mRNA_H-elongata_contig92600.16713.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A6H5KNE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE0_9PHAE) HSP 1 Score: 219 bits (558), Expect = 3.420e-70 Identity = 123/148 (83.11%), Postives = 134/148 (90.54%), Query Frame = 1
Query: 1 GVSGERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGASSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHPAYKTYKEEVSKFLPSV 444
GVSGERGE W AAQ V+LL VL+GNLP+LGG XXXXXXXXXXXXXX LA S+LQLG+ FS WP PAEGGVLNTTGVYSLCRHPMYAGLV FSLGLGF+T SFTRIALACLLGYVLDR+AD+EEEKLV VHPAYKTYKEEVSKF+P++
Sbjct: 67 GVSGERGEAWAAAQVVILLFVLMGNLPLLGGSXXXXXXXXXXXXXXGLATVSALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLVAVHPAYKTYKEEVSKFVPTL 214
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: D8LPT1_ECTSI (S-isoprenylcysteine O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT1_ECTSI) HSP 1 Score: 217 bits (552), Expect = 4.230e-69 Identity = 117/148 (79.05%), Postives = 127/148 (85.81%), Query Frame = 1
Query: 1 GVSGERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGASSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHPAYKTYKEEVSKFLPSV 444
GVSGERGE W AAQ +LL VLLGNLP+LGG XXXXX XXXX L S+LQLG+ FS WP PAEGGVLNTTGVYSLCRHPMYAGLV FSLGLGF+T SFTRIALACLLGYVLDR+AD+EEEKLV VHPAYKTYKEEVSKF+P++
Sbjct: 80 GVSGERGEAWAAAQVTILLFVLLGNLPLLGGSLEXXXXXGLXXXXAGLTTVSALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLVAVHPAYKTYKEEVSKFVPTL 227
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A836C7I2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I2_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.530e-42 Identity = 94/146 (64.38%), Postives = 108/146 (73.97%), Query Frame = 1
Query: 1 GVSGERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGASSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHPAYKTYKEEVSKFLP 438
G GERGE T + +L L+++G++P+LGG XXXXXXXXXXXXXXX S L LGK S WP P E VL TTGVYS+CRHPMYAGL+ FS GLGF T SFTRIALA LL Y LD++A EE+ L VHPAYKTY+EEV KF P
Sbjct: 102 GKVGERGEVLTLIPYAILALLIVGDIPLLGGPXXXXXXXXXXXXXXXXXLTSLLGLGKNLSPWPQPCENNVLITTGVYSICRHPMYAGLLAFSFGLGFATDSFTRIALAALLLYTLDKKATEEEKALEAVHPAYKTYQEEVPKFFP 247
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A7S2IJF5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJF5_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.330e-26 Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 1
Query: 1 GVSGERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGASSLQLGKTFSLWPAPA--------EGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHPAYKTYKEEV-SKFLP 438
G G+RGE + AQ L+LLVL+G LP++G A ++LG S WP PA E G++ TG+YSL RHP+YAGL+ GLGF T S RI LL Y L+++++ EE K+++ P+Y Y+EEV KF+P
Sbjct: 153 GTPGKRGELYFGAQTALVLLVLVGELPLVGDPLKFALGSGAIFGGVGAIIAGVVELGDQLSAWPVPATSSSSQKKEDGLIVDTGIYSLVRHPIYAGLISICGGLGFVTDSTVRIFFTILLYYCLEKKSEFEEGKIIEEDPSYILYREEVRGKFIP 307
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A7S3XX45_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX45_HETAK) HSP 1 Score: 106 bits (264), Expect = 3.920e-25 Identity = 58/147 (39.46%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 1 GVSGERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGASSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHPAYKTYKEEVSKFLPS 441
G GERGE W L+LL+++G++P+L G A A LG S W A L T G Y+L RHP+Y G ++ +LGL TG +R LA L + LD++A EE L HPAYK YK+EV KF P+
Sbjct: 116 GTVGERGEKWVLLNAALVLLIVVGDIPLLEGPLNFVAGPGLLLAGALTALAGIRDLGTNLSPWATDAADNTLTTAGAYALVRHPIYTGELLGALGLANLTGDASRYLLAAALFWCLDQKASEEEAALAARHPAYKVYKDEVPKFFPN 262
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A7S0E531_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E531_9CRYP) HSP 1 Score: 90.9 bits (224), Expect = 1.620e-19 Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 1
Query: 1 GVSGERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGA-------SSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVH-PAYKTYKEEVSKFLPS 441
G G RGE + QF+L+ LV G +AG+ S+ LG++ S +P E VL T GVYS+CRHPMY GL++ +GL TT SF+R+ +L +L+++AD+EE LV H +YK Y ++V K +P+
Sbjct: 85 GEFGSRGEIYVGLQFLLMFLVAFGPF------FEESYQWLEQVSGIAVAGSGFALLYISTQDLGESLSPFPKATEDNVLQTDGVYSICRHPMYGGLILACIGLAMTTVSFSRMLFTIILLLILNQKADVEEGFLVQKHGESYKEYAKKVPKLVPN 233
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A835Y2F1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y2F1_9CHLO) HSP 1 Score: 89.4 bits (220), Expect = 3.510e-19 Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 1
Query: 10 GERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGAS-----SLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHPA-YKTYKEEVSKFLP 438
G RGE W A Q VL L+ + L GA+ + +LG + PAP E L TTG+Y CRHP+YAGL++F+LGL + S TR+A+ L +VL+ + ++EEE LV H Y+ Y+E+ KF P
Sbjct: 74 GTRGEAWVAGQLVLCALLAFPPAGLTS-------FIDTAAVILALGGAAVFSYAAYELGDNLTPLPAPREDAKLVTTGLYGYCRHPIYAGLLVFALGLSVASHSETRLAITAALFWVLNSKVEMEEEGLVAKHGRQYEVYREKTKKFFP 215
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A8J6C9G8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9G8_DIALT) HSP 1 Score: 84.0 bits (206), Expect = 6.310e-17 Identity = 49/150 (32.67%), Postives = 72/150 (48.00%), Query Frame = 1
Query: 1 GVSGERGEGWTAAQFVLLLLVLLGNLPILG--GXXXXXXXXXXXXXXXXLAGASSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHP-AYKTYKEEVSKFLPS 441
G G+RGE + Q + L+LV+ G+LP L L ++ +LG S WP P VL TTG Y+ CRHPMY GL++ +LG S R + LG L +A +EE +L + H + +Y +F+P+
Sbjct: 73 GEPGQRGEAYVGVQLLALILVVFGDLPGLPLLRLLHLILGPLCVSSGCVLVALAAFRLGSNLSPWPVPVAENVLQTTGAYAWCRHPMYVGLLVLALGCATMAQSVPRALVTVCLGLCLRAQALVEERRLRERHAKVWDSYAASTPRFIPA 222
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: A0A0G4GFZ3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GFZ3_9ALVE) HSP 1 Score: 78.6 bits (192), Expect = 1.130e-14 Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 4 VSGERGEGWTAAQFVLLLLVLLGNLPILGGXXXXXXXXXXXXXXXXLAGASSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHP-AYKTYKEEVS-KFLPSV 444
V GE G W AAQ + + +L G +P+L + L +G ++ P E G L G++S+ RHP+ AG ++FSLG+ T S R+ L ++ LDR+ +EEE+LV+ + Y Y EEV ++ P++
Sbjct: 128 VLGENGGWWFAAQTAIFVFLLYGYIPVLDDIIDALAGSFLIWSGVFICVMGLLDMGYQYTPSTVPVEDGDLKKDGIFSVIRHPIDAGFMVFSLGIAVETRSIERVLLTIVMYIFLDRKNTIEEERLVEKYQDKYLKYIEEVPWRYAPTI 276
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Match: UPI00042365D6 (isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Flavobacterium gelidilacus TaxID=206041 RepID=UPI00042365D6) HSP 1 Score: 74.7 bits (182), Expect = 3.790e-14 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 154 SSLQLGKTFSLWPAPAEGGVLNTTGVYSLCRHPMYAGLVMFSLGLGFTTGSFTRIALACLLGYVLDREADLEEEKLVDVHPAYKTYKEEVSKFLPSV 444
S LQL K +++P P L T G+Y RHP+Y+GL++F+LG F S+ +IA+A +L + + + EE+KL+ Y YK++V++F P +
Sbjct: 53 SVLQLNKNLTVFPTPKTDSELITFGMYKFSRHPIYSGLILFTLGYAFFKASYFKIAIALILLLLFYFKTNYEEQKLLQKFSNYNDYKKKVNRFFPKI 149 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92600.16713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig92600.16713.1 >prot_H-elongata_contig92600.16713.1 ID=prot_H-elongata_contig92600.16713.1|Name=mRNA_H-elongata_contig92600.16713.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp MDSRTVRPPAARPPWQPAHPRWFTGGRRGARLVARRGWASGGEFPPAGKDback to top mRNA from alignment at H-elongata_contig92600:67..1485- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig92600.16713.1 ID=mRNA_H-elongata_contig92600.16713.1|Name=mRNA_H-elongata_contig92600.16713.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1419bp|location=Sequence derived from alignment at H-elongata_contig92600:67..1485- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig92600:67..1485- >mRNA_H-elongata_contig92600.16713.1 ID=mRNA_H-elongata_contig92600.16713.1|Name=mRNA_H-elongata_contig92600.16713.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=840bp|location=Sequence derived from alignment at H-elongata_contig92600:67..1485- (Himanthalia elongata Himel1 dioecious)back to top |