVGGIFAYQSLNTSIQRSQQIMHTRIYGQTAVVVLLLGSMAFSDYMKKRGRFEEVETDDE 193          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A329RZG3_9STRA (HIG1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RZG3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.720e-13
Identity = 41/113 (36.28%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    2 VMHYANLNPAVYGITERPTSDVKVPAMNQLTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNGGVFVAASQD 114
            +MH A  NP +Y  T   +        +QL F Q++AN+LY +P++ +  +GV  VGGI         +  SQ++MHTR+YGQ SVV +L+++M F + M + G   V  ++D
Sbjct:   87 LMHGAR-NPELYMATMDGSYVAPTKEKSQLKFWQKSANFLYDHPYRALITVGVPLVGGIYSYQHLNKGISTSQQIMHTRIYGQASVVVLLLSSMAFHDYMAKRGRFTVEDNED 198          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A662YAD3_9STRA (HIG1 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAD3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.630e-12
Identity = 32/84 (38.10%), Postives = 58/84 (69.05%), Query Frame = 0
Query:   22 DVKVPAMNQLTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNG 105
            ++++   + L   QRAAN+ Y +P++++AG+GV  VGGI       + ++ SQ++MHTR+YGQ +VV +L+++M F + M++ G
Sbjct:  102 ELQLEKQSSLKLHQRAANYWYDHPYRVLAGVGVPLVGGIFAFQSMNSAIQRSQQIMHTRIYGQTAVVALLLSSMAFSDYMKKRG 185          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A482SIM7_9ARCH (HIG1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIM7_9ARCH)

HSP 1 Score: 69.7 bits (169), Expect = 3.660e-12
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    6 ANLNPAVYGITERPTSDVKVPAMNQ---LTFP--QRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNG 105
            A  +P  YGI +       VP  +Q   L  P  QR  N++Y +PF++I  + +   GGILY+   + HL ISQ++MH+RV+ Q  V+++L+TTM F E M + G
Sbjct:   90 AQRHPEKYGIHDM------VPLQHQQEPLKLPRYQRFMNYVYDHPFQLITALSIPFAGGILYTQMGQQHLTISQRIMHSRVFAQAGVLSILLTTMGFLEYMEKRG 188          
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Match: A0A6G0X4K7_9STRA (HIG1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4K7_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.900e-12
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 0
Query:   25 VPAMNQLTFPQRAANWLYLNPFKMIAGMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRETMRRNG 105
            VP    L   QRAAN++  +PF+ +A      VGGI     + T++++SQK+MHTR+YGQ S V +L++TM F + M R G
Sbjct:   98 VPRHGSLPLHQRAANFVLDHPFRTVAVTAAPIVGGIYLYQNQNTNIQLSQKIMHTRIYGQGSCVVILLSTMAFYDYMSRRG 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9327.16774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVV4_9PHAE7.000e-3255.65HIG1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZA60_9STRA9.660e-2148.28HIG1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YR00_9STRA9.960e-2047.71HIG1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2W876_9STRA2.660e-1845.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DNA0_9STRA3.950e-1647.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6A3P5W9_9STRA6.860e-1537.96HIG1 domain-containing protein n=4 Tax=Phytophthor... [more]
A0A329RZG3_9STRA8.720e-1336.28HIG1 domain-containing protein n=2 Tax=Phytophthor... [more]
A0A662YAD3_9STRA1.630e-1238.10HIG1 domain-containing protein n=1 Tax=Nothophytop... [more]
A0A482SIM7_9ARCH3.660e-1239.05HIG1 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A6G0X4K7_9STRA4.900e-1243.21HIG1 domain-containing protein n=1 Tax=Aphanomyces... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007667Hypoxia induced protein, domainPFAMPF04588HIG_1_Ncoord: 44..92
e-value: 1.1E-5
score: 25.5
IPR007667Hypoxia induced protein, domainPROSITEPS51503HIG1coord: 18..109
score: 16.073
IPR040153Respiratory supercomplex factor 2, mitochondrialPANTHERPTHR28018FAMILY NOT NAMEDcoord: 28..101
NoneNo IPR availablePANTHERPTHR28018:SF2RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIALcoord: 28..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..98
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9327contigH-elongata_contig9327:1074..1891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9327.16774.1mRNA_H-elongata_contig9327.16774.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9327 579..2988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9327.16774.1 ID=prot_H-elongata_contig9327.16774.1|Name=mRNA_H-elongata_contig9327.16774.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MVMHYANLNPAVYGITERPTSDVKVPAMNQLTFPQRAANWLYLNPFKMIA
GMGVSAVGGILYSMRKETHLKISQKLMHTRVYGQMSVVTMLVTTMMFRET
MRRNGGVFVAASQDEEGADDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007667Hypoxia_induced_domain
IPR040153Rcf2