mRNA_H-elongata_contig121879.1675.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: D7FWN8_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN8_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.460e-36 Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 25 VHESCANSGQN-DLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
V S GQ DLPQALIFDCDGVLADTERDGHRPAFN+AFKIKN+DCEW V+LYGKLLSVGGGKERMTAHW+
Sbjct: 40 VESSSTAGGQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWD 113
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A835Z3K7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K7_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.090e-32 Identity = 54/61 (88.52%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 61 LPQALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
LPQALIFDCDGVLADTERDGHRPAFN AFK K IDC W VDLYGKLL VGGGKERMTAHW+
Sbjct: 29 LPQALIFDCDGVLADTERDGHRPAFNEAFKAKGIDCVWDVDLYGKLLEVGGGKERMTAHWD 89
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: W7UBX2_9STRA (Protein cbby n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBX2_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.940e-28 Identity = 49/66 (74.24%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 46 SGQNDLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
+G ++ AL+FDCDGVLADTERDGHRP FN AFK K IDC W V LYG LL VGGGKERMTAHWN
Sbjct: 45 AGDSNANWALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWN 110
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A7R9W5L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5L6_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.430e-27 Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 1
Query: 67 QALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
+A++FDCDGVLADTERDGHRPAFN AFK +ID EWGV+ YG LL GGGKERMTAHWN
Sbjct: 103 EAILFDCDGVLADTERDGHRPAFNRAFKENDIDEEWGVERYGVLLETGGGKERMTAHWN 161
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A7S2FPW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPW0_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.200e-27 Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = 1
Query: 70 ALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
A++FDCDGVLADTERDGHR AFN AFK N+D EW V+LYG+LLSVGGGKERMTAHWN
Sbjct: 53 AILFDCDGVLADTERDGHRVAFNTAFKENNLDTEWSVELYGELLSVGGGKERMTAHWN 110
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A7S1ZBJ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ4_TRICV) HSP 1 Score: 108 bits (271), Expect = 4.020e-27 Identity = 49/72 (68.06%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 28 HESCANSGQNDLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
H S + P+A++FDCDGVLADTERDGHRPAFN AF ID EWGV+ YG LL VGGGKERMTAHWN
Sbjct: 33 HGMSVPSALSVAPEAILFDCDGVLADTERDGHRPAFNRAFAENQIDEEWGVERYGVLLEVGGGKERMTAHWN 104
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A7S2V8N0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N0_9STRA) HSP 1 Score: 108 bits (271), Expect = 4.510e-27 Identity = 44/61 (72.13%), Postives = 54/61 (88.52%), Query Frame = 1
Query: 61 LPQALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
+P+A++FDCDGVLADTERDGHRPAFNA F+ + +D +W +LYG+LL VGGGKERMTAHWN
Sbjct: 47 VPEAILFDCDGVLADTERDGHRPAFNAVFEERRLDTDWTPELYGRLLEVGGGKERMTAHWN 107
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A388L2W8_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L2W8_CHABU) HSP 1 Score: 108 bits (269), Expect = 2.930e-26 Identity = 46/62 (74.19%), Postives = 55/62 (88.71%), Query Frame = 1
Query: 58 DLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
DLP+AL+FDCDGVL DTERDGHR +FNAAF+ K +D EWGVDLYG+LL +GGGKERMT ++N
Sbjct: 123 DLPEALLFDCDGVLVDTERDGHRVSFNAAFEEKGLDVEWGVDLYGELLKIGGGKERMTHYFN 184
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A8J4GZ07_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4GZ07_9CHLO) HSP 1 Score: 106 bits (264), Expect = 4.630e-26 Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 37 CANSGQNDLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
C + LP+AL+FDCDGVL DTERDGHR +FN AFK K +D EWGVDLYG+LL +GGGKERMT ++N
Sbjct: 30 CVLAKAQQLPEALLFDCDGVLVDTERDGHRISFNQAFKQKGLDHEWGVDLYGELLEIGGGKERMTKYFN 98
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Match: A0A7S4IMN1_9STRA (Hypothetical protein n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IMN1_9STRA) HSP 1 Score: 106 bits (264), Expect = 8.170e-26 Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 67 QALIFDCDGVLADTERDGHRPAFNAAFKIKNIDCEWGVDLYGKLLSVGGGKERMTAHWN 243
+A++FDCDGVLADTERDGHRPAFN AFK ID EWG++ YG LL GGGKERMTAHWN
Sbjct: 49 EAILFDCDGVLADTERDGHRPAFNRAFKENGIDEEWGIERYGVLLETGGGKERMTAHWN 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121879.1675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig121879.1675.1 >prot_H-elongata_contig121879.1675.1 ID=prot_H-elongata_contig121879.1675.1|Name=mRNA_H-elongata_contig121879.1675.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp EGEAATVPVHESCANSGQNDLPQALIFDCDGVLADTERDGHRPAFNAAFKback to top mRNA from alignment at H-elongata_contig121879:342..973+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig121879.1675.1 ID=mRNA_H-elongata_contig121879.1675.1|Name=mRNA_H-elongata_contig121879.1675.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=632bp|location=Sequence derived from alignment at H-elongata_contig121879:342..973+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig121879:342..973+ >mRNA_H-elongata_contig121879.1675.1 ID=mRNA_H-elongata_contig121879.1675.1|Name=mRNA_H-elongata_contig121879.1675.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=528bp|location=Sequence derived from alignment at H-elongata_contig121879:342..973+ (Himanthalia elongata Himel1 dioecious)back to top |