mRNA_H-elongata_contig9297.16746.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A6H5KVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD9_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.470e-49 Identity = 167/253 (66.01%), Postives = 179/253 (70.75%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------GGRLSFLLNKMQSDEEARVLLKEEFKKTEAQASKPMKR 675
+VS MEDKLRALH +SLELETQLQVEA+GRRSAEE NR L+T AENARQ+++ELQGKV RSEAERMRMEMESR+SGEQLR+MAEKVFQLLERLKLAELAKNKAMEALR KDQE+V EGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGRLSFLLNKMQSDEE+RV+LKEE KKTEAQ M R
Sbjct: 329 KVSSMEDKLRALHARSLELETQLQVEARGRRSAEEANRELVTGAENARQSLRELQGKVQRSEAERMRMEMESRDSGEQLREMAEKVFQLLERLKLAELAKNKAMEALRHKDQELVXXXXXXXXXXXXXXXEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETQDKVKRVPGSEVKRTVSFGSVVGVSKRNPNLVRTLGGRLSFLLNKMQSDEESRVILKEESKKTEAQVKSLMVR 581
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A7S3GZC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZC5_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.710e-37 Identity = 78/141 (55.32%), Postives = 115/141 (81.56%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
QV+GME++LR L ++++L+TQ++VE++GR + EE N+ L N N +ELQ K+D+SE ER+RME E R+SG+QLR MAEKV QLLERLKLAEL K+KAMEAL++K+Q++V++++KN+ LIK +T+EGK++V AE++
Sbjct: 99 QVAGMEEQLRGLQARNVDLDTQIKVESRGRNNLEESNKELQVENSNLFNNNRELQNKIDKSEKERIRMEAECRDSGDQLRTMAEKVLQLLERLKLAELGKSKAMEALKKKEQDMVSLQKKNASLIKNATEEGKAKVAAEMN 239
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A662XEA5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEA5_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.450e-33 Identity = 76/141 (53.90%), Postives = 114/141 (80.85%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
Q++ MEDK R LHT++ ELETQ+Q+EA+ +R+ + N++ N +++ +ELQ + D++E ER RME E+R+S +QLR+MAEKVFQLLERLKLAEL K KA++ L++K+ E++A+K+KN+RL+KE T+EGK+RVK+E+D
Sbjct: 225 QLAAMEDKARKLHTRNQELETQVQLEAKAKRAQIDANKSFFIENGNLQRDKQELQSRFDKAEQERTRMEAENRDSADQLREMAEKVFQLLERLKLAELGKTKAIDGLKQKELELLALKKKNARLLKEGTQEGKARVKSEMD 365
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A3F2RS11_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RS11_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.520e-33 Identity = 76/141 (53.90%), Postives = 114/141 (80.85%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
Q++ +EDK+R LH ++ ELETQ+Q+EA+ +R+ + N+N N +++ +ELQ + D++E ER RME E+R+S +QLR+MAEKVFQLLERLKLAEL K KA++ L++K+ E++A+K+KN+RL+KE T+EGK+RVK+ELD
Sbjct: 225 QLASVEDKVRKLHARNQELETQVQLEAKAKRAQIDANKNFFIENGNLQRDKQELQTRFDKAEQERSRMEAENRDSADQLREMAEKVFQLLERLKLAELGKTKAIDGLKQKELEMLALKKKNARLLKEGTQEGKARVKSELD 365
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A3R7I0Y9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7I0Y9_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.700e-32 Identity = 75/140 (53.57%), Postives = 113/140 (80.71%), Query Frame = 1
Query: 4 VSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
++ +EDK+R LH ++ ELETQ+Q+EA+ +R+ + N+N N +++ +ELQ + D++E ER RME E+R+S +QLR+MAEKVFQLLERLKLAEL K KA++ L++K+ E++A+K+KN+RL+KE T+EGK+RVK+ELD
Sbjct: 226 LASVEDKVRKLHARNQELETQVQLEAKAKRAQIDANKNFFIENGNLQRDKQELQTRFDKAEQERSRMEAENRDSADQLREMAEKVFQLLERLKLAELGKTKAIDGLKQKELEMLALKKKNARLLKEGTQEGKARVKSELD 365
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A813BM05_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BM05_9DINO) HSP 1 Score: 132 bits (331), Expect = 2.110e-32 Identity = 80/141 (56.74%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
Q+ ME+K+R LH K++ELETQLQVEA+ +R+ +E N+ L+ S N R +ELQ K+++ E+ER+RM KVFQLLERLKLAEL K+KA+EALR K+QEV A+K+KNSRL+KESTKEGK+RV+AELD
Sbjct: 229 QLGIMEEKIRTLHAKTVELETQLQVEARAKRNQQETNKRLLASEANLRSQNQELQEKIEKIESERLRMXXXXXXXXXXXXXXXXKVFQLLERLKLAELGKSKAVEALRLKEQEVTALKKKNSRLLKESTKEGKARVQAELD 369
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: H3GJQ8_PHYRM (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GJQ8_PHYRM) HSP 1 Score: 133 bits (335), Expect = 3.930e-32 Identity = 75/141 (53.19%), Postives = 113/141 (80.14%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
Q++ E+K R LH ++ ELETQ+Q+EA+ +R+ + N+N N +++ +ELQ ++D++E ER RME E+R+S +QLR+MAEKVFQLLERLKLAEL K KA++ L++K+ E++A+K+KN+RL+KE T+EGK+RVK+ELD
Sbjct: 244 QLASAEEKTRKLHARNQELETQVQLEAKAKRAQIDANKNFFIENGNLQRDKQELQTRLDKAEQERSRMEAENRDSADQLREMAEKVFQLLERLKLAELGKTKAIDGLKQKEIELLALKKKNARLLKEGTQEGKARVKSELD 384
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A0W8DMV4_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DMV4_PHYNI) HSP 1 Score: 132 bits (333), Expect = 5.310e-32 Identity = 76/141 (53.90%), Postives = 110/141 (78.01%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
Q++ EDK R LH ++ ELETQ+Q+EA+ +R + N+N N +++ ELQ + D++E ER RME E+R+S +QLR+MAEKVFQLLERLKLAEL K KA++ L++K+ E++A+K+KN+RL+KE T+EGK+RVK+ELD
Sbjct: 183 QLASAEDKARKLHARNQELETQVQLEAKAKRVQIDANKNFFIENGNLQRDKHELQTRFDKAEQERSRMEAENRDSADQLREMAEKVFQLLERLKLAELGKTKAIDGLKQKEVELLALKKKNARLLKEGTQEGKARVKSELD 323
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A833SXS3_PHYIN (Leucine Rich repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SXS3_PHYIN) HSP 1 Score: 133 bits (334), Expect = 5.310e-32 Identity = 76/141 (53.90%), Postives = 111/141 (78.72%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
Q++ EDK R LH ++ ELETQ+Q+EA+ +R+ + N+N N +++ ELQ + D++E ER RME E+R+S +QLR+MAEKVFQLLERLKLAEL K KA++ L++K+ E++A+K+KN+RL+KE T+EGK+RVK+ELD
Sbjct: 244 QLASAEDKARKLHARNQELETQVQLEAKAKRAQIDANKNFFIENGNLQRDKLELQTRFDKAEQERSRMEAENRDSADQLREMAEKVFQLLERLKLAELGKTKAIDGLKQKEIELLALKKKNARLLKEGTQEGKARVKSELD 384
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Match: A0A0P1AQ66_PLAHL (Leucine-rich repeat, ribonuclease inhibitor subtype n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ66_PLAHL) HSP 1 Score: 133 bits (334), Expect = 5.320e-32 Identity = 75/141 (53.19%), Postives = 111/141 (78.72%), Query Frame = 1
Query: 1 QVSGMEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELQGKVDRSEAERMRMEMESRESGEQLRDMAEKVFQLLERLKLAELAKNKAMEALRRKDQEVVAMKQKNSRLIKESTKEGKSRVKAELD 423
Q++ +EDK+R LH ++ ELETQ+Q+EA+ +R+ + N+ T N ++ +ELQ + D++E ER RME E+R+S +QLR+MAEKVFQLLERLKLAEL K A++ L++K+ E++ MK+KN+RL+KE T+EGK+RVK+ELD
Sbjct: 244 QLAALEDKMRKLHVRNQELETQVQLEAKAKRAQIDANKQFFTENGNLLRDKQELQTRFDKAEQERSRMEAENRDSADQLREMAEKVFQLLERLKLAELGKTNAIDGLKQKEIELLTMKKKNARLLKEGTQEGKARVKSELD 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9297.16746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9297.16746.1 >prot_H-elongata_contig9297.16746.1 ID=prot_H-elongata_contig9297.16746.1|Name=mRNA_H-elongata_contig9297.16746.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp MEDKLRALHTKSLELETQLQVEAQGRRSAEEVNRNLITSAENARQNIKELback to top mRNA from alignment at H-elongata_contig9297:7545..9456- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9297.16746.1 ID=mRNA_H-elongata_contig9297.16746.1|Name=mRNA_H-elongata_contig9297.16746.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1912bp|location=Sequence derived from alignment at H-elongata_contig9297:7545..9456- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9297:7545..9456- >mRNA_H-elongata_contig9297.16746.1 ID=mRNA_H-elongata_contig9297.16746.1|Name=mRNA_H-elongata_contig9297.16746.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1356bp|location=Sequence derived from alignment at H-elongata_contig9297:7545..9456- (Himanthalia elongata Himel1 dioecious)back to top |