mRNA_H-elongata_contig92406.16695.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: D7G350_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G350_ECTSI) HSP 1 Score: 317 bits (811), Expect = 1.020e-104 Identity = 142/184 (77.17%), Postives = 155/184 (84.24%), Query Frame = 1
Query: 79 GMVVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGG-GSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINATDGVME 627
G V+ VCPNMC+GHGECG EN C+CE WD+VADCSLK CPTG SWGSKAY EN AHVVMECSNVGVCDR GSC CP+GYTG+ACQRLACPN+CSG+G C TL QA+ EFYG T GG GSF YTNWEADM+MTCICDWGYTGGDCSLRMCPKGDDP+TTLQ P V+MT+NATDGVME
Sbjct: 31 GEVLAVCPNMCNGHGECGLENVCECETGWDLVADCSLKECPTGVSWGSKAYEENTAHVVMECSNVGVCDRVTGSCSCPSGYTGSACQRLACPNDCSGRGTCATLGQAA-----EFYGVTRYGGVGSFVYTNWEADMVMTCICDWGYTGGDCSLRMCPKGDDPVTTLQESPRVAMTVNATDGVME 209
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A836CFV3_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV3_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.860e-68 Identity = 101/194 (52.06%), Postives = 129/194 (66.49%), Query Frame = 1
Query: 55 VFLICCRVGMVVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAY-AENE--AHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASN---YDAG---EFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 609
+ L+ G+ CPN CSGHG+CG N CKC+ DW++ DCSL++CP+G SW S Y A N+ AH ECSNVG C+R G+C CPA +TG+ACQRL CPN+CS G C TL QAS Y G +F GT G + Y NW+AD TCICDWG+TG DCS++MCPKGDDP+TT Q+ P+ ++ I +
Sbjct: 5 LLLLLATCGISWAACPNFCSGHGDCGKHNVCKCDADWNVAPDCSLRSCPSGTSWASNTYMASNKVVAHTAFECSNVGTCNRKTGTCTCPAPFTGSACQRLQCPNDCSEHGFCATLRQASEFYTYAGGSDPDFAGT-GPGSALYIYDNWDADSSTTCICDWGFTGADCSMKMCPKGDDPVTTAQDPPTFTVDIQS 197
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A7S2WIH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIH4_9STRA) HSP 1 Score: 206 bits (524), Expect = 6.650e-62 Identity = 85/171 (49.71%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 97 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSF--TYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTI 603
CPN CSGHG CG EN C C++ W ++ DCS + CP +W +AY+++ AH + ECS G+CDR QG+C C GYTGAACQR CPN+CSG G C+TL + ++ GG YTNW+AD + C CDWG+ G DCSLRMCPKGDDP+T Q + ++S+ +
Sbjct: 49 CPNQCSGHGACGNENVCTCDDGWVVMPDCSERQCPYDRAWADRAYSDDAAHTLAECSGAGLCDRAQGTCTCFDGYTGAACQRARCPNDCSGHGLCITLGALGRLEGNDYSARPGVGGDGIGPEYTNWDADHVTMCNCDWGFFGPDCSLRMCPKGDDPLTVDQGYRAISVRL 219
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A835ZG45_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG45_9STRA) HSP 1 Score: 199 bits (507), Expect = 4.770e-61 Identity = 86/173 (49.71%), Postives = 106/173 (61.27%), Query Frame = 1
Query: 94 VCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINAT 612
VCPN CSGHG CGPEN C C + W DCSL+ CP GA+W KAYA ++AH +ECS G+CD G C+C Y G+ACQRL CPN+CS G C+T+A Y YG TY NW+ D C+CD GY G DC+ RMCPKGDDP+T Q + + I++T
Sbjct: 20 VCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRY-----YGALGS-----TYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISST 182
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A0A7CM32_9STRA (Secreted protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CM32_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.790e-60 Identity = 94/189 (49.74%), Postives = 110/189 (58.20%), Query Frame = 1
Query: 64 ICCRVGMVVGV-------CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 609
IC +G++ + C N CSGHG CG NKC C W DCS K CPTG +W KA N AH MECSN GVCD + G C C G+TG ACQR C N CSG G C T+A G YG G YTNWE +M+C CD+GY G DCSLRMCPK DDP+TT Q + +VS+T+ A
Sbjct: 3 ICVLLGLLASIWTGVDATCANFCSGHGTCGGANKCTCFPGWTGAPDCSRKVCPTGTAWADKASGTNVAHSAMECSNRGVCDYSTGVCMCTTGFTGNACQRRVCLNNCSGHGTCQTMAMM-----GLMYGPDVGTGKGPAYTNWEQSSMMSCFCDYGYQGPDCSLRMCPKNDDPLTTGQGYRTVSLTLAA 186
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A024UNZ1_9STRA (EGF-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNZ1_9STRA) HSP 1 Score: 210 bits (534), Expect = 4.090e-60 Identity = 97/174 (55.75%), Postives = 121/174 (69.54%), Query Frame = 1
Query: 97 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHV-VMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYG--TTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 609
C NMCSGHG CG NKC C+ W++V DCS CP+G +W KA A N AH VMECSN G+CD ++GSC C GYTG ACQR+ CPN+CSG+G CLTL+ + YG T + G G YTNWE D IM+C CD G+TG DCS+RMCPK DDP+TT Q + S+++T++A
Sbjct: 24 CANMCSGHGTCGMSNKCTCDAQWNVVPDCSRHVCPSGVAWVDKASAPNGAHATVMECSNRGICDYSKGSCICAEGYTGDACQRMRCPNDCSGRGQCLTLSTLAR-----LYGPQTPATGLGPI-YTNWEKDSIMSCYCDMGFTGPDCSMRMCPKNDDPLTTSQVYRSIALTVSA 191
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A8K1CGE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGE0_PYTOL) HSP 1 Score: 209 bits (532), Expect = 8.120e-59 Identity = 94/177 (53.11%), Postives = 110/177 (62.15%), Query Frame = 1
Query: 85 VVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQ-ASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINAT 612
V CPN CSGHG CG N+C C+ W DCSL+ CP+G +W KA N+AH ECSN G+CD T+G C C GYTGAACQRL CPN+CSG G C +LA A Y G DG G Y NWE D + TC CD GY G DCS RMCPK DDP+TTLQ + ++ +T T
Sbjct: 13 VSATCPNFCSGHGTCGASNQCTCDTAWSAAPDCSLRKCPSGVAWSDKASTTNKAHATAECSNRGMCDYTKGECMCFNGYTGAACQRLRCPNDCSGHGLCYSLATLAREYGPDSLPGVGGDGVGP-NYQNWEKDSMSTCFCDTGYNGPDCSQRMCPKNDDPLTTLQGYRTIKITTGGT 188
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A6A4XYA5_9STRA (EGF-like domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XYA5_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.010e-56 Identity = 99/192 (51.56%), Postives = 121/192 (63.02%), Query Frame = 1
Query: 52 IVFLICCRVG----MVVGVCPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHV-VMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGG-SFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 609
+ +L+ C G +V G C NMCSGHG CG N C C+ W++V DCS +ACP G +W KA A N AH ECS GVCD +QG+C C GYTG ACQR CPN CSG G CL LA + YG S G TYTNWEA+ + C CD GYTG DCS+RMCPK DDP+TT Q++ ++S+T+ A
Sbjct: 8 VFWLLLCLSGTSFLVVDGACANMCSGHGTCGAANSCTCDSAWNVVPDCSRRACPKGVAWVDKASAANVAHASATECSGRGVCDYSQGTCICAPGYTGEACQRSQCPNTCSGHGLCLPLASLAL-----LYGPQSSTTGIGPTYTNWEANEVGGCYCDMGYTGPDCSMRMCPKNDDPLTTGQSYRTISLTVAA 194
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: D8LFY3_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY3_ECTSI) HSP 1 Score: 193 bits (490), Expect = 5.590e-56 Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 97 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFY--GTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTI 603
CPN CSGHG CGP KC C WD DCSL+ C G +W KAYA + AH +ECSN G+CDR G C C + +TGAACQR CP +CSG G C+T+A S + ++ GT DG G +Y NW+A C CD G+ G DCS RMCPK DDP+T Q+ S+ +++
Sbjct: 28 CPNHCSGHGTCGPGAKCTCNSGWDFAPDCSLRTCSKGVAWADKAYATDIAHSEVECSNAGICDRDTGICSCFSPFTGAACQRARCPGDCSGHGTCMTIADMSRFYGPDYTQPGTGGDGIGP-SYGNWDAQSTTACYCDQGHFGADCSNRMCPKADDPVTVNQDDRSIFISV 197
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Match: A0A6G0KY74_9STRA (EGF-like domain-containing protein (Fragment) n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KY74_9STRA) HSP 1 Score: 200 bits (508), Expect = 6.700e-56 Identity = 88/171 (51.46%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 97 CPNMCSGHGECGPENKCKCEEDWDMVADCSLKACPTGASWGSKAYAENEAHVVMECSNVGVCDRTQGSCECPAGYTGAACQRLACPNECSGQGACLTLAQASNYDAGEFYGTTSDGGGSFTYTNWEADMIMTCICDWGYTGGDCSLRMCPKGDDPITTLQNHPSVSMTINA 609
C N CSGHG CG N+C C+ DW + DCSL+ CPTG +W KA N AH V ECSN GVCD ++G C C GYTGAACQRL CP++CSG G C + A ++ YG +S G TYTNWE D + +C+CD GY G DCS MC K DDP+TT Q + ++ + + A
Sbjct: 26 CANSCSGHGRCGASNQCTCDADWALAPDCSLRKCPTGVAWTDKAKTANAAHAVAECSNRGVCDYSKGECTCFNGYTGAACQRLRCPSDCSGHGLCYSSATLASQ-----YGPSSLAGSGPTYTNWEKDSMTSCMCDMGYNGPDCSQFMCAKNDDPLTTGQAYRTIQIAVGA 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92406.16695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig92406.16695.1 >prot_H-elongata_contig92406.16695.1 ID=prot_H-elongata_contig92406.16695.1|Name=mRNA_H-elongata_contig92406.16695.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp RRQRRRSKLPLTLAAVLIVFLICCRVGMVVGVCPNMCSGHGECGPENKCKback to top mRNA from alignment at H-elongata_contig92406:1093..2569+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig92406.16695.1 ID=mRNA_H-elongata_contig92406.16695.1|Name=mRNA_H-elongata_contig92406.16695.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1477bp|location=Sequence derived from alignment at H-elongata_contig92406:1093..2569+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig92406:1093..2569+ >mRNA_H-elongata_contig92406.16695.1 ID=mRNA_H-elongata_contig92406.16695.1|Name=mRNA_H-elongata_contig92406.16695.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1254bp|location=Sequence derived from alignment at H-elongata_contig92406:1093..2569+ (Himanthalia elongata Himel1 dioecious)back to top |