prot_H-elongata_contig92406.16695.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig92406.16695.1
Unique Name	prot_H-elongata_contig92406.16695.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	209

Homology

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: D7G350_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G350_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.020e-104
Identity = 142/184 (77.17%), Postives = 155/184 (84.24%), Query Frame = 0

Query:   27 GMVVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGG-GSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINATDGVME 209
            G V+ VCPNMC+GHGECG EN C+CE  WD+VADCSLK CPTG SWGSKAY EN AHVVMECSNVGVCDR  GSC CP+GYTG+ACQRLACPN+CSG+G C TL QA+     EFYG T  GG GSF YTNWEADM+MTCICDWGYTGGDCSLRMCPKGDDP+TTLQ  P V+MT+NATDGVME
Sbjct:   31 GEVLAVCPNMCNGHGECGLENVCECETGWDLVADCSLKECPTGVSWGSKAYEENTAHVVMECSNVGVCDRVTGSCSCPSGYTGSACQRLACPNDCSGRGTCATLGQAA-----EFYGVTRYGGVGSFVYTNWEADMVMTCICDWGYTGGDCSLRMCPKGDDPVTTLQESPRVAMTVNATDGVME 209

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A836CFV3_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV3_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.860e-68
Identity = 101/194 (52.06%), Postives = 129/194 (66.49%), Query Frame = 0

Query:   19 VFLICCRVGMVVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAY-AENE--AHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASN---YDAG---EFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 203
            + L+    G+    CPN CSGHG+CG  N CKC+ DW++  DCSL++CP+G SW S  Y A N+  AH   ECSNVG C+R  G+C CPA +TG+ACQRL CPN+CS  G C TL QAS    Y  G   +F GT   G   + Y NW+AD   TCICDWG+TG DCS++MCPKGDDP+TT Q+ P+ ++ I +
Sbjct:    5 LLLLLATCGISWAACPNFCSGHGDCGKHNVCKCDADWNVAPDCSLRSCPSGTSWASNTYMASNKVVAHTAFECSNVGTCNRKTGTCTCPAPFTGSACQRLQCPNDCSEHGFCATLRQASEFYTYAGGSDPDFAGT-GPGSALYIYDNWDADSSTTCICDWGFTGADCSMKMCPKGDDPVTTAQDPPTFTVDIQS 197

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A7S2WIH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIH4_9STRA)

HSP 1 Score: 206 bits (524), Expect = 6.650e-62
Identity = 85/171 (49.71%), Postives = 112/171 (65.50%), Query Frame = 0

Query:   33 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSF--TYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTI 201
            CPN CSGHG CG EN C C++ W ++ DCS + CP   +W  +AY+++ AH + ECS  G+CDR QG+C C  GYTGAACQR  CPN+CSG G C+TL      +  ++      GG      YTNW+AD +  C CDWG+ G DCSLRMCPKGDDP+T  Q + ++S+ +
Sbjct:   49 CPNQCSGHGACGNENVCTCDDGWVVMPDCSERQCPYDRAWADRAYSDDAAHTLAECSGAGLCDRAQGTCTCFDGYTGAACQRARCPNDCSGHGLCITLGALGRLEGNDYSARPGVGGDGIGPEYTNWDADHVTMCNCDWGFFGPDCSLRMCPKGDDPLTVDQGYRAISVRL 219

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A835ZG45_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG45_9STRA)

HSP 1 Score: 199 bits (507), Expect = 4.770e-61
Identity = 86/173 (49.71%), Postives = 106/173 (61.27%), Query Frame = 0

Query:   32 VCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINAT 204
            VCPN CSGHG CGPEN C C + W    DCSL+ CP GA+W  KAYA ++AH  +ECS  G+CD   G C+C   Y G+ACQRL CPN+CS  G C+T+A    Y     YG         TY NW+ D    C+CD GY G DC+ RMCPKGDDP+T  Q    + + I++T
Sbjct:   20 VCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRY-----YGALGS-----TYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISST 182

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A0A7CM32_9STRA (Secreted protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CM32_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.790e-60
Identity = 94/189 (49.74%), Postives = 110/189 (58.20%), Query Frame = 0

Query:   22 ICCRVGMVVGV-------CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 203
            IC  +G++  +       C N CSGHG CG  NKC C   W    DCS K CPTG +W  KA   N AH  MECSN GVCD + G C C  G+TG ACQR  C N CSG G C T+A       G  YG     G    YTNWE   +M+C CD+GY G DCSLRMCPK DDP+TT Q + +VS+T+ A
Sbjct:    3 ICVLLGLLASIWTGVDATCANFCSGHGTCGGANKCTCFPGWTGAPDCSRKVCPTGTAWADKASGTNVAHSAMECSNRGVCDYSTGVCMCTTGFTGNACQRRVCLNNCSGHGTCQTMAMM-----GLMYGPDVGTGKGPAYTNWEQSSMMSCFCDYGYQGPDCSLRMCPKNDDPLTTGQGYRTVSLTLAA 186

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A024UNZ1_9STRA (EGF-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNZ1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.090e-60
Identity = 97/174 (55.75%), Postives = 121/174 (69.54%), Query Frame = 0

Query:   33 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHV-VMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYG--TTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 203
            C NMCSGHG CG  NKC C+  W++V DCS   CP+G +W  KA A N AH  VMECSN G+CD ++GSC C  GYTG ACQR+ CPN+CSG+G CLTL+  +       YG  T + G G   YTNWE D IM+C CD G+TG DCS+RMCPK DDP+TT Q + S+++T++A
Sbjct:   24 CANMCSGHGTCGMSNKCTCDAQWNVVPDCSRHVCPSGVAWVDKASAPNGAHATVMECSNRGICDYSKGSCICAEGYTGDACQRMRCPNDCSGRGQCLTLSTLAR-----LYGPQTPATGLGPI-YTNWEKDSIMSCYCDMGFTGPDCSMRMCPKNDDPLTTSQVYRSIALTVSA 191

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A8K1CGE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGE0_PYTOL)

HSP 1 Score: 209 bits (532), Expect = 8.120e-59
Identity = 94/177 (53.11%), Postives = 110/177 (62.15%), Query Frame = 0

Query:   29 VVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQ-ASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINAT 204
            V   CPN CSGHG CG  N+C C+  W    DCSL+ CP+G +W  KA   N+AH   ECSN G+CD T+G C C  GYTGAACQRL CPN+CSG G C +LA  A  Y      G   DG G   Y NWE D + TC CD GY G DCS RMCPK DDP+TTLQ + ++ +T   T
Sbjct:   13 VSATCPNFCSGHGTCGASNQCTCDTAWSAAPDCSLRKCPSGVAWSDKASTTNKAHATAECSNRGMCDYTKGECMCFNGYTGAACQRLRCPNDCSGHGLCYSLATLAREYGPDSLPGVGGDGVGP-NYQNWEKDSMSTCFCDTGYNGPDCSQRMCPKNDDPLTTLQGYRTIKITTGGT 188

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A6A4XYA5_9STRA (EGF-like domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XYA5_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.010e-56
Identity = 99/192 (51.56%), Postives = 121/192 (63.02%), Query Frame = 0

Query:   18 IVFLICCRVG----MVVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHV-VMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGG-SFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 203
            + +L+ C  G    +V G C NMCSGHG CG  N C C+  W++V DCS +ACP G +W  KA A N AH    ECS  GVCD +QG+C C  GYTG ACQR  CPN CSG G CL LA  +       YG  S   G   TYTNWEA+ +  C CD GYTG DCS+RMCPK DDP+TT Q++ ++S+T+ A
Sbjct:    8 VFWLLLCLSGTSFLVVDGACANMCSGHGTCGAANSCTCDSAWNVVPDCSRRACPKGVAWVDKASAANVAHASATECSGRGVCDYSQGTCICAPGYTGEACQRSQCPNTCSGHGLCLPLASLAL-----LYGPQSSTTGIGPTYTNWEANEVGGCYCDMGYTGPDCSMRMCPKNDDPLTTGQSYRTISLTVAA 194

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: D8LFY3_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY3_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 5.590e-56
Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 0

Query:   33 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFY--GTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTI 201
            CPN CSGHG CGP  KC C   WD   DCSL+ C  G +W  KAYA + AH  +ECSN G+CDR  G C C + +TGAACQR  CP +CSG G C+T+A  S +   ++   GT  DG G  +Y NW+A     C CD G+ G DCS RMCPK DDP+T  Q+  S+ +++
Sbjct:   28 CPNHCSGHGTCGPGAKCTCNSGWDFAPDCSLRTCSKGVAWADKAYATDIAHSEVECSNAGICDRDTGICSCFSPFTGAACQRARCPGDCSGHGTCMTIADMSRFYGPDYTQPGTGGDGIGP-SYGNWDAQSTTACYCDQGHFGADCSNRMCPKADDPVTVNQDDRSIFISV 197

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BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A6G0KY74_9STRA (EGF-like domain-containing protein (Fragment) n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KY74_9STRA)

HSP 1 Score: 200 bits (508), Expect = 6.700e-56
Identity = 88/171 (51.46%), Postives = 110/171 (64.33%), Query Frame = 0

Query:   33 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 203
            C N CSGHG CG  N+C C+ DW +  DCSL+ CPTG +W  KA   N AH V ECSN GVCD ++G C C  GYTGAACQRL CP++CSG G C + A  ++      YG +S  G   TYTNWE D + +C+CD GY G DCS  MC K DDP+TT Q + ++ + + A
Sbjct:   26 CANSCSGHGRCGASNQCTCDADWALAPDCSLRKCPTGVAWTDKAKTANAAHAVAECSNRGVCDYSKGECTCFNGYTGAACQRLRCPSDCSGHGLCYSSATLASQ-----YGPSSLAGSGPTYTNWEKDSMTSCMCDMGYNGPDCSQFMCAKNDDPLTTGQAYRTIQIAVGA 191

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot

BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G350_ECTSI	1.020e-104	77.17	EGF-like domain-containing protein n=1 Tax=Ectocar...	[more]
A0A836CFV3_9STRA	2.860e-68	52.06	EGF-like domain-containing protein n=1 Tax=Tribone...	[more]
A0A7S2WIH4_9STRA	6.650e-62	49.71	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A835ZG45_9STRA	4.770e-61	49.71	EGF-like domain-containing protein n=1 Tax=Tribone...	[more]
A0A0A7CM32_9STRA	1.790e-60	49.74	Secreted protein n=1 Tax=Thraustotheca clavata Tax...	[more]
A0A024UNZ1_9STRA	4.090e-60	55.75	EGF-like domain-containing protein n=1 Tax=Aphanom...	[more]
A0A8K1CGE0_PYTOL	8.120e-59	53.11	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A6A4XYA5_9STRA	2.010e-56	51.56	EGF-like domain-containing protein (Fragment) n=1 ...	[more]
D8LFY3_ECTSI	5.590e-56	49.71	EGF-like domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6G0KY74_9STRA	6.700e-56	51.46	EGF-like domain-containing protein (Fragment) n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013111	EGF-like domain, extracellular	PFAM	PF07974	EGF_2	coord: 87..112 e-value: 1.1E-6 score: 28.9
None	No IPR available	GENE3D	2.10.25.10		coord: 70..181 e-value: 6.8E-7 score: 31.3
None	No IPR available	PANTHER	PTHR24035	MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN	coord: 60..190
None	No IPR available	PANTHER	PTHR24035:SF109	INTEGRIN BETA-LIKE PROTEIN C	coord: 60..190
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..209
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 11..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..10
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..31 score: 0.862
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR013032	EGF-like, conserved site	PROSITE	PS00022	EGF_1	coord: 101..112
IPR013032	EGF-like, conserved site	PROSITE	PS01186	EGF_2	coord: 101..112
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 78..113 score: 11.008

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig92406	contig	H-elongata_contig92406:1093..2569 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig92406.16695.1	mRNA_H-elongata_contig92406.16695.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig92406 1093..2569 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig92406.16695.1 ID=prot_H-elongata_contig92406.16695.1|Name=mRNA_H-elongata_contig92406.16695.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp
RRQRRRSKLPLTLAAVLIVFLICCRVGMVVGVCPNMCSGHGECGPENKCK
CEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGS
CECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGG
SFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMT
INATDGVME

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013111	EGF_extracell
IPR013032	EGF-like_CS
IPR000742	EGF-like_dom