prot_H-elongata_contig93152.16768.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig93152.16768.1
Unique Name	prot_H-elongata_contig93152.16768.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	108

Homology

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.170e-39
Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 0

Query:    1 VVKLDGYTGPQWLDEDLYRNCIPIAPVETFWSAPGQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            VVK +GY+G +W  ++ YR C+PI+PV+T W       +GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:  148 VVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 247

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 6.450e-38
Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 0

Query:    1 VVKLDGYTGPQWLDEDLYRNCIPIAPVETFWSAPGQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            VVK +GY+G +W  ++ YR C+PI+PV+T W       +GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:  322 VVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 421

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 8.450e-38
Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 0

Query:    1 VVKLDGYTGPQWLDEDLYRNCIPIAPVETFWSAPGQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            VVK +GY+G +W  ++ YR C+PI+PV+T W       +GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:   39 VVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 138

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 7.440e-37
Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 0

Query:    1 VVKLDGYTGPQWLDEDLYRNCIPIAPVETFWSAPGQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            VVK +GY+G +W  ++ YR C+PI+PV+T W       +GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct: 1453 VVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 1552

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.000e-26
Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 0

Query:   36 QDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            +  +GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:    6 KGEDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 76

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 3.910e-26
Identity = 53/76 (69.74%), Postives = 58/76 (76.32%), Query Frame = 0

Query:   31 WSAPGQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            WS   +D  GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:   67 WSTGRKD--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 140

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 7.110e-26
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 0

Query:   35 GQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            G+D  GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:    5 GED--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 74

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BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.530e-25
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 0

Query:   35 GQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            G+D  GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:    5 GED--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 74

[Close]

BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.970e-25
Identity = 50/68 (73.53%), Postives = 55/68 (80.88%), Query Frame = 0

Query:   39 EGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            +GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:    4 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRI 71

[Close]

BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.960e-24
Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 0

Query:   35 GQDHEGGAMTTLQLPLKLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEPMPFDRL 106
            G+D  GG     QLPL+L WAITMHKSQGQTL+KAVI LG KEA  GLTFVCLSRAK L DL+VEPM FDR+
Sbjct:    5 GED--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRI 74

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot

BLAST of mRNA_H-elongata_contig93152.16768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUS2_9PHAE	2.170e-39	62.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	6.450e-38	62.26	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	8.450e-38	62.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L976_9PHAE	7.440e-37	62.26	ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ...	[more]
A0A6H5KSF1_9PHAE	2.000e-26	70.42	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	3.910e-26	69.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFN2_9PHAE	7.110e-26	72.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	1.530e-25	72.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K214_9PHAE	2.970e-25	73.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN08_9PHAE	1.960e-24	72.22	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 43..96 e-value: 2.6E-5 score: 26.5
None	No IPR available	PANTHER	PTHR23274:SF32	ATP-DEPENDENT DNA HELICASE PIF1	coord: 21..98
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 21..98
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 33..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig93152	contig	H-elongata_contig93152:348..671 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig93152.16768.1	mRNA_H-elongata_contig93152.16768.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig93152 348..671 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig93152.16768.1 ID=prot_H-elongata_contig93152.16768.1|Name=mRNA_H-elongata_contig93152.16768.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
VVKLDGYTGPQWLDEDLYRNCIPIAPVETFWSAPGQDHEGGAMTTLQLPL
KLYWAITMHKSQGQTLSKAVIGLGEKEAYNGLTFVCLSRAKTLTDLLVEP
MPFDRLSR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase