prot_H-elongata_contig92657.16720.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig92657.16720.1
Unique Nameprot_H-elongata_contig92657.16720.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: D8LJU0_ECTSI (Orotidine-5'-phosphate decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU0_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.400e-25
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 QELNAHAITLNPYMGYDTVKPFLGDPSRGVFVLCKTSNESSNELQTLAVAGSGKALFEEVACLCE 65
            +EL AHAITLN YMG DTV PFL DP+RGVFVLCKTSN SSNELQTL V  SGKALFEEVA LC+
Sbjct:  119 EELGAHAITLNAYMGVDTVDPFLKDPARGVFVLCKTSNRSSNELQTLPVGNSGKALFEEVASLCQ 183          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A0A835Z0K1_9STRA (Orotidine-5'-phosphate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 7.460e-19
Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    2 ELNAHAITLNPYMGYDTVKPFLGDPSRGVFVLCKTSNESSNELQTLAVAGSGKALFEEVACLCE 65
            EL A +IT+N YMG DTV PF+ DPSRGVFVLCKTSN SS E+Q+L +AGS  A+FE+VA L +
Sbjct:  133 ELGAESITINAYMGTDTVAPFIKDPSRGVFVLCKTSNPSSKEVQSLRLAGSNLAVFEQVAALAQ 196          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A6N7I8_PHYCP (Orotidine-5'-phosphate decarboxylase (Fragment) n=20 Tax=Phytophthora TaxID=4783 RepID=A6N7I8_PHYCP)

HSP 1 Score: 84.0 bits (206), Expect = 1.850e-18
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    2 ELNAHAITLNPYMGYDTVKPFL-GDPSRGVFVLCKTSNESSNELQTLAVAGSGKALFEEVACLCER 66
            +LNAHAITL PYMG D++ PF+ G P RG FVLCKTSN S+N+ QTL+V    +ALFEEVA  CE+
Sbjct:   16 QLNAHAITLAPYMGVDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLSVGS--RALFEEVAAKCEQ 79          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A0A225UFH1_9STRA (Orotidine-5'-phosphate decarboxylase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UFH1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.920e-17
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    2 ELNAHAITLNPYMGYDTVKPFL-GDPSRGVFVLCKTSNESSNELQTLAVAGSGKALFEEVACLCER 66
            +L AHAITL PYMG D++ PF+ G P RG FVLCKTSN S+N+ QTL+V    +ALFEEVA  CE+
Sbjct:  111 KLEAHAITLAPYMGQDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLSVGS--RALFEEVAAKCEQ 174          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A0A662WGG3_9STRA (OMPdecase domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.150e-16
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 QELNAHAITLNPYMGYDTVKPFL-GDPSRGVFVLCKTSNESSNELQTLAVAGSGKALFEEVACLCER 66
            ++L AHAITL PYMG D++ PF+ G P RG FVLCKTSN S+N+ QTL+V    +ALFEEVA  CE+
Sbjct:  126 EKLEAHAITLAPYMGQDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLSVGS--RALFEEVAAKCEQ 190          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A0A3N5M3P7_9CHLR (Multifunctional fusion protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5M3P7_9CHLR)

HSP 1 Score: 81.6 bits (200), Expect = 1.480e-16
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 QELNAHAITLNPYMGYDTVKPFLGDPSRGVFVLCKTSNESSNELQTLAVAGSG----KALFEEVACLCER 66
            Q L A AIT+NPY+G+D V+PFL DP+RGVF+LCKTSN  + +LQ L +AGSG      L+E VA L ++
Sbjct:  111 QALGADAITVNPYLGHDAVEPFLSDPARGVFLLCKTSNPGATDLQDLVIAGSGIPAGLTLYETVALLAQK 180          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A0A399ZIA1_9CHLR (Orotidine-5'-phosphate decarboxylase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399ZIA1_9CHLR)

HSP 1 Score: 78.2 bits (191), Expect = 2.010e-16
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 QELNAHAITLNPYMGYDTVKPFLGDPSRGVFVLCKTSNESSNELQTLAVAGSGKA--LFEEVA 61
            +EL AHAIT NPY+G+D + PFL DP RGVFVLC+TSN  ++E+Q LAV     A  LFE VA
Sbjct:  103 EELGAHAITANPYLGHDALAPFLADPRRGVFVLCRTSNPGASEIQELAVTDGASAAPLFEIVA 165          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A0A0P1ACV2_PLAHL (Orotidine 5-phosphate decarboxylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACV2_PLAHL)

HSP 1 Score: 81.3 bits (199), Expect = 2.060e-16
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    2 ELNAHAITLNPYMGYDTVKPFL-GDPSRGVFVLCKTSNESSNELQTLAVAGSGKALFEEVACLCER 66
            +L AHAITL PYMG D++ PF+ G P RG FVLCKTSN S+N+ QTL+V    +ALFEEVA  CE+
Sbjct:  110 KLEAHAITLAPYMGVDSIDPFVRGHPDRGCFVLCKTSNPSANDFQTLSVGS--RALFEEVAAKCEQ 173          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: A0A2D4BRP6_PYTIN (Orotidine 5'-phosphate decarboxylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRP6_PYTIN)

HSP 1 Score: 80.9 bits (198), Expect = 2.950e-16
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    2 ELNAHAITLNPYMGYDTVKPFL-GDPSRGVFVLCKTSNESSNELQTL--AVAGSGKALFEEVACLCE 65
            EL AH+ITL PYMG D++ PF+ G   RG FVLCKTSN S+N+ QTL  AVAG  +ALFE+VA  C+
Sbjct:  274 ELEAHSITLAPYMGQDSIDPFIRGKAERGCFVLCKTSNPSANDFQTLPVAVAGESRALFEQVAIKCQ 340          
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Match: H3G5G5_PHYRM (OMPdecase domain-containing protein n=38 Tax=Phytophthora TaxID=4783 RepID=H3G5G5_PHYRM)

HSP 1 Score: 80.5 bits (197), Expect = 3.480e-16
Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    2 ELNAHAITLNPYMGYDTVKPFL-GDPSRGVFVLCKTSNESSNELQTLAVAGSGKALFEEVACLCER 66
            +L AHAITL PYMG D++ PF+ G P RG FVLCKTSN S+N+ QTL V    +ALFEEVA  CE+
Sbjct:  109 KLEAHAITLAPYMGVDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLPVGS--RALFEEVAAKCEQ 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92657.16720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJU0_ECTSI1.400e-2580.00Orotidine-5'-phosphate decarboxylase n=1 Tax=Ectoc... [more]
A0A835Z0K1_9STRA7.460e-1965.63Orotidine-5'-phosphate decarboxylase n=1 Tax=Tribo... [more]
A6N7I8_PHYCP1.850e-1863.64Orotidine-5'-phosphate decarboxylase (Fragment) n=... [more]
A0A225UFH1_9STRA1.920e-1762.12Orotidine-5'-phosphate decarboxylase n=1 Tax=Phyto... [more]
A0A662WGG3_9STRA1.150e-1661.19OMPdecase domain-containing protein (Fragment) n=1... [more]
A0A3N5M3P7_9CHLR1.480e-1655.71Multifunctional fusion protein n=1 Tax=Chloroflexi... [more]
A0A399ZIA1_9CHLR2.010e-1660.32Orotidine-5'-phosphate decarboxylase (Fragment) n=... [more]
A0A0P1ACV2_PLAHL2.060e-1662.12Orotidine 5-phosphate decarboxylase n=1 Tax=Plasmo... [more]
A0A2D4BRP6_PYTIN2.950e-1661.19Orotidine 5'-phosphate decarboxylase n=1 Tax=Pythi... [more]
H3G5G5_PHYRM3.480e-1662.12OMPdecase domain-containing protein n=38 Tax=Phyto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..66
e-value: 4.4E-19
score: 70.3
IPR001754Orotidine 5'-phosphate decarboxylase domainPFAMPF00215OMPdecasecoord: 2..55
e-value: 2.5E-5
score: 24.0
IPR011995Orotidine 5'-phosphate decarboxylase, type 2PANTHERPTHR43375FAMILY NOT NAMEDcoord: 2..65
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 3..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig92657contigH-elongata_contig92657:761..2265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig92657.16720.1mRNA_H-elongata_contig92657.16720.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig92657 761..2265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig92657.16720.1 ID=prot_H-elongata_contig92657.16720.1|Name=mRNA_H-elongata_contig92657.16720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
QELNAHAITLNPYMGYDTVKPFLGDPSRGVFVLCKTSNESSNELQTLAVA
GSGKALFEEVACLCER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR001754OMPdeCOase_dom
IPR011995OMPdecase_type-2
IPR011060RibuloseP-bd_barrel