mRNA_H-elongata_contig9177.16633.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9177.16633.1
Unique NamemRNA_H-elongata_contig9177.16633.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: D8LCB7_ECTSI (All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB7_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.840e-85
Identity = 157/225 (69.78%), Postives = 184/225 (81.78%), Query Frame = 1 
Query:  262 SAKKAKARRGA-PTIPLNKKTTPAELSQEVSKSVVAEVLGGQDAGRG-SSSNQLAAREAIEKMEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARKANRYQRRQMRKTD 930
            +AKKAKAR GA P + L K     +  QEVSKSVVAEVLG Q A  G ++++Q++AR+ IE+ME EE+ERIA+R+ RI +V++ KAA E DP AGSIPE+VSNRML RMVPFF+LPALGGVGVFV VYVLS  Y+YTIPAYIVAY TQAPF VAL GITYAI+S+SWDEDREGTF GF+EAKRN GNI +GL+RSSDRMDVEDM+AD+E    NR QRRQMRK D
Sbjct:   93 AAKKAKARGGAGPAVELKKAAN--KQPQEVSKSVVAEVLGAQAAKEGGATADQVSARKEIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFVLPALGGVGVFVTVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMSMNRRQRRQMRKED 315
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BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A6H5L0S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S3_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 2.210e-82
Identity = 151/211 (71.56%), Postives = 178/211 (84.36%), Query Frame = 1 
Query:  253 SRRSAKKAKARRGA-PTIPLNKKTTPAELSQEVSKSVVAEVLGGQDAGRG-SSSNQLAAREAIEKMEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADE 879
            SR+++KKAKAR GA P + L K     +  QEVSKSVVAEVLG Q A  G S+++Q++AR+AIE+ME EE+ERIA+R+ RI +V++ KAA E DP AGSIPE+VSNRML RMVPFFLLPALGGVGVFVAVYVLS  Y+YTIPAYIVAY TQAPF VAL GITYAI+S+SWDEDREGTF GF+EAKRN GNI +GL+RSSDRMDVEDM+AD+
Sbjct:   90 SRKASKKAKARGGAGPAVELKKAAN--KQPQEVSKSVVAEVLGAQAAKEGGSTADQVSARKAIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQ 298
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BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A835Z7Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y5_9STRA)

HSP 1 Score: 155 bits (392), Expect = 5.700e-40
Identity = 79/168 (47.02%), Postives = 125/168 (74.40%), Query Frame = 1 
Query:  418 AAREAIEKMEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARKANRYQRRQMR 921
            AA+E + +M+ E + R+  +K R+A++   +A  +++P AG IP++V+NRML RM+PFF+LP L GVGVFV  +VL+K Y+ +    +VA+ TQAPF ++L+GITYAILS+SWD +REG+ LGF+E + N G I +GL+RSS+R ++++ + ++E R  NR +RR+ +
Sbjct:   94 AAKEDLARMKEERERRVQAQKQRMADIKAAQAITKDNPDAGVIPDLVANRMLARMIPFFVLPVLAGVGVFVYFFVLAKRYDTSFQPGMVAFATQAPFAISLVGITYAILSASWDPEREGSALGFDEFRSNAGAILEGLRRSSERQELDEQLEEQEKR-VNRAERRRQK 260
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A6U0UN43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UN43_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.610e-32
Identity = 78/189 (41.27%), Postives = 119/189 (62.96%), Query Frame = 1 
Query:  328 AELSQEVSKSVVAEVLGGQDAGRGSSSNQLAAREAIEKMEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVED-MIADEEARK 891
            A   QE++     EV   Q + R    N  A ++ ++++ +    + AER A++   +EE+A   ++P AG IP+ VS RML RMVP F LP + G+  FVA Y   +     +   +VAY TQAPF + L+G++Y +LS+SWDED EG+FLG EE + NVG ++DG++R+++R D+ED ++A EEA K
Sbjct:   65 APAPQEINVGAAEEVNLAQSSAR---DNLTAGQQELQQLRQARASKDAERAAKVDMYVEERAEIRKNPRAGVIPDAVSKRMLGRMVPLFSLPFVLGIAAFVAFYFYGQKTGNQMQPTVVAYSTQAPFFLGLVGLSYGVLSASWDEDEEGSFLGIEEFQTNVGRLFDGVQRAAERRDLEDEILAREEALK 250
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A7S2STX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.640e-26
Identity = 64/161 (39.75%), Postives = 102/161 (63.35%), Query Frame = 1 
Query:  364 AEVLGGQDAGRGSSSNQLAAREAIEKMEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSD 846
            AE +G +D G   + ++ A  +A+E++  + + +  E + R+ ++ E +    E+P AG IPEVV+ RML RM+P   +P  GG+ +FV  Y+ +  ++  I   +VAY T AP+L+ L G+TY ILS+SWD + EG+FLG EE K N+  I DGL+R+ +
Sbjct:   62 AEAIGDEDLGSAETPSRGA--DALEELRLQSERKGMEVQRRLEDMKEVEKVLRENPDAGVIPEVVAQRMLGRMLPLAAVPIFGGIALFVGFYIAATKWDLEIQPTVVAYATTAPWLLGLAGLTYGILSASWDPEVEGSFLGTEEVKLNLSRIADGLRRAGE 220
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: W7TZB0_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZB0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.670e-23
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 1 
Query:  538 GSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRS 840
            G +PE +SNRMLKR++PF L P LGG+G+F     L+KN E  +P   VA+ TQ PFL AL+GITY+I+S+SW+ + EG+F GF E K NV N+ D L+++
Sbjct:  171 GYLPERISNRMLKRLLPFILFPVLGGIGLFGFYLYLAKNTEIDVPPAFVAFSTQVPFLAALVGITYSIMSTSWEPEVEGSFWGFTEFKANVLNLLDSLQKT 271
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A0G4F121_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F121_VITBC)

HSP 1 Score: 106 bits (264), Expect = 3.240e-22
Identity = 52/114 (45.61%), Postives = 79/114 (69.30%), Query Frame = 1 
Query:  499 LEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRS 840
            L++   A +D +AG++PEVVS R++ R+VPFFL P       F+  ++L   ++Y I   I+AYITQ  FL+AL G++Y ILSSSW+EDREG+F G +E KRN+  +  G++++
Sbjct:  104 LKQLREAGKDGNAGTMPEVVSQRIISRIVPFFLTPLAFAFSTFIGGFLLYSQFDYRIEPSIIAYITQFSFLLALGGVSYGILSSSWEEDREGSFWGADEFKRNIKRVASGVRQT 217
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A7S2BKL3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKL3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.190e-22
Identity = 64/173 (36.99%), Postives = 101/173 (58.38%), Query Frame = 1 
Query:  418 AAREAIEKMEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARKANRYQRRQMRKTDDK 936
            A  E + K+  + +E +A+   R A + E + A +E+P+AG IPE V+NRMLKRM+     P  GG+G+FV  Y+ +  ++  +   IVA  T  P+L+ L G+TY +LS+SWD + EG+ LG +E K N+  I  G+ RS    +  +   + + RK N    R+ R+ D+K
Sbjct:   76 AGAELLTKLRAQREEDLAKADERYAELSEVQEALKENPAAGVIPEAVANRMLKRMLTLAAPPIFGGIGLFVVFYISATQWDTDVAPPIVAAATTVPWLLGLAGLTYGVLSASWDPEVEGSALGLDEFKENLKIIGAGVLRSGQDSEFREQY-EYQQRKNNAPANREQRRQDEK 247
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: R1FQ09_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FQ09_EMIHU)

HSP 1 Score: 105 bits (262), Expect = 6.570e-22
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 1 
Query:  526 DPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKR 837
            DPSAG +PEVVSNRML R+VPF  LP  G   VFV  Y  +   +  +P  ++AY TQA F ++  GIT+ +LS+SWDE+ EG+ LG E+  RNV  + DG+ R
Sbjct:  113 DPSAGVMPEVVSNRMLSRVVPFAGLPVFGSFLVFVGAYYANTQLDLDVPPQVIAYATQACFALSFAGITWGVLSTSWDEETEGSLLGTEQVGRNVAMMRDGMAR 216
[Close]
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Match: A0A7S0LNR7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LNR7_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 2.800e-21
Identity = 65/155 (41.94%), Postives = 91/155 (58.71%), Query Frame = 1 
Query:  424 REAIEKMEREEQERIAERKARIANV-LEEKAAAEEDPSAGSIPEVVSNRMLKRMVPFFLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAILSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEA 885
            R A+EKM  E      ERK R  N  L E+     DP  G +PEVVS RML+R+VPF  LP  G   VF   +  +   E  +P  +VAY TQA F ++  GI++ ++S+SWDE  EG+ LG E+AK+N   + DGL+R   R + E+  A+++A
Sbjct:   98 RAALEKMREEAGIDPLERKTRERNAQLTEEELRPVDPMEGVMPEVVSQRMLRRVVPFAGLPVFGAFLVFGGFWYANTQLELDLPPMLVAYSTQALFFLSFAGISWGVMSTSWDEAEEGSLLGLEQAKKNTAMMRDGLRRG--RAEAEEEYAEDDA 250
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9177.16633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB7_ECTSI1.840e-8569.78All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L0S3_9PHAE2.210e-8271.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7Y5_9STRA5.700e-4047.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U0UN43_9STRA2.610e-3241.27Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2STX2_9STRA1.640e-2639.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TZB0_9STRA2.670e-2352.48Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A0G4F121_VITBC3.240e-2245.61Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2BKL3_9STRA5.190e-2236.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
R1FQ09_EMIHU6.570e-2250.00Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S0LNR7_9EUKA2.800e-2141.94Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9177contigH-elongata_contig9177:311..7955 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score238.8
Seed ortholog evalue1.8e-60
Seed eggNOG ortholog2880.D8LCB7
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Protein of unknown function (DUF3464)
EggNOG OGs2AEZ6@1,2RXKE@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionProtein of unknown function DUF3464
Ec32 orthologEc-14_005350.1
Exons7
Model size1587
Cds size498
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931315.6088839-UTR-H-elongata_contig9177:310..7351622931315.6088839-UTR-H-elongata_contig9177:310..735Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9177 311..735 +
1691679786.2897537-UTR-H-elongata_contig9177:310..7351691679786.2897537-UTR-H-elongata_contig9177:310..735Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9177 311..735 +
1622931315.6290267-UTR-H-elongata_contig9177:4189..42051622931315.6290267-UTR-H-elongata_contig9177:4189..4205Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9177 4190..4205 +
1691679786.300529-UTR-H-elongata_contig9177:4189..42051691679786.300529-UTR-H-elongata_contig9177:4189..4205Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9177 4190..4205 +
1622931315.7545648-UTR-H-elongata_contig9177:7307..79551622931315.7545648-UTR-H-elongata_contig9177:7307..7955Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9177 7308..7955 +
1691679786.3830025-UTR-H-elongata_contig9177:7307..79551691679786.3830025-UTR-H-elongata_contig9177:7307..7955Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9177 7308..7955 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931315.6455462-CDS-H-elongata_contig9177:4205..42681622931315.6455462-CDS-H-elongata_contig9177:4205..4268Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 4206..4268 +
1691679786.3092825-CDS-H-elongata_contig9177:4205..42681691679786.3092825-CDS-H-elongata_contig9177:4205..4268Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 4206..4268 +
1622931315.6625073-CDS-H-elongata_contig9177:4833..49111622931315.6625073-CDS-H-elongata_contig9177:4833..4911Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 4834..4911 +
1691679786.3182583-CDS-H-elongata_contig9177:4833..49111691679786.3182583-CDS-H-elongata_contig9177:4833..4911Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 4834..4911 +
1622931315.6812422-CDS-H-elongata_contig9177:5164..52421622931315.6812422-CDS-H-elongata_contig9177:5164..5242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 5165..5242 +
1691679786.3277497-CDS-H-elongata_contig9177:5164..52421691679786.3277497-CDS-H-elongata_contig9177:5164..5242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 5165..5242 +
1622931315.6999993-CDS-H-elongata_contig9177:5946..60511622931315.6999993-CDS-H-elongata_contig9177:5946..6051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 5947..6051 +
1691679786.3383954-CDS-H-elongata_contig9177:5946..60511691679786.3383954-CDS-H-elongata_contig9177:5946..6051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 5947..6051 +
1622931315.7161179-CDS-H-elongata_contig9177:6528..66421622931315.7161179-CDS-H-elongata_contig9177:6528..6642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 6529..6642 +
1691679786.3538325-CDS-H-elongata_contig9177:6528..66421691679786.3538325-CDS-H-elongata_contig9177:6528..6642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 6529..6642 +
1622931315.7392323-CDS-H-elongata_contig9177:7247..73071622931315.7392323-CDS-H-elongata_contig9177:7247..7307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 7248..7307 +
1691679786.3657448-CDS-H-elongata_contig9177:7247..73071691679786.3657448-CDS-H-elongata_contig9177:7247..7307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9177 7248..7307 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9177.16633.1prot_H-elongata_contig9177.16633.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9177 4206..7307 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9177.16633.1

>prot_H-elongata_contig9177.16633.1 ID=prot_H-elongata_contig9177.16633.1|Name=mRNA_H-elongata_contig9177.16633.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
MEREEQERIAERKARIANVLEEKAAAEEDPSAGSIPEVVSNRMLKRMVPF
FLLPALGGVGVFVAVYVLSKNYEYTIPAYIVAYITQAPFLVALLGITYAI
LSSSWDEDREGTFLGFEEAKRNVGNIYDGLKRSSDRMDVEDMIADEEARK
ANRYQRRQMRKTDDK*
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mRNA from alignment at H-elongata_contig9177:311..7955+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9177.16633.1 ID=mRNA_H-elongata_contig9177.16633.1|Name=mRNA_H-elongata_contig9177.16633.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7645bp|location=Sequence derived from alignment at H-elongata_contig9177:311..7955+ (Himanthalia elongata Himel1 dioecious)
CTCGGTTTCCACGTCACGCCCTCAGAGGCTTGCACCAAGACAGCTGTTCA
AGAACGATGGCAGCAGCCACAGCAGCATCGGCAGGGTTCCAGTAGCAGCG
AATGTCTATCACAAATATCGGCGTGTGTTGCGTCGGACCCCTTCGCTAGC
TCATCGCGAGGCCGTAGAAACGTTGTACTATTAGCTGTAACGGAGGGTGA
TGGCGATAACGGTGGCCGCGGCGAGGGGTTTAACCCTCCAGGAGAAAAGC
TGTCGCGAAGGTCGGCGAAGAAGGCCAAAGCTAGACGCGGAGCGCCCACG
ATTCCTTTAAACAAAAAGACGACTCCAGCAGAGCTGTCTCAGGAAGTGAG
CAAGTCCGTGGTGGCGGAGGTTTTGGGTGGCCAGGATGCTGGGCGTGGTT
CATCTTCGAACCAGCTCGCTGCCAGGTGAAGAGGAGCGCATGATCGACAT
CATGTTGAAAAAATATGAGCTCATGTTGAAGATCATAGTCAAATTATTAG
TCTAATATCAATACTAGCGTAGAGCGGGTTGCCGCCTGCACAATCATGCG
CAAGCTTGGCGCTCGATCTCTCGAGTTGTTGGTCTCACACTACTGTACGG
TTGAATTGGCGACACCTTGTTCTTGGAAGATTATAAGATAACACGTCCTA
AGGCTGATTGTGATAGGGGGTGGGGGTACGAATACCGCAGTGTGTGCAGT
ACATTGCTTAGCACTGAGAGATGCCTGAAAACACTATTAATAGTAATAAT
GTGTTTAGTCATCACATAAGCTCTTTAGCAGTATATACTAGTATAGTATA
GACTTTAGTATGGATCAACCGGATATGGTCGCCAATCCTTCTCGTGGTCA
GCTGAAGAGGAAAATATATATTTCCCTGTCCCCGTTCACGCCTGAGAAAT
TGGTCTCACGAAACGGGTTCCGCCGCCCCTTCCCGCGTCAGCCCACTTAT
CCTACCAACCGAGACTGAATCTGGTGCTTACTCCCGGGATCCTCTCGGTC
CTCTCCCTTTCTGCGACGGCGTCCATCTCTACCGTCAACCGCCATCGGGT
CGATTCCGAGTTCATCAGGTCGCGCAATTATGTATTGATAGTGTTTACCA
CCGAGAGTCCGCCGGCATTGGAGCAGTATTCCTCGAGGTAACTTGAGTAG
CGGGTGCATCCTATTCAGGTAACCCAAAGGACCAATTATTGTGCGTCTCT
CTCTTCCCACACTCACTACTGGTACAGTGGACATATGCGATACAGATCCA
TACTTGATCGATTGATTAAATAGAACGTTTTATCAGGCCCCGATGTTGGT
CTTCCTCGCGTACCCTCGCGCGAATAGTGCGATCCTCCGGACAACCTTTT
TCACAACCCGCTAATACTGTAAGCAGATCAGTTCTTAGCTTGGGACCATC
CTGGTCTTTTCTGGCCCATGATCCGTTCGTGTTGCTCCCCGGCATGTGTG
ATTCTCCAAACAATTGTGAGGTTGCGGGTGGTACACGGTGGGGAGAGAAA
CGACACGCTAGTAATTGTAAGAGGGAGTTTTCCCTCTGTACTTTTATACT
TTATTTCTTTGTCGGAGACATACCTTTGCGTGAAGTGCTTTTTTTCTTCC
AAACTCTACATTTTTTTGTCTATTAAATAGTGTAAAAGCACTGGGCAACC
TATTATTTCCATTTTTTTTATCTCCGCTGATCACTGACCACGAGCGGGAC
TGTACTGGGACCAAACGCTAAACTTCCAAATTCAATTTTATTTAAACCAA
TCCAAGCCGAAATTATGTGCGGGTAAGACCCGCCGCGTCAATGTATACCG
AGAACGTGCCGCTTGTTCTCGGAAGGAGAAAGGTCACGTCCGGTGGTAAT
GTTCCAATGTGACCTGGATGCTCTAAACCAATCGAATTTCCTGAAGCCAA
TATACTAGAGTGCCCATGAAGCTGATGCTAGACGACGTGTCTTGGAAAAC
GAAGAACCGCCGAGGACCGCAGGAGGTTTGAAGATTTGGTAATGTTCCAG
AGCTCGAACGGCAGATTCCCCGCGGAACCACATCATCTGCTGCCTCACCC
GCGAGAGACGACGCCGTTGTCACGGTGCTCTCGGCCCCAGCTGTCTTGTC
GTTCTAATACATCTTCCTTTGATAGCGACGCGGTCAACGGGCAACCACTC
TGTCGATATTTTGAAAAGGGGACATAATTGACCGACCATAAGTCACGTGC
GGCCGAGAGCACCAGCATAATAGCATCGTCTCTCATTGGGCGCTCTTGCC
CGCGGAGCAGCAGATGGTGGTATTCCACTGAAGCTTTTTGGGTCGAGGCC
AGGAATATTTATGAAGTCTTGAACCTTCCGCGGTTCTCGACGACTGCAGA
GTCCTGCCCCCCACACTCGGCCCCGATGGTGGTTCTCTTGCCCGCCACCT
AGGACACGCCACTCAGCATCAACTTCATAGGCGCTGTCCGTAGTTTGTAT
CAGACAAGTGAATTGATTTTGTCAATACAAGGTCCAGTTCACCACAAGAT
ATTGGTCCTGGCCACCCCCCTCCTACCTTCCAACACCAGATTGCGTGGAT
TCGGTTAACGTCGACACGACGATGGGTCTCTTCCGCGCAGAAGCTCGCCA
GCGTTTTCATCGCTGCCCCCGATGAGTTGGAGTTACCAGACATACGGCGA
GAAGGCCATGATGCTTTGGGTGTTAATCGACCTTCTGCTCGGGAACCGAG
ATTATAAACATGAGTCACAAAACATGGAACCCACGCAAGGAGGCACAAGA
GTTTCCGCGGAGTTGCAGAATCATCCTCGTGTTTCTACACTATTTACACA
GTGTAACCGCCGTCCGACTGTGCCTAGGCTCAAGCAGGGGTAGCAGGCGG
ATGTAACCACCCGCGCGAACACGATCCACGACGATAATATGATTCCGTTT
CTTACACCGCGGTCCGGCTTCCCCGAAGCTGTTGGTCGCGGATCACAGCC
CTCTCGTGCTCCCCTCGCCGGCTCTCTAGAGGTATTTCCCGTCTTGAGAC
TCCCGTGGAGATGACGTCAGGTTCTTGCAATGCTACTACGTAGATGGGGA
TTTTTTTTAGTGGGGGGTGGCTGCTAGCTACTCTCTTGTTGTCCTCAGAA
TCCTGAAAGCTTGACAAGGTCCATATTCCGAAAACCAATTGTGGCAGACC
GATGCATGTATTGATATTGTCGATTGTCGTTGGGCAGGCCGAGTGGCGAG
TGATATGCTGCTACGGGACGGTGATGTGGGTTGTGCCTCAGAGACGAGAT
GTGTTGCTCGTAGTATGCGGGGGATGAAGGGGGGCTAAAAATCTTACTAC
ACGAAACAGATCCAAGCAATGTGTGGCTCGCCGAGTTTTTCCTAAAACCG
CGGCATGCTCCCACAGAACTACATCTTCATATTTTGTTGTGCCGCTACTC
TACGCTGGGCTGAGCCCCTCCCCCTACCCCCCGCCGAGAATCAACCCTCT
GACGGGGCAAATCATGGCTGAAATCAATCGAGTAAATATCTATATTACCG
CCCTCGATTTTCTGTAGGTCTGAAAACGAGTAAATATCTACATTATCCCC
CCCCCCCCAACAACAGAATAGAGCAAAGCAGCGCAAATTGGGTATCTTGC
GCGGGTGCCTCAACCAGAGGTTCCTGCGGTTCGATGCCCACCGGCGGGTT
TTGAGGAGGGTACAGGACCCTATTCGGCGTGCGATGCGTCCCACGTAATA
CATGGGTGTGCGTTTTCAATCCTCTACTCAAGCGCGCACACACACAGTGG
CACCTTATTTCTAAGTGACACTTTGTTTCCACCGGAGCGAAGTGTATGAA
ATTCGGCTTGAAGCGTCATGGAAATGGTCGTGTCGTGTGTCGGTTTTGTA
TGCCGTGCTGTGCTGACTGAATGCCGCAGGGAAGCAATTGAAAAGATGGA
GCGAGAGGAACAGGAGCGCATCGCCGAGCGCAAGGCTCGCATTGCCAACG
TCCTGGAGGTGGGCCAGTTTAGGGGCGGTACAGCGTACATATTCGCGATA
ATGGTTCCCTCGTGTCAAGTGTCTGTGTGTGGGGGAGGGGCGGTCTGAGC
GGATCTCTCGATACGGTTTGACTAGGTGCCGTTTCGCACTCGAGCATTTC
ACGAGACGCTGGCTGAAGAGTTTAGGGGGTTTTTCCCCACTGGCAAAGAT
GATCTGCGCACCGTATACCGTGCGCAGATAGCATTATAATAGTGGTATAG
GTAGATCTCCGTAGGAAAGATCATTGAGCGGTTCGCGCTGTCCCTCTTGT
ATGTCCTGGAACTCCCTATTATAGTCCTGTTATGGTTAATGGCAAGGAGA
GGAACACCAAAAAAGAGAGAGTTCGTGTCCCGACCGACACCTTGGTTTTT
TCCACATCGTGGCGGCAGACCATCTAAGAGTGTTCTATAGAGCAAACAAG
AAGACGTCTCCCGGGAGATGTTTTTTCTTGAGCTGATGATTCCACCGATT
GGGGGCCCGGGGCGGGTCTGCCCGACCTCCCACCCCCGCTGGATTGAACT
AAATTATATGTTGACATTGTCAGGAGAAGGCAGCAGCGGAGGAAGACCCG
AGCGCCGGTAGCATCCCGGAAGTGGTGTCCAACCGCATGCTGAAAAGGAT
GGTGAGGCGTTTTGTAAGGCCCGCACTGGACCGACCCTTTTTGTTCAGTT
AGTATTATTATTGTTATTGATATTAGGAAGCCGCCCGCTCACTTTCGAGG
GGTCTTAAACTCTGGTCTATGAAACAAACATGACAACAGCCTTCTGACTT
TGTGTGTAAAGACGGAGCCAATCGGAGGGAATGGAGGCATCACCTAAGAC
ACATTTTGGTCTCAAACCAAGTCACTTCCCACGCTGGCTCGCTTGCTCTT
ACAGGTTCCATTCTTTTTGTTGCCAGCGCTGGGCGGTGTTGGAGTCTTCG
TCGCGGTGTACGTCCTCTCCAAGAATTACGAGGTTTGGGCCTGGATCCCC
CGCCCCCCCCCGCGCTCCCGACCGTTTGATGTTGTATCTGGTGCCCACCC
TCGATTTTATTTCCTGCTCCGACTGTTCAGCAGACTGCAAGCGGGAGCTC
TTAACCACCGCGTGCAGCAGTAATGTACGTATCTTTACACCGCACATAAT
ATACTTTTGGCTGAAGGTGAGATAATAACAACAGCGGGGAACACCGCCCT
TTTCTCCAAGCTGGGATTTGGCGCGCCTTTTCGGCCCTGAGCGAAGGTAT
CGGGAAAAGGCGACGGCGCTCAGGGCGAGGACGACCGTGCCTCGAGAGAG
ATGCTCTCTGTGAACGCTAACTTCGACGGACGGCCTTCACCTGATGGAGC
GCAGCCTCAACACGCGAAATTCGATTCGCTATTCCGCTTGTTTTACCTGT
TACAATACTAGTATTTTGGCCGTCAAACACTGCGCGTATAGTGTAGTATA
GTATAGTATAGTACAGTACAGTATAGTATAGTATAGTATAGTAAAGTACA
GTACAGTACCAAAGTTGACAGTGGTTTGTTAGTTTTATCGTCTCGATCGA
GCCACATCTGCGCGCACGTAGGCAGTTATGTTCTGGGAGCGAGATTACGC
ACAAAACTGAAGATTCACGTCCCCCCCTGTCCCCGCCTGTCACGTTTTGT
GCAAGTCCCCCCCCCCCACACCAAAACAATGAACAGTACACCATCCCCGC
GTACATCGTGGCTTACATAACCCAAGCCCCGTTCCTGGTGGCGCTGCTGG
GTATCACGTACGCCATTCTGTCCTCGAGCTGGGACGAAGACGTGAGCGTG
GAATGGAAGCGCCCGTGGCTGGCCGCGGGCAAGGAAGAGACCCAATATTT
TTGGACGATCGTACTATCTTAGCATGGAAGTGATATTTTCCACCTATTTT
TTTTTTAGTTTGTTCGTTTGACCATACCATCCACAAAACAAAATTCCGCG
TGGATTTCTTTTATGCGATCGTTGTTGTCCCCATCACTTTCATCTCGTTT
TTTGTGAGAGAATAGCCGCCCATTCGTACGAGATGAGTGCCTTGACGCTC
CGAGGCCTTCCGTTTTTCATCGAGCTCCATATAGATACCGCAGCGGCAAA
ATCATCTTGCACCACGGGCGGACGATCCCCGATCGTTGGAGCGCGCTACT
GCACCTGATGTTAAACGGAGTGTCACCGCGTTTAACTATGTCGCCATACC
CCTGACCGCAGTCGCCTTCCTCGTCTCCACGAAACCTTCCTTCGCCCTGT
GCCACTTGTGTTTTTTAGAGGGAAGGTACATTCCTCGGCTTCGAGGAAGC
AAAACGCAATGTGGGCAACATTTACGACGGGTTGAAGCGCTCGTCTGACA
GGATGGACGTTGAAGACATGATCGCGGACGAAGTACGTCTTCTAGCATCT
GCCCCTTTTTGAATGTAGCTCCCTCTCGAAACCATGTATCTAGTACCAGT
TTGTTGTATGTGTACCCTTAACACAGTAAGCGTTGTGTTCACAACGCCCC
GAGAGGCAGCCTTCGGAACAGCGCGCGAGTTTTTCTGACGTCATTCCAAT
AATACCGCGTGGTCGTTCTCTTTCGTGAACATCCCACGGTTTGACAATTT
CCTTAAAACACCAGAAAAAATCCACCACCCTAAAAGATCTGAACTTTCGG
ACTCTTGCAGCAGCAGTGTCGTAAAGCGAATAAAAAAAACACACCAGCAA
TTATCTTGCGCAGCATCCCTGTCCTCCCTGGCCGCGGAAATATCTATTCT
CCGTTGCGACCTGCTTAGACGATACCCCTCGGTAACTTTTTTCTGTTCTC
TTTCACCCCCCTCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ACCCCACCATCACACCACCGCCCCCCCACAGAAGCGCGCCCGACAGACNN
NNNNNNNNCCCCCTTAGACGCATCCCCCCGGGAACTTTTTTTTTTTTCCT
TTCCCCCCCCCCCCCCCCCCCCCCCCCCCCATTCCAGGAGGCCCGTAAAG
CGAATCGATACCAGCGGCGCCAAATGCGGAAGACGGACGACAAGTAGCGG
GAGGGGGTAAAGGGTTATCGCTTCTTCGGAAAAGTGATTCGTTCGGCTGT
GTGATAGTCTTGAGCGCGGAGGGTCAACCAATTTGTAGCCGCACGGCGTG
CAGTAAATTGTATTACAATTAAGTAAGGCGCCTGGAAAATAGCGTTTCTG
AAAGGTAGTGGCGTAGCACGTTAGCGCGCGCGCGCGTGTGTGTGTGTGTG
TGTACCAGGTACTTTTTGAATTGTACATAATAATTAATATCCCCGCAATT
TGTCCATTTCATGCTATAGCCAATGTAAGGTACTCGTTTGGTTCTTCATA
TCATTATTAACCAATCTCAGTGGCGTGTCATCGGAGGGTGGTAGGCTTTT
GTATTTTGATTTGCGTACAGTGGCCTGTAGCTGCGAGCGATATCAGCAAC
GCACCACGACAAAGGCATGCACAGCGATAGAGTAGACTGTTCAAAACGTC
AACGCAGCAGGACAACGACTAGAGCATGCATGCCTGCAAATTATTTTACT
TCCATGGGGGTGTGATGGGGAGGCTATCACGTATAAATATATAATAAAAA
TTCCGTCAGCTAAGGACGCGACGGAAAGTTTTTCGAGACGAAGTTATTGC
TCTACACAGCGAATAATATGGCGACCTGTACATACTTTCGAGCCG
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Coding sequence (CDS) from alignment at H-elongata_contig9177:311..7955+

>mRNA_H-elongata_contig9177.16633.1 ID=mRNA_H-elongata_contig9177.16633.1|Name=mRNA_H-elongata_contig9177.16633.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=996bp|location=Sequence derived from alignment at H-elongata_contig9177:311..7955+ (Himanthalia elongata Himel1 dioecious)
ATGGAGCGAGAGGAACAGGAGCGCATCGCCGAGCGCAAGGCTCGCATTGC
CAACGTCCTGGAGATGGAGCGAGAGGAACAGGAGCGCATCGCCGAGCGCA
AGGCTCGCATTGCCAACGTCCTGGAGGAGAAGGCAGCAGCGGAGGAAGAC
CCGAGCGCCGGTAGCATCCCGGAAGTGGTGTCCAACCGCATGCTGAAAAG
GATGGAGAAGGCAGCAGCGGAGGAAGACCCGAGCGCCGGTAGCATCCCGG
AAGTGGTGTCCAACCGCATGCTGAAAAGGATGGTTCCATTCTTTTTGTTG
CCAGCGCTGGGCGGTGTTGGAGTCTTCGTCGCGGTGTACGTCCTCTCCAA
GAATTACGAGGTTCCATTCTTTTTGTTGCCAGCGCTGGGCGGTGTTGGAG
TCTTCGTCGCGGTGTACGTCCTCTCCAAGAATTACGAGTACACCATCCCC
GCGTACATCGTGGCTTACATAACCCAAGCCCCGTTCCTGGTGGCGCTGCT
GGGTATCACGTACGCCATTCTGTCCTCGAGCTGGGACGAAGACTACACCA
TCCCCGCGTACATCGTGGCTTACATAACCCAAGCCCCGTTCCTGGTGGCG
CTGCTGGGTATCACGTACGCCATTCTGTCCTCGAGCTGGGACGAAGACAG
GGAAGGTACATTCCTCGGCTTCGAGGAAGCAAAACGCAATGTGGGCAACA
TTTACGACGGGTTGAAGCGCTCGTCTGACAGGATGGACGTTGAAGACATG
ATCGCGGACGAAAGGGAAGGTACATTCCTCGGCTTCGAGGAAGCAAAACG
CAATGTGGGCAACATTTACGACGGGTTGAAGCGCTCGTCTGACAGGATGG
ACGTTGAAGACATGATCGCGGACGAAGAGGCCCGTAAAGCGAATCGATAC
CAGCGGCGCCAAATGCGGAAGACGGACGACAAGTAGGAGGCCCGTAAAGC
GAATCGATACCAGCGGCGCCAAATGCGGAAGACGGACGACAAGTAG
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