prot_H-elongata_contig9251.16704.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9251.16704.1
Unique Nameprot_H-elongata_contig9251.16704.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length825
Homology
BLAST of mRNA_H-elongata_contig9251.16704.1 vs. uniprot
Match: A0A6H5L8B1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B1_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 2.330e-85
Identity = 309/986 (31.34%), Postives = 418/986 (42.39%), Query Frame = 0
Query:    1 MDLSNTVALVEVTVMVEREKIKAAVAAAAASRTQHLRTLGESQVIEVQPQSERRYPGVAAERMLASLKLWTLDVEEPHNGWGPDGPPGGVCKDSAEGCASSWWAKLPTLNSFRWSFDPED-LVRGRCLPDELPIELRRLITALRFKSSVDDFLLGQVEHALACSSLP--EESVRNIHEEQLNSLFAENAYGILRHIADD-----FAGVGRVDRERRDVPVVSRHVISVELGADEDPLLLEPLP---RPGDCSVAVAAASAVVEATAKCTLVGAEAEGPT----------ATAWFHAIRAPIPLRNR----------------------------VAIHTAPYDIIRPAFDAGFV------------------TSREEETGRYPPRTDSEVEPGS-ALLWELWRHSEAYGLTPLPTNSSFDRPVMSGVIMARQ--------------KDGRL---------------ESRADGRGTKAAGDECEDFPSVCTILLTAPDGEHTIIPR----SQRGDAVAAASYDTPKEGELFERRLDALLYVIPSSTRNFCRSWGDRMATPSALSSGVYSGGGSWAAELRSEQSSTSRPDPLEVVEQAKKMAEGTLRLALLHPRRNMIWSVF-QDAAVVALKQARVDVPRTPRTTAGSRPGRRVADRLP------------------------------RAPSPASFQETVIDDASGEHRVSFASHGFSEGT--PRIGREDLRRLLELSFVTPLGVADPTLCNILDPKHGVDWEGWFKHLVTDSPSMCTLVVDEDDAVQGQSEPAPGFTTGTAAKTNDVSKLSSGTVGCFGSESEGGDAIDARSMERT---LVIIPKNILERERGVGEGASSNAQKFTGRGSGGEGSW-------------------------VGPYAGGVPIFSGGAARRAPS--EVFSLLLCVTLDEEKKTVDVDVVRKMYSPALTGAERVALTVFVNDMLAWCTRDILGGKSNAV 822
            ++L+NTVALVEV+VMV      AA A         LR+               R P      M AS+K WTLDV EP  GW  DGP GG  +   +G   SWWA LPTL+SF+W+ DP +    G  LPDELP E+ R+I  LR +++V+DFL+GQVE AL  S+    E +     +EQL  LFA NA+GIL  +A +     F G    D +  D P V+R VIS+EL A+  PLL E  P   RP     A  +   VV A A     G +A  P           A +    IRAPIP R                                 H  P D   P      V                  T      G     T++EV+  +   +W L+R++E YGLT  PT  S  RP++SG IMAR+              +DGR                E+ A  + TK      E FP VCT +LT  D       R    S  GD   AA+ D           LD +L+V+  +    CRSW                G G+ A  +         P P ++ +QA ++ E  LRLA+   R++  W +F QD     L +  + +P + R    S P  +    LP                              RAPSPA    ++    +G     + + G  EG+  P +   +LR LLE+S VTPLGVA PTL  I+DP+HGVDW GWF+HL   SP+  T+V ++ D V   +    G     A    +  +   G +        GG+    RS  RT   L+ +P  +  RE GV E    N +     G GG+G                           VGP+ G + + +   +R + S  +  SLL CV L +E  TVDVD+V++     LT  ER A++ F +DML WCT DIL     A+
Sbjct:  937 LELTNTVALVEVSVMVAPRTSTAAAA---------LRS---------------RQP------MQASVKFWTLDVMEPSGGWEGDGPIGGSVE--GQGAPKSWWANLPTLSSFKWNLDPNNPTFHGTELPDELPHEMYRVIRKLRLRNAVEDFLVGQVEAALMSSAATDLETAADAPPKEQLRILFAINAHGILSRMAAENDAAYFEGSRPCDND--DPPAVTREVISIELDAERGPLLSEASPSPRRPSAARSAPVSPGPVVVAPALALRGGEDATTPARGXXXXXXXXAGSKTTPIRAPIPRRQHRESPYLGGSRPQEQHQQHPQEYDQGHGHERAHLHPSDSRSPISPTPLVGGESSGMTIDGSAGGIGGTGCGHGGGEVEDDTETEVDAETNRFMWHLYRNAELYGLTSQPTLQSATRPILSGTIMARELAMGSSSTCTGTHGEDGRAMVDNSAERGEEGGMRETTAGAKRTKP-----ETFP-VCTFVLTTLDDHDKRATRRAKSSGNGDDRTAAAVDGS---------LDVVLFVVEGARPMSCRSW---------------EGEGTAATSVSGRDWWNDGPFPEDIAQQASQLVERLLRLAIAKRRKDTAWELFNQDNPWWPLYKNAMVLP-SRREERTSSPAPQAVPPLPDSWHPPLAWLSPPPQVAAGASSRHHETPFLRAPSPALSFTSI---GTGFSLSGYENVGLDEGSILPPVSELNLRDLLEVSVVTPLGVALPTLRGIIDPRHGVDWGGWFQHLAV-SPTFRTIVFEDWDGVLAPAAAPSGCAFNAAFAAVEAEE---GAI--------GGEGAIPRSSSRTRCALLALPM-LPARESGVEEAGDHNVRG----GDGGDGXXXXXXXXXXXXXXXXXDGAVKEDTRGVGPWVGSLSVIADELSRESGSLPQAASLLFCVILHKESNTVDVDIVQREKIARLTKWERAAVSAFADDMLDWCTNDILRTTQEAL 1837          
BLAST of mRNA_H-elongata_contig9251.16704.1 vs. uniprot
Match: D7G8T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T4_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.620e-8
Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 0
Query:  740 VGPYAGGVPIFSGGAARRAPS--EVFSLLLCVTLDEEKKTVDVDVVRKMYSPALTGAERVALTVFVNDMLAWCTRDILGGKSNAV 822
            VGP+ G   + +   +R + S  +  SLL CV L +E  TVDVD+V++     LT  ER A++ F +DML WCT DIL     A+
Sbjct:   51 VGPWVGSSNVIADELSRESGSLPQAASLLFCVILHKESNTVDVDIVQREKIARLTKWERAAVSAFADDMLDWCTNDILRTTQEAL 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9251.16704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8B1_9PHAE2.330e-8531.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8T4_ECTSI2.620e-841.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9251contigH-elongata_contig9251:3288..7007 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9251.16704.1mRNA_H-elongata_contig9251.16704.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9251 2991..8342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9251.16704.1 ID=prot_H-elongata_contig9251.16704.1|Name=mRNA_H-elongata_contig9251.16704.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=825bp
MDLSNTVALVEVTVMVEREKIKAAVAAAAASRTQHLRTLGESQVIEVQPQ
SERRYPGVAAERMLASLKLWTLDVEEPHNGWGPDGPPGGVCKDSAEGCAS
SWWAKLPTLNSFRWSFDPEDLVRGRCLPDELPIELRRLITALRFKSSVDD
FLLGQVEHALACSSLPEESVRNIHEEQLNSLFAENAYGILRHIADDFAGV
GRVDRERRDVPVVSRHVISVELGADEDPLLLEPLPRPGDCSVAVAAASAV
VEATAKCTLVGAEAEGPTATAWFHAIRAPIPLRNRVAIHTAPYDIIRPAF
DAGFVTSREEETGRYPPRTDSEVEPGSALLWELWRHSEAYGLTPLPTNSS
FDRPVMSGVIMARQKDGRLESRADGRGTKAAGDECEDFPSVCTILLTAPD
GEHTIIPRSQRGDAVAAASYDTPKEGELFERRLDALLYVIPSSTRNFCRS
WGDRMATPSALSSGVYSGGGSWAAELRSEQSSTSRPDPLEVVEQAKKMAE
GTLRLALLHPRRNMIWSVFQDAAVVALKQARVDVPRTPRTTAGSRPGRRV
ADRLPRAPSPASFQETVIDDASGEHRVSFASHGFSEGTPRIGREDLRRLL
ELSFVTPLGVADPTLCNILDPKHGVDWEGWFKHLVTDSPSMCTLVVDEDD
AVQGQSEPAPGFTTGTAAKTNDVSKLSSGTVGCFGSESEGGDAIDARSME
RTLVIIPKNILERERGVGEGASSNAQKFTGRGSGGEGSWVGPYAGGVPIF
SGGAARRAPSEVFSLLLCVTLDEEKKTVDVDVVRKMYSPALTGAERVALT
VFVNDMLAWCTRDILGGKSNAVGN*
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