prot_H-elongata_contig92582.16712.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig92582.16712.1
Unique Nameprot_H-elongata_contig92582.16712.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
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BLAST of mRNA_H-elongata_contig92582.16712.1 vs. uniprot
Match: D7FYJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ7_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 8.810e-23
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 0 
Query:    1 GAELILRAGEAVVRAAGAMAATGLQEQGPEFAALQAAALGAIAALLPGLAASSDG-SNIIAIAEAVVSLVRRCWEGRAGERGGN 83
            G  L++RAGEAVVRAA  MA+ GL  +GPEFAALQAAAL A+  LLPGLAA SDG +N  AIAEAVV+LVR CWE  A E GG+
Sbjct:   19 GRGLLMRAGEAVVRAAATMASAGLHVRGPEFAALQAAALSAVGGLLPGLAAGSDGDNNATAIAEAVVALVRSCWESAASEGGGD 102
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BLAST of mRNA_H-elongata_contig92582.16712.1 vs. uniprot
Match: A0A6H5KJI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI2_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.920e-20
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0 
Query:    1 GAELILRAGEAVVRAAGAMAATGLQEQGPEFAALQAAALGAIAALLPGLAASSDG-SNIIAIAEAVVSLVRRCWE 74
            G  L++RAGEAVVRAAG MA+ GL  +GPEFAALQAAAL A+  LLPGLAA  DG SN  AIAEAVV+LVR CWE
Sbjct:   22 GRGLLMRAGEAVVRAAGTMASAGLHVRGPEFAALQAAALSAVGGLLPGLAAGGDGDSNATAIAEAVVALVRSCWE 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92582.16712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYJ7_ECTSI8.810e-2367.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJI2_9PHAE3.920e-2072.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig92582contigH-elongata_contig92582:384..2060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig92582.16712.1mRNA_H-elongata_contig92582.16712.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig92582 384..2060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig92582.16712.1 ID=prot_H-elongata_contig92582.16712.1|Name=mRNA_H-elongata_contig92582.16712.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
GAELILRAGEAVVRAAGAMAATGLQEQGPEFAALQAAALGAIAALLPGLA
ASSDGSNIIAIAEAVVSLVRRCWEGRAGERGGNVV
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