prot_H-elongata_contig121779.1665.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: A0A6H5L5U7_9PHAE (SRP54 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U7_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.680e-24 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
Query: 1 QVASAADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
QVAS ADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTK+DGDTRGGAALSVQ
Sbjct: 48 QVASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQ 102
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: D8LN22_ECTSI (PFfh, plastid Ffh subunit of the signal recognition particle n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN22_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 8.770e-22 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
Query: 1 QVASAADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
QVAS ADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTK+DGDTRGGAALSVQ
Sbjct: 305 QVASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQ 359
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: C1FE02_MICCC (Type II secretory pathway family n=2 Tax=Micromonas TaxID=38832 RepID=C1FE02_MICCC) HSP 1 Score: 82.0 bits (201), Expect = 6.880e-17 Identity = 42/55 (76.36%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 1 QVASAADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
++A+AADE+LLVVDAMTGQEAA L + F+E +GITGAVLTK+DGDTRGGAALSV+
Sbjct: 294 KIATAADEILLVVDAMTGQEAAALTAAFDEAVGITGAVLTKMDGDTRGGAALSVR 348
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR) HSP 1 Score: 81.6 bits (200), Expect = 8.750e-17 Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0
Query: 4 SAADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
S ADE LLVVDAMTGQEAATL FN+++GITGA+LTKLDGDTRGGAALSVQ
Sbjct: 197 SKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQ 248
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: A0A835YMH5_9STRA (SRP54-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 9.420e-17 Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 0
Query: 7 DEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
DEVLLVVDAMTGQEAATL + FNE++GITGA+LTKLDGD+RGG+ALSVQ
Sbjct: 303 DEVLLVVDAMTGQEAATLTAAFNERVGITGAILTKLDGDSRGGSALSVQ 351
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR) HSP 1 Score: 80.9 bits (198), Expect = 1.680e-16 Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = 0
Query: 7 DEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
DE LLVVDAMTGQEAATL FNE++GITGA+LTKLDGDTRGGAALSVQ
Sbjct: 216 DETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQ 264
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: B4VXP3_9CYAN (Signal recognition particle protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VXP3_9CYAN) HSP 1 Score: 80.9 bits (198), Expect = 1.690e-16 Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0
Query: 7 DEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
DEVLLVVDAMTGQEAATL FN++IGITGA+LTKLDGDTRGGAALSV+
Sbjct: 214 DEVLLVVDAMTGQEAATLTHTFNQQIGITGAILTKLDGDTRGGAALSVR 262
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: A0A7S0VH70_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VH70_9CRYP) HSP 1 Score: 79.3 bits (194), Expect = 3.900e-16 Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0
Query: 7 DEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
DEVLLVVDAMTGQEAA L FN+ +GITGAVLTKLDGDTRGGAALSVQ
Sbjct: 299 DEVLLVVDAMTGQEAANLTKSFNDAVGITGAVLTKLDGDTRGGAALSVQ 347
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: A0A7S0TI92_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TI92_HEMAN) HSP 1 Score: 79.3 bits (194), Expect = 5.630e-16 Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0
Query: 7 DEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
DEVLLVVDAMTGQEAA L FN+ +GITGAVLTKLDGDTRGGAALSVQ
Sbjct: 305 DEVLLVVDAMTGQEAANLTKSFNDAVGITGAVLTKLDGDTRGGAALSVQ 353
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Match: A0A1X6NS89_PORUM (SRP54 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS89_PORUM) HSP 1 Score: 77.8 bits (190), Expect = 7.900e-16 Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
Query: 7 DEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKLDGDTRGGAALSVQ 55
DE LLVVDAMTGQEAA L FN+ +GITGA+LTKLDGDTRGGAALSVQ
Sbjct: 14 DETLLVVDAMTGQEAANLTRAFNDDVGITGAILTKLDGDTRGGAALSVQ 62 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121779.1665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig121779.1665.1 ID=prot_H-elongata_contig121779.1665.1|Name=mRNA_H-elongata_contig121779.1665.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bpback to top |