mRNA_H-elongata_contig9305.16758.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9305.16758.1
Unique NamemRNA_H-elongata_contig9305.16758.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: D7FS66_ECTSI (Putative cyclin A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS66_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 3.060e-121
Identity = 179/217 (82.49%), Postives = 194/217 (89.40%), Query Frame = 1
Query:    1 QFLLDPHPL-QVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE 648
            QF L    L Q V+LIDRSL+AFEVPR KLQLLGCACVVLASKYEEI+APTAEELAHISDNTYTRAEII+MEL VVN LQFRLTC+TPCNF +RFC AA+S ARERSLV YLLELLLQDY GV+LLPSLKAAAALYLARQTLHP+GCPREAWT+QTE+YT Y+AR LEPCVRRLH LH+RAEGNNLHAVRDKYKK  +HRVAE TCALE+ L FGEE
Sbjct:  120 QFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTCITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHFGEE 336          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A6H5L2E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E4_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 2.090e-115
Identity = 177/217 (81.57%), Postives = 192/217 (88.48%), Query Frame = 1
Query:    1 QFLLDPHPL-QVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE 648
            QF L    L Q V+LIDRSL+AFEVPR KLQLLGCACVVLASKYEEI+APTAEELAHISDNTYTRAEII+MEL VVN LQFRLT +TPCNF +RFC AA+S ARERSLV YLLELLLQDY GV+LLPSLKAAAALYLARQTLHP+GCPREAWT+QTE+YT Y+AR LEPCVRRLH LH+RAEGNNLHAVRDKYKK  +HRVAE TCALE+ L FG E
Sbjct:  360 QFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTSITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHFGGE 576          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A835YJW4_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW4_9STRA)

HSP 1 Score: 186 bits (471), Expect = 7.060e-53
Identity = 105/214 (49.07%), Postives = 136/214 (63.55%), Query Frame = 1
Query:    1 QFLLDPH-PLQVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFF 639
            +F L P  P  V+EL+DRSL+AF V R  LQLLGCAC+++A+K+EE   P+   L +ISD+ YT ++++ ME +V+  L F ++CVTP +F   F  AA   AR+  L  YLLEL L DY  V+LLPS KAAAA  LAR T+   G    AW+     +T YSA  LEPCVRR+  LH  AE + LHA+RD+Y K + HRVA   C  E  L F
Sbjct:  264 EFRLQPGTPFLVIELLDRSLSAFCVNRDNLQLLGCACLLVAAKFEEEHPPSVNSLVYISDSAYTISDMVRMEGQVLQHLNFAVSCVTPHHFAAEFSAAAGCNARQGYLCLYLLELALLDYSLVSLLPSHKAAAAALLARMTMRRGG---GAWSALARQFTGYSAATLEPCVRRMRVLHESAENSKLHAIRDRYCKQERHRVALVCCLKESELVF 474          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A836CJX2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 8.480e-43
Identity = 92/203 (45.32%), Postives = 124/203 (61.08%), Query Frame = 1
Query:   34 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLVGYLLELLLQDYFGV-TLLPSLKAAAALYLARQTLHPKGCPRE--AWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENL 633
            VEL+DRSLTA    R  LQ L CAC++LA+K+EE  AP++  LA ISDN ++RA ++  E +V+  L+FR++C TP  +   +C AA   AR+  L  Y+LEL L DY  V T +PSL+AAAA +LAR T+          AW      ++ Y A  LE C RR+HALH  AE   L AVR+K+ +P   RVA   CA + +L
Sbjct:   86 VELLDRSLTALCTARCDLQRLACACLLLAAKHEEEQAPSSSALACISDNAFSRAGVLRTEAQVLVALEFRVSCATPYQYAALYCAAAGCDARQARLCLYILELSLLDYTLVHTYVPSLRAAAAAFLARATMCTSAAAAAGAAWPPTAARFSGYGAAQLEACARRMHALHEGAEDALLRAVREKHARPGALRVAALCCASDAHL 288          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A817B2C1_BRANA ((rape) hypothetical protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A817B2C1_BRANA)

HSP 1 Score: 147 bits (371), Expect = 6.330e-40
Identity = 91/220 (41.36%), Postives = 126/220 (57.27%), Query Frame = 1
Query:   34 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE-------PCV 657
            V  +DR L+A  + R +LQL+G + +++ASKYEEI  P  E+  +I+DNT+TR +++SME  ++  LQF L C T   F+ RF R A+    E       L  YL EL L DY  V  LPSL A++A++LAR  + PK  P   W +  E YT+Y A  L+ CV  +H L+L   GN L AVR+KYK+ +   VA    + E  L F E+       PCV
Sbjct:   66 VSYVDRFLSAKPIHRQRLQLVGVSAMLIASKYEEISPPKVEDFVYITDNTFTRQDVVSMEADILLALQFELGCPTIKTFLRRFTRVAQEDFNESLLQIEFLCCYLSELSLLDYTCVKFLPSLLASSAVFLARFIIRPKQHP---WNQMLEEYTKYKASDLQQCVGIIHDLYLSRRGNVLEAVRNKYKQHKFKCVATLPVSPELPLAFFEDVTIRDLKPCV 282          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: M4FHY1_BRARP (Cyclin N-terminal domain-containing protein n=13 Tax=Brassiceae TaxID=981071 RepID=M4FHY1_BRARP)

HSP 1 Score: 147 bits (371), Expect = 4.570e-39
Identity = 91/220 (41.36%), Postives = 126/220 (57.27%), Query Frame = 1
Query:   34 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGEE-------PCV 657
            V  +DR L+A  + R +LQL+G + +++ASKYEEI  P  E+  +I+DNT+TR +++SME  ++  LQF L C T   F+ RF R A+    E       L  YL EL L DY  V  LPSL A++A++LAR  + PK  P   W +  E YT+Y A  L+ CV  +H L+L   GN L AVR+KYK+ +   VA    + E  L F E+       PCV
Sbjct:  152 VSYVDRFLSAKPIHRQRLQLVGVSAMLIASKYEEISPPKVEDFVYITDNTFTRQDVVSMEADILLALQFELGCPTIKTFLRRFTRVAQEDFNESLLQIEFLCCYLSELSLLDYTCVKFLPSLLASSAVFLARFIIRPKQHP---WNQMLEEYTKYKASDLQQCVGIIHDLYLSRRGNVLEAVRNKYKQHKFKCVATMPVSPELPLAFFEDVTIRDLKPCV 368          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: CCA21_ARATH (Cyclin-A2-1 n=7 Tax=Arabidopsis thaliana TaxID=3702 RepID=CCA21_ARATH)

HSP 1 Score: 148 bits (374), Expect = 6.460e-39
Identity = 87/208 (41.83%), Postives = 118/208 (56.73%), Query Frame = 1
Query:   34 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFG 642
            V LIDR ++   + + KLQLLG  C+++ASKYEEI AP  EE   I+DNTYTR E++SME+KV+N L FRL+  T   F+ RF RAA++  +        L  Y  EL L +Y  +  LPSL AA+A++LAR TL     P   W +  ++YT Y   AL+  V  +  L L   G+ L A+  KY + +  RVA  T     N  F 
Sbjct:  238 VNLIDRFMSHNYIEKQKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLARWTLDQSNHP---WNQTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRVATLTSPERVNTLFS 442          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: G7JBQ1_MEDTR (B-like cyclin n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7JBQ1_MEDTR)

HSP 1 Score: 148 bits (374), Expect = 1.140e-38
Identity = 90/221 (40.72%), Postives = 132/221 (59.73%), Query Frame = 1
Query:    1 QFLLDPHPLQV-VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSK-----ARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFFGE 645
            ++ L P  L + V LIDR L+   + + +LQLLG  C+ +ASKYEE+ AP  EE   I+DNTYT+ E++ ME +V+N L+F+L+  T   F+ RF +AA+S      A    L  YL EL L +Y  +  LPS  AA+A++LAR TL+    P   WT   E++T Y A  L+P V  L  L L  +G +LHA+R+KYK  + + VA+ +    ++LF  +
Sbjct:  260 EYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFIRRFIQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFLPSRVAASAVFLARWTLNHSEHP---WTTTLEHFTNYKASELKPVVLALEDLQLNTKGCSLHAIREKYKHEKFNGVAKLSPKPVQSLFQAQ 477          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A843VSF0_COLES (Cyclin N-terminal domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VSF0_COLES)

HSP 1 Score: 147 bits (371), Expect = 1.460e-38
Identity = 82/207 (39.61%), Postives = 126/207 (60.87%), Query Frame = 1
Query:   34 VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARERSLV-----GYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEATCALEENLFF 639
            V  IDR L++  + R KLQLLG +C+++ASKYEEI  P  E+  +I+DNTYT+ E++ ME  ++  L+F +   T   F+ RF RA +  ++ +SL       YL EL + DY  +  +PS+ AA+A++++R TL+P   P   WTK  ++YT Y   AL+ CV  +H + L  +G++L A+RDKYK+   H+ +   C     LFF
Sbjct:  191 VSYIDRFLSSNAINRQKLQLLGVSCMLIASKYEEISPPHVEDFCYITDNTYTKEEVVKMESDILRFLKFEMGNPTIKTFLRRFVRAGQDDSKSQSLQLEFLSNYLAELSMLDYGCIRFIPSVIAASAVFMSRFTLNPNAHP---WTKTLQHYTGYKPSALKDCVHAIHDIQLNRKGSSLVAIRDKYKQ---HKASLWLCLSSFMLFF 391          
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Match: A0A6P5XT47_DURZI (cyclin-A2-2 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5XT47_DURZI)

HSP 1 Score: 148 bits (374), Expect = 1.590e-38
Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 1
Query:    1 QFLLDPHPLQV-VELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPTAEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARSKARE-----RSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREAWTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRVAEAT 612
            ++ L P  L + V LIDR L+   + + +LQLLG AC+++ASKYEEI AP  EE   I+DNTYTR E++ ME KV+N L F+L+  T   F+ RF +AA++  +        L  YL EL L DY  +  LPSL AA+A++LAR+TL+    P   W    E+YT Y A  L+  V  +  L L   G +L+A+R+KYK+P+   VA  T
Sbjct:  284 EYKLVPDTLYLTVSLIDRFLSHNFIEKQRLQLLGVACMLIASKYEEICAPRVEEFCFITDNTYTRGEVLKMESKVLNFLYFQLSVPTTKTFLRRFIQAAQATYKVPCIELEFLANYLAELTLLDYNFLKFLPSLIAASAVFLARRTLNQSDHP---WNPTLEHYTSYKASELKTTVLAMEDLQLNTNGCSLNAIREKYKQPKFKCVATMT 490          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9305.16758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS66_ECTSI3.060e-12182.49Putative cyclin A n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L2E4_9PHAE2.090e-11581.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJW4_9STRA7.060e-5349.07Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A836CJX2_9STRA8.480e-4345.32Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A817B2C1_BRANA6.330e-4041.36(rape) hypothetical protein n=1 Tax=Brassica napus... [more]
M4FHY1_BRARP4.570e-3941.36Cyclin N-terminal domain-containing protein n=13 T... [more]
CCA21_ARATH6.460e-3941.83Cyclin-A2-1 n=7 Tax=Arabidopsis thaliana TaxID=370... [more]
G7JBQ1_MEDTR1.140e-3840.72B-like cyclin n=1 Tax=Medicago truncatula TaxID=38... [more]
A0A843VSF0_COLES1.460e-3839.61Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6P5XT47_DURZI1.590e-3843.33cyclin-A2-2 n=1 Tax=Durio zibethinus TaxID=66656 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9305contigH-elongata_contig9305:8789..9448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.1
Seed ortholog evalue6e-96
Seed eggNOG ortholog2880.D7FS66
Preferred nameCCNA2
KEGG koko:K06627,ko:K14521,ko:K14611,ko:K21777
KEGG TC2.A.40.6
KEGG Pathwayko03008,ko04110,ko04152,ko04218,ko04914,ko05161,ko05165,ko05169,ko05203,map03008,map04110,map04152,map04218,map04914,map05161,map05165,map05169,map05203
KEGG ModuleM00693
GOsGO:0000003,GO:0000070,GO:0000082,GO:0000083,GO:0000086,GO:0000278,GO:0000280,GO:0000307,GO:0000819,GO:0001932,GO:0001939,GO:0001940,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006325,GO:0006355,GO:0006464,GO:0006468,GO:0006508,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007096,GO:0007127,GO:0007135,GO:0007140,GO:0007141,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0007399,GO:0007405,GO:0007422,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0008356,GO:0009058,GO:0009059,GO:0009555,GO:0009556,GO:0009653,GO:0009790,GO:0009791,GO:0009794,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010015,GO:0010101,GO:0010102,GO:0010311,GO:0010374,GO:0010389,GO:0010440,GO:0010444,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010639,GO:0010948,GO:0010965,GO:0015630,GO:0016043,GO:0016310,GO:0016538,GO:0016569,GO:0016570,GO:0016572,GO:0016579,GO:0017145,GO:0019207,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022622,GO:0023052,GO:0030071,GO:0030154,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033301,GO:0034293,GO:0034641,GO:0034645,GO:0035186,GO:0035556,GO:0035561,GO:0036211,GO:0036445,GO:0042023,GO:0042127,GO:0042325,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043549,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044786,GO:0044839,GO:0044843,GO:0045120,GO:0045165,GO:0045170,GO:0045448,GO:0045786,GO:0045787,GO:0045839,GO:0045841,GO:0045859,GO:0045893,GO:0045930,GO:0045935,GO:0045995,GO:0046483,GO:0048103,GO:0048145,GO:0048146,GO:0048229,GO:0048232,GO:0048236,GO:0048285,GO:0048364,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048527,GO:0048528,GO:0048580,GO:0048582,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051098,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051252,GO:0051254,GO:0051276,GO:0051301,GO:0051321,GO:0051338,GO:0051445,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0055057,GO:0055059,GO:0060255,GO:0061351,GO:0061695,GO:0061982,GO:0061983,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0072089,GO:0080090,GO:0090068,GO:0090304,GO:0090558,GO:0090627,GO:0090696,GO:0090697,GO:0090698,GO:0097123,GO:0097124,GO:0098722,GO:0098772,GO:0098813,GO:0099402,GO:0140013,GO:0140014,GO:1901360,GO:1901564,GO:1901576,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902494,GO:1902554,GO:1902680,GO:1902749,GO:1902806,GO:1902808,GO:1902911,GO:1903046,GO:1903047,GO:1903506,GO:1903508,GO:1905392,GO:1905393,GO:1905818,GO:1905819,GO:1990234,GO:2000026,GO:2000038,GO:2000112,GO:2000123,GO:2000241,GO:2000816,GO:2001141,GO:2001251
EggNOG free text desc.cell division
EggNOG OGsCOG5024@1,KOG0654@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko03032,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutative cyclin A
Ec32 orthologEc-01_000740.1
Exons1
Model size660
Cds size660
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931328.4803174-CDS-H-elongata_contig9305:8788..94481622931328.4803174-CDS-H-elongata_contig9305:8788..9448Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9305 8789..9448 -
1691679792.0458357-CDS-H-elongata_contig9305:8788..94481691679792.0458357-CDS-H-elongata_contig9305:8788..9448Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9305 8789..9448 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9305.16758.1prot_H-elongata_contig9305.16758.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9305 8789..9448 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9305.16758.1

>prot_H-elongata_contig9305.16758.1 ID=prot_H-elongata_contig9305.16758.1|Name=mRNA_H-elongata_contig9305.16758.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
QFLLDPHPLQVVELIDRSLTAFEVPRAKLQLLGCACVVLASKYEEIFAPT
AEELAHISDNTYTRAEIISMELKVVNGLQFRLTCVTPCNFVERFCRAARS
KARERSLVGYLLELLLQDYFGVTLLPSLKAAAALYLARQTLHPKGCPREA
WTKQTEYYTEYSARALEPCVRRLHALHLRAEGNNLHAVRDKYKKPQMHRV
AEATCALEENLFFGEEPCV*
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mRNA from alignment at H-elongata_contig9305:8789..9448-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9305.16758.1 ID=mRNA_H-elongata_contig9305.16758.1|Name=mRNA_H-elongata_contig9305.16758.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=660bp|location=Sequence derived from alignment at H-elongata_contig9305:8789..9448- (Himanthalia elongata Himel1 dioecious)
CAGTTCCTTCTCGACCCCCACCCTCTTCAGGTAGTAGAGCTTATCGATCG GAGTCTCACGGCTTTCGAAGTCCCCCGCGCGAAGCTTCAGCTGCTGGGAT GCGCGTGCGTGGTCCTGGCGAGCAAGTACGAGGAGATATTTGCTCCGACT GCTGAAGAACTCGCCCACATCTCCGACAACACGTATACGCGAGCGGAGAT CATCTCCATGGAGCTGAAGGTGGTGAACGGCCTCCAGTTTCGCCTCACCT GTGTCACCCCGTGCAACTTTGTCGAACGCTTCTGCCGCGCAGCGCGATCG AAGGCCCGCGAGCGCTCCCTCGTGGGGTACCTGTTGGAACTCCTGCTGCA GGACTACTTCGGAGTGACGCTGCTCCCGTCTCTAAAAGCAGCTGCAGCGT TGTACCTCGCGCGGCAAACGCTTCACCCGAAGGGCTGCCCCCGAGAGGCG TGGACAAAGCAAACGGAGTACTACACCGAGTACTCGGCCCGCGCACTGGA GCCGTGCGTCCGTCGGTTGCACGCGCTGCACCTTCGCGCCGAGGGGAACA ACCTGCATGCCGTGCGCGACAAGTACAAGAAGCCCCAGATGCATCGCGTC GCAGAGGCCACGTGCGCTCTCGAGGAGAATCTCTTCTTCGGAGAAGAGCC GTGTGTGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig9305:8789..9448-

>mRNA_H-elongata_contig9305.16758.1 ID=mRNA_H-elongata_contig9305.16758.1|Name=mRNA_H-elongata_contig9305.16758.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1320bp|location=Sequence derived from alignment at H-elongata_contig9305:8789..9448- (Himanthalia elongata Himel1 dioecious)
CAGTTCCTTCTCGACCCCCACCCTCTTCAGGTAGTAGAGCTTATCGATCG
GAGTCTCACGGCTTTCGAAGTCCCCCGCGCGAAGCTTCAGCTGCTGGGAT
GCGCGTGCGTGGTCCTGGCGAGCAAGTACGAGGAGATATTTGCTCCGACT
GCTGAAGAACTCGCCCACATCTCCGACAACACGTATACGCGAGCGGAGAT
CATCTCCATGGAGCTGAAGGTGGTGAACGGCCTCCAGTTTCGCCTCACCT
GTGTCACCCCGTGCAACTTTGTCGAACGCTTCTGCCGCGCAGCGCGATCG
AAGGCCCGCGAGCGCTCCCTCGTGGGGTACCTGTTGGAACTCCTGCTGCA
GGACTACTTCGGAGTGACGCTGCTCCCGTCTCTAAAAGCAGCTGCAGCGT
TGTACCTCGCGCGGCAAACGCTTCACCCGAAGGGCTGCCCCCGAGAGGCG
TGGACAAAGCAAACGGAGTACTACACCGAGTACTCGGCCCGCGCACTGGA
GCCGTGCGTCCGTCGGTTGCACGCGCTGCACCTTCGCGCCGAGGGGAACA
ACCTGCATGCCGTGCGCGACAAGTACAAGAAGCCCCAGATGCATCGCGTC
GCAGAGGCCACGTGCGCTCTCGAGGAGAATCTCTTCTTCGGAGAAGAGCC
GTGTGTGTAACAGTTCCTTCTCGACCCCCACCCTCTTCAGGTAGTAGAGC
TTATCGATCGGAGTCTCACGGCTTTCGAAGTCCCCCGCGCGAAGCTTCAG
CTGCTGGGATGCGCGTGCGTGGTCCTGGCGAGCAAGTACGAGGAGATATT
TGCTCCGACTGCTGAAGAACTCGCCCACATCTCCGACAACACGTATACGC
GAGCGGAGATCATCTCCATGGAGCTGAAGGTGGTGAACGGCCTCCAGTTT
CGCCTCACCTGTGTCACCCCGTGCAACTTTGTCGAACGCTTCTGCCGCGC
AGCGCGATCGAAGGCCCGCGAGCGCTCCCTCGTGGGGTACCTGTTGGAAC
TCCTGCTGCAGGACTACTTCGGAGTGACGCTGCTCCCGTCTCTAAAAGCA
GCTGCAGCGTTGTACCTCGCGCGGCAAACGCTTCACCCGAAGGGCTGCCC
CCGAGAGGCGTGGACAAAGCAAACGGAGTACTACACCGAGTACTCGGCCC
GCGCACTGGAGCCGTGCGTCCGTCGGTTGCACGCGCTGCACCTTCGCGCC
GAGGGGAACAACCTGCATGCCGTGCGCGACAAGTACAAGAAGCCCCAGAT
GCATCGCGTCGCAGAGGCCACGTGCGCTCTCGAGGAGAATCTCTTCTTCG
GAGAAGAGCCGTGTGTGTAA
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